BAC Information

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BAC

Clone NameB6Ng01-322A12
Chromosome14 (Build37)
Map Location 32,024,700 - 32,180,912
singlet/doubletdoublet
Overlap geneTnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7
Upstream geneCacna1d, LOC665399, Dcp1a, Tkt, Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch
Downstream geneSh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322A12.bB6Ng01-322A12.g
ACCGA110982GA110983
length1,1371,037
definitionB6Ng01-322A12.b B6Ng01-322A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,179,756 - 32,180,912)(32,024,700 - 32,025,735)
sequence
gaattcaggctgtcagacttggcagcagacaacctttatctactgagcca
tctcaccagcccatgggctaagttttcaatttgtgtctcctgtttattct
ttcattaatggagagcaaaactacctagtgtgatgaaaataaaactgtac
cctagaagtatcctgaaaaaaattcacagaaaagagggcagcactgttca
attaagaaaacataagaaaaaataaacttaagttttaaaagtaaaagtag
tagtaaatgtatttcaaagtataaaaccatgtaaaattttcactctagga
aaatatttgtgtggttttttttgtttttttttttttagttatataatgat
caacatttgaaaatagctagcttggcttggtatggcccactggacttcat
gtgtcatgtgtctgcagaagtgagagagactgactggtgaggctcagtgc
ctgtgctgaccagtgtaatggtgaagaatgcatcttttcctttatgacca
atcctctccagtcctaccttcctgacaaccttttctcaacaatcaaggtc
aacaatgattacacgatgctaagtccaacggcatcttctctgaccccttg
gagagcaggagatagaggtgtgctcttttcctctcctttgctaagattct
atcaagcctcactgtaccatcaattgcttcatcacatcctgactgagttt
tctagtaacagtaccaactcctctgcccagctacagatgcacgtcctggg
catccagctctagctgtggctttcctcaggatttacagagtccaggcttc
agatgctgcctcctcctgtgcctgactcatcaagctggacctcaagcccc
cactcaaatcaatgcccacttggcatccttacccggaagtcttagtgcct
caaatctaacaagccaaaattaacttccgagtttactctgtaacgaaatc
tacatatgaccatgctcacccatcttaataactactacagcttggtttac
ttaaaccccagatcagcctcatcagctcagactccttgtacatctactga
atcaatctgtcctctgtcttactcttacactaccaagtcagtcaccagcc
atttctcaataaacctgctcatttgggcctgttataa
gaattcatgaagggtgtggagtagatgctggtcttgcacggttgcctgcg
cctgttctccccctccacccagaccccgtggtaggagtgcagctgggctc
tctagactctgagcctgcctgtgtccttgaaccttggcccttccggactt
tctctccccattcctgtcctggggaacgcaaataaatccttgctccccag
aggcctggtatcttgctctggttttcctggggtcacagtcttttctcggg
gttccctcttgcctgatgacaccatccctgtcaggttggctgcagagtct
gtattctgactgctcaacccaccttctgccagagactttcatcaggtccg
agacatcgtgctctgtacccctgataactaggccctgctgtagccccaga
gcctgtattctaagaagctcctggaactcatgaaaggtgtagagtagaca
tttgaccggcattcagagttgtccattcccacttcctcactggggaggta
aggggtggtgaactgccaggctcagccagtagtcagccgacagatactct
ctcaggatgggaacagctagttcagagggcactgggtgctccttggcaca
gcaacctctccatcctgtttggaatgaagctaaacctcctgaaacccagc
aggcttacagcactgtcgtccctctaccttgtggctttttacaggaatat
tgactcccggcctatggagaacttgtagtttgctctaccctctagcattc
attctacagacgaggaccccatgtctcagacagccaaggtcacctggcaa
atttgcaggagaaccccattaccttgcagccaaccaaggactctgacaga
cctggttcaaatggacctactgtctagttcctttgaccctctgaggctgg
cctccagtcacctacctggtctttcttcctgacaggaaataaaggcctaa
aggtctggtgacatccccagcttacagtggtatgagggggaaggtggggt
gcagcagtcagagctgcagctagaacagtgactaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32179756_32180912
seq2: B6Ng01-322A12.b_47_1183 (reverse)

seq1  TTATTACAGCCCCAAATGAGGCAGTTTTATTTGAGAAAT-GCTGGTGACT  49
      |||| |||| ||||||||| |||| |||| ||||||||| ||||||||| 
seq2  TTATAACAGGCCCAAATGA-GCAGGTTTA-TTGAGAAATGGCTGGTGAC-  47

seq1  TGACCTTGGGTAGTTGTAGAGTAAGACCAAGAGGACAGATTTGAATTTCA  99
      ||||  | ||||||   ||||||||||  |||||||||| ||||  ||||
seq2  TGAC--TTGGTAGTGTAAGAGTAAGAC--AGAGGACAGA-TTGA--TTCA  90

seq1  GTAGGATTGTACAAGGAGTTCCTGAGCTGATGGAGGCTGATTCTGGGGTT  149
      ||||   ||||||||||||  |||||||||| |||||||| |||||||||
seq2  GTAG--ATGTACAAGGAGT--CTGAGCTGAT-GAGGCTGA-TCTGGGGTT  134

seq1  TAAGTAAAACCAAGCTGTAGTAGTTATTAAGATGGGTGAGCATTGGTCAT  199
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAGT-AAACCAAGCTGTAGTAGTTATTAAGATGGGTGAGCA-TGGTCAT  182

seq1  ATTGTAAGATTTCGTTACAGAGTAAACTCGGAAGTTAATTTTTGGCTTGT  249
      | ||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  A-TGT-AGATTTCGTTACAGAGTAAACTCGGAAGTTAA-TTTTGGCTTGT  229

seq1  TAGATTTGAGGCACTAAGACTTCCGGGTAAGGATGCCAAGTGGGCATTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGAGGCACTAAGACTTCCGGGTAAGGATGCCAAGTGGGCATTGA  279

seq1  TTTGAGTGGGGGCTTGAGGTCCAGCTTGATGAGTCAGGCACAGGAGGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGGGGGCTTGAGGTCCAGCTTGATGAGTCAGGCACAGGAGGAGG  329

seq1  CAGCATCTGAAGCCTGGACTCTGTAAATCCTGAGGAAAGCCACAGCTAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTGAAGCCTGGACTCTGTAAATCCTGAGGAAAGCCACAGCTAGA  379

seq1  GCTGGATGCCCAGGACGTGCATCTGTAGCTGGGCAGAGGAGTTGGTACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGCCCAGGACGTGCATCTGTAGCTGGGCAGAGGAGTTGGTACTG  429

seq1  TTACTAGAAAACTCAGTCAGGATGTGATGAAGCAATTGATGGTACAGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAAAACTCAGTCAGGATGTGATGAAGCAATTGATGGTACAGTGA  479

seq1  GGCTTGATAGAATCTTAGCAAAGGAGAGGAAAAGAGCACACCTCTATCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGATAGAATCTTAGCAAAGGAGAGGAAAAGAGCACACCTCTATCTC  529

seq1  CTGCTCTCCAAGGGGTCAGAGAAGATGCCGTTGGACTTAGCATCGTGTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCCAAGGGGTCAGAGAAGATGCCGTTGGACTTAGCATCGTGTAA  579

seq1  TCATTGTTGACCTTGATTGTTGAGAAAAGGTTGTCAGGAAGGTAGGACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTGACCTTGATTGTTGAGAAAAGGTTGTCAGGAAGGTAGGACTG  629

seq1  GAGAGGATTGGTCATAAAGGAAAAGATGCATTCTTCACCATTACACTGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATTGGTCATAAAGGAAAAGATGCATTCTTCACCATTACACTGGT  679

seq1  CAGCACAGGCACTGAGCCTCACCAGTCAGTCTCTCTCACTTCTGCAGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGGCACTGAGCCTCACCAGTCAGTCTCTCTCACTTCTGCAGACA  729

seq1  CATGACACATGAAGTCCAGTGGGCCATACCAAGCCAAGCTAGCTATTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACATGAAGTCCAGTGGGCCATACCAAGCCAAGCTAGCTATTTTC  779

seq1  AAATGTTGATCATTATATAACTAAAAAAAAAAAAACAAAAAAAACCACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGATCATTATATAACTAAAAAAAAAAAAACAAAAAAAACCACAC  829

seq1  AAATATTTTCCTAGAGTGAAAATTTTACATGGTTTTATACTTTGAAATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTCCTAGAGTGAAAATTTTACATGGTTTTATACTTTGAAATAC  879

seq1  ATTTACTACTACTTTTACTTTTAAAACTTAAGTTTATTTTTTCTTATGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTACTACTTTTACTTTTAAAACTTAAGTTTATTTTTTCTTATGTT  929

seq1  TTCTTAATTGAACAGTGCTGCCCTCTTTTCTGTGAATTTTTTTCAGGATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTGAACAGTGCTGCCCTCTTTTCTGTGAATTTTTTTCAGGATA  979

seq1  CTTCTAGGGTACAGTTTTATTTTCATCACACTAGGTAGTTTTGCTCTCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGGTACAGTTTTATTTTCATCACACTAGGTAGTTTTGCTCTCCA  1029

seq1  TTAATGAAAGAATAAACAGGAGACACAAATTGAAAACTTAGCCCATGGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAAGAATAAACAGGAGACACAAATTGAAAACTTAGCCCATGGGC  1079

seq1  TGGTGAGATGGCTCAGTAGATAAAGGTTGTCTGCTGCCAAGTCTGACAGC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGATGGCTCAGTAGATAAAGGTTGTCTGCTGCCAAGTCTGACAGC  1129

seq1  CTGAATTC  1157
      ||||||||
seq2  CTGAATTC  1137

seq1: chr14_32024700_32025735
seq2: B6Ng01-322A12.g_67_1103

seq1  GAATTCATGAAGGGTGTGGAGTAGATGCTGGTCTTGCACGGTTGCCTGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAGGGTGTGGAGTAGATGCTGGTCTTGCACGGTTGCCTGCG  50

seq1  CCTGTTCTCCCCCTCCACCCAGACCCCGTGGTAGGAGTGCAGCTGGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTCCCCCTCCACCCAGACCCCGTGGTAGGAGTGCAGCTGGGCTC  100

seq1  TCTAGACTCTGAGCCTGCCTGTGTCCTTGAACCTTGGCCCTTCCGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTCTGAGCCTGCCTGTGTCCTTGAACCTTGGCCCTTCCGGACTT  150

seq1  TCTCTCCCCATTCCTGTCCTGGGGAACGCAAATAAATCCTTGCTCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCATTCCTGTCCTGGGGAACGCAAATAAATCCTTGCTCCCCAG  200

seq1  AGGCCTGGTATCTTGCTCTGGTTTTCCTGGGGTCACAGTCTTTTCTCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGTATCTTGCTCTGGTTTTCCTGGGGTCACAGTCTTTTCTCGGG  250

seq1  GTTCCCTCTTGCCTGATGACACCATCCCTGTCAGGTTGGCTGCAGAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTCTTGCCTGATGACACCATCCCTGTCAGGTTGGCTGCAGAGTCT  300

seq1  GTATTCTGACTGCTCAACCCACCTTCTGCCAGAGACTTTCATCAGGTCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGACTGCTCAACCCACCTTCTGCCAGAGACTTTCATCAGGTCCG  350

seq1  AGACATCGTGCTCTGTACCCCTGATAACTAGGCCCTGCTGTAGCCCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCGTGCTCTGTACCCCTGATAACTAGGCCCTGCTGTAGCCCCAGA  400

seq1  GCCTGTATTCTAAGAAGCTCCTGGAACTCATGAAAGGTGTAGAGTAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTATTCTAAGAAGCTCCTGGAACTCATGAAAGGTGTAGAGTAGACA  450

seq1  TTTGACCGGCATTCAGAGTTGTCCATTCCCACTTCCTCACTGGGGAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCGGCATTCAGAGTTGTCCATTCCCACTTCCTCACTGGGGAGGTA  500

seq1  AGGGGTGGTGAACTGCCAGGCTCAGCCAGTAGTCAGCCGACAGATACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGTGAACTGCCAGGCTCAGCCAGTAGTCAGCCGACAGATACTCT  550

seq1  CTCAGGATGGGAACAGCTAGTTCAGAGGGCACTGGGTGCTCCTTGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATGGGAACAGCTAGTTCAGAGGGCACTGGGTGCTCCTTGGCACA  600

seq1  GCAACCTCTCCATCCTGTTTGGAATGAAGCTAAACCTCCTGAAACCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCTCCATCCTGTTTGGAATGAAGCTAAACCTCCTGAAACCCAGC  650

seq1  AGGCTTACAGCACTGTCGTCCCTCTACCTTGTGGCTTTTTACAGGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTACAGCACTGTCGTCCCTCTACCTTGTGGCTTTTTACAGGAATAT  700

seq1  TGACTCCCGGCCTATGGAGAACTTGTAGTTTGCTCTACCCTCTAGCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCCGGCCTATGGAGAACTTGTAGTTTGCTCTACCCTCTAGCATTC  750

seq1  ATTCTACAGACGAGGACCCCATGTCTCAGACAGCCAAGGTCACCTGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAGACGAGGACCCCATGTCTCAGACAGCCAAGGTCACCTGGCAA  800

seq1  ATTTGCAGGAGAACCCCATTACCTTGCAGCCAACCAAGGACTCTGACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGGAGAACCCCATTACCTTGCAGCCAACCAAGGACTCTGACAGA  850

seq1  CCTGGTTCAAATGGACCTACTGTCTAGTTCCTTTGACCCTCTGAGGCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTCAAATGGACCTACTGTCTAGTTCCTTTGACCCTCTGAGGCTGG  900

seq1  CCTCCAGTCACCTACCTGGTCTTTCTTCCTGACAGGAAATAAAGGCCT-A  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTCCAGTCACCTACCTGGTCTTTCTTCCTGACAGGAAATAAAGGCCTAA  950

seq1  AGGTCTGGTGACATCCCCAGCTTACAAGTGGTATGAGGGGG-AGGT-GGG  997
      ||||||||||||||||||||||||| ||||||||||||||| |||| |||
seq2  AGGTCTGGTGACATCCCCAGCTTAC-AGTGGTATGAGGGGGAAGGTGGGG  999

seq1  TGCAGCAGGTCAGAGCTGCAGCTAGAACAGTGACTAGGG  1036
      ||||||| |||||||||||||||||||||||||||||||
seq2  TGCAGCA-GTCAGAGCTGCAGCTAGAACAGTGACTAGGG  1037