BAC Information

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BAC

Clone NameB6Ng01-322F12
Chromosome14 (Build37)
Map Location 43,157,327 - 43,282,652
singlet/doubletdoublet
Overlap geneLOC100042031, EG666318, EG546249
Upstream geneLOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298
Downstream geneLOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322F12.bB6Ng01-322F12.g
ACCGA111207GA111208
length1,1751,172
definitionB6Ng01-322F12.b B6Ng01-322F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,281,497 - 43,282,652)(43,157,327 - 43,158,496)
sequence
gaattcaggctatgtcctggactaccatcatgcagtggctgccacagtct
gcctcctatatactgagaccttctggtgcttattaaactcagtatcctga
tgccaggacaacacaggttggggttccttagtaagggatcaagggcttca
agacctacctcatgggcctggaaggaaacccttctaaaaagttcccagga
agtctgtgccacagggtctcgcccacctcaaacctgttaccacttttttt
aaaaaatatatcttcagggggctggtgagatggctcagtgggtaagagaa
cccgactgctcttctgaaggtccagagttcaaatcccagcaaccacatgg
tggctcacaaccatctttaacaagatctgacgccctcttctggagtgtct
gaagacagctacagtatacttacatataataaataaataaatctttaaaa
atatatatttatcttcagaacacagattttcagttgtaggttcttattgc
tacacagcttcccagagcaaaataatcagtatttgcagggaggaaactca
atatcaggatggctatatataatcttcgcgggatttcaatgtgccaccaa
ggtgaacatatagacaaacagcagtgctgactaaggtggggttccctgtg
catggagacagcatcaccttgcaacaggccccactgaggactccagattc
caaggattcatagacccatgggggacacaagcacatacacacacacagac
atacagtcacacagagacacacacacaggcacacacatacaattggtcct
ctatgaggagtccatgtctgtaggcttttgctacactgcatcccttggtg
tatttctttaaggtccatggatgtctgatagcaaatatcaaagaaaagaa
tatacccctggacatatttcaagttctgagacatttactactttcatctt
agacacaggcaatcacagcttggtggtgcttaagcactagggaaatccag
gacttaccttgcatcaacatcagataactggctgacattgcccttcaaag
cacagcaatgggctggctagcttatgccattcagaagtcagtaggaactg
cagtatgtacttggaggttaccttgactagcacagggtttgggaaacgat
atatctttatctgaaacacagctgc
gaattctgtgtctggaactccaggaagcaagaatacctgtcctgagctgg
tgaaattttaaagctgtttttaataacaggaattacagagggctacagac
agaacagactgtttgctcttctgactatcatgagcctaaggggctgtctg
aggcagccctgttcttacacttcaccatacttatggccctttggcttggg
acagtctcaaatccaaacaactcaatctttcaaatcataacaccctgaac
aatctccaaagaagggagacaaaagagataaagaagcatagacaaagttg
gaaagaaaatggtagcaggcaaggatgaaaataaactaggatgccaagaa
gatgcaagaagacccctggtcctccactgtgcagtcactattcatgatgt
acagaaagggaactcaaaggcttagcccgcctttttcactctcagccaaa
tgggtttaacacagcaggctcattgctaattccaggtttcaccttccttt
cttttattacaaatgatttcatacagataagcacttttccctatacaaac
tcttcaaaatctgactttacaccatgtttgtctccatttgttctagtgag
ctaggtggagaggcatgatgaccagctgtttccccaatgcaaaatgaact
gacagagtacttttctcttttaagttgtcctctattatatcatttaaggt
gtttgctcacagagtgactatgtgaatatatacaatcaaatacgtacata
tgtgtacagagacacatgaatacgtgccttcacatatacatacacacaca
tataaaagaaaagaatacatgaatgaacagtactatatacttgcacctac
aacaagcagctaccattacataaatattacacataaacatgctcacaaac
acctgggcaaaacacatacacaaacaaagatatatatatacacacacaca
cacaaacacacacacacacacacacacacacacacactccccaatgaaaa
cactgctattattacagcacatttcctgacactggaggagtattaggacc
tgaagctgttgtatcgatttcttaagtaaccactggttgctggctgggac
tgtgcctgattcgttcagaacttttccatgcagatatttgctgcttccta
caaggttatgatattataaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43281497_43282652
seq2: B6Ng01-322F12.b_47_1221 (reverse)

seq1  GCAGCTGTTCTCAAGATA---GGATATCG-TTCCCAACCCCTGTGGCTAG  46
      ||||||||  |  |||||     |||||| ||||||| |||||| |||||
seq2  GCAGCTGTGTTTCAGATAAAGATATATCGTTTCCCAAACCCTGT-GCTAG  49

seq1  TC-AGGT-ACCTC--AGTACATACTGCAG-TCCTACTGGC-TCTGGATGG  90
      || |||| |||||  |||||||||||||| |||||||| | |||| ||||
seq2  TCAAGGTAACCTCCAAGTACATACTGCAGTTCCTACTGACTTCTGAATGG  99

seq1  CATAAGCTAGCCAGCC--ATGCTGTGC-TTGGAGGGCAATGTCAGCCAG-  136
      ||||||||||||||||   |||||||| ||| ||||||||||||||||| 
seq2  CATAAGCTAGCCAGCCCATTGCTGTGCTTTGAAGGGCAATGTCAGCCAGT  149

seq1  TATCTGATG-TGATGCAA-GTAAGTCCTGGA-TTCCCTAGTGCTT-AGCA  182
      ||||||||| |||||||| |||||||||||| ||||||||||||| ||||
seq2  TATCTGATGTTGATGCAAGGTAAGTCCTGGATTTCCCTAGTGCTTAAGCA  199

seq1  CCACCAAGCTGTGATTGCCTGTGTCTAAGATGAAAGTAGTAAATGTCTCA  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAGCTGTGATTGCCTGTGTCTAAGATGAAAGTAGTAAATGTCTCA  249

seq1  GAACTTGAAATATGTCCAGGGGTATATTCTTTTC-TTGATATTTGCTATC  281
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAACTTGAAATATGTCCAGGGGTATATTCTTTTCTTTGATATTTGCTATC  299

seq1  AGACATCCATGGACCTTAAAGAAATACACCAA-GGATGCAGTGTAGCAAA  330
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGACATCCATGGACCTTAAAGAAATACACCAAGGGATGCAGTGTAGCAAA  349

seq1  AGCCTACAGACATGGACTCCTCATAGAGGACCAATTGTATGTGTGTGCCT  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAGACATGGACTCCTCATAGAGGACCAATTGTATGTGTGTGCCT  399

seq1  GTGTGTGTGTCTCTGTGTGACTGTATGTCTGTGTGTGTGTATGTGCTTGT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTCTCTGTGTGACTGTATGTCTGTGTGTGTGTATGTGCTTGT  449

seq1  GTCCCCCATGGGTCTATGAATCCTTGGAATCTGGAGTCCTCAGTGGGGCC  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCATGGGTCTATGAATCCTTGGAATCTGGAGTCCTCAGTGGGGCC  499

seq1  TGTTGCAAGGTGATGCTGTCTCCATGCACAGGGAACCCCACCTTAGTCAG  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAAGGTGATGCTGTCTCCATGCACAGGGAACCCCACCTTAGTCAG  549

seq1  CACTGCTGTTTGTCTATATGTTCACCTTGGTGGCACATTGAAATCCCGCG  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGTTTGTCTATATGTTCACCTTGGTGGCACATTGAAATCCCGCG  599

seq1  AAGATTATATATAGCCATCCTGATATTGAGTTTCCTCCCTGCAAATACTG  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATATATAGCCATCCTGATATTGAGTTTCCTCCCTGCAAATACTG  649

seq1  ATTATTTTGCTCTGGGAAGCTGTGTAGCAATAAGAACCTACAACTGAAAA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGCTCTGGGAAGCTGTGTAGCAATAAGAACCTACAACTGAAAA  699

seq1  TCTGTGTTCTGAAGATAAATATATATTTTTAAAGATTTATTTATTTATTA  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTCTGAAGATAAATATATATTTTTAAAGATTTATTTATTTATTA  749

seq1  TATGTAAGTATACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCGTCAG  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTATACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCGTCAG  799

seq1  ATCTTGTTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  849

seq1  TCTGGACCTTCAGAAGAGCAGTCGGGTTCTCTTACCCACTGAGCCATCTC  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACCTTCAGAAGAGCAGTCGGGTTCTCTTACCCACTGAGCCATCTC  899

seq1  ACCAGCCCCCTGAAGATATATTTTTTAAAAAAAGTGGTAACAGGTTTGAG  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCCCTGAAGATATATTTTTTAAAAAAAGTGGTAACAGGTTTGAG  949

seq1  GTGGGCGAGACCCTGTGGCACAGACTTCCTGGGAACTTTTTAGAAGGGTT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCGAGACCCTGTGGCACAGACTTCCTGGGAACTTTTTAGAAGGGTT  999

seq1  TCCTTCCAGGCCCATGAGGTAGGTCTTGAAGCCCTTGATCCCTTACTAAG  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAGGCCCATGAGGTAGGTCTTGAAGCCCTTGATCCCTTACTAAG  1049

seq1  GAACCCCAACCTGTGTTGTCCTGGCATCAGGATACTGAGTTTAATAAGCA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCAACCTGTGTTGTCCTGGCATCAGGATACTGAGTTTAATAAGCA  1099

seq1  CCAGAAGGTCTCAGTATATAGGAGGCAGACTGTGGCAGCCACTGCATGAT  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGTCTCAGTATATAGGAGGCAGACTGTGGCAGCCACTGCATGAT  1149

seq1  GGTAGTCCAGGACATAGCCTGAATTC  1156
      ||||||||||||||||||||||||||
seq2  GGTAGTCCAGGACATAGCCTGAATTC  1175

seq1: chr14_43157327_43158496
seq2: B6Ng01-322F12.g_66_1237

seq1  GAATTCTGTGTCTGGAACTCCAGGAAGCAAGAATACCTGTCCTGAGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCTGGAACTCCAGGAAGCAAGAATACCTGTCCTGAGCTGG  50

seq1  TGAAATTTTAAAGCTGTTTTTAATAACAGGAATTACAGAGGGCTACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTAAAGCTGTTTTTAATAACAGGAATTACAGAGGGCTACAGAC  100

seq1  AGAACAGACTGTTTGCTCTTCTGACTATCATGAGCCTAAGGGGCTGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGACTGTTTGCTCTTCTGACTATCATGAGCCTAAGGGGCTGTCTG  150

seq1  AGGCAGCCCTGTTCTTACACTTCACCATACTTATGGCCCTTTGGCTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCCTGTTCTTACACTTCACCATACTTATGGCCCTTTGGCTTGGG  200

seq1  ACAGTCTCAAATCCAAACAACTCAATCTTTCAAATCATAACACCCTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTCAAATCCAAACAACTCAATCTTTCAAATCATAACACCCTGAAC  250

seq1  AATCTCCAAAGAAGGGAGACAAAAGAGATAAAGAAGCATAGACAAAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCAAAGAAGGGAGACAAAAGAGATAAAGAAGCATAGACAAAGTTG  300

seq1  GAAAGAAAATGGTAGCAGGCAAGGATGAAAATAAACTAGGATGCCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAATGGTAGCAGGCAAGGATGAAAATAAACTAGGATGCCAAGAA  350

seq1  GATGCAAGAAGACCCCTGGTCCTCCACTGTGCAGTCACTATTCATGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAGAAGACCCCTGGTCCTCCACTGTGCAGTCACTATTCATGATGT  400

seq1  ACAGAAAGGGAACTCAAAGGCTTAGCCCGCCTTTTTCACTCTCAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGGGAACTCAAAGGCTTAGCCCGCCTTTTTCACTCTCAGCCAAA  450

seq1  TGGGTTTAACACAGCAGGCTCATTGCTAATTCCAGGTTTCACCTTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAACACAGCAGGCTCATTGCTAATTCCAGGTTTCACCTTCCTTT  500

seq1  CTTTTATTACAAATGATTTCATACAGATAAGCACTTTTCCCTATACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTACAAATGATTTCATACAGATAAGCACTTTTCCCTATACAAAC  550

seq1  TCTTCAAAATCTGACTTTACACCATGTTTGTCTCCATTTGTTCTAGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAATCTGACTTTACACCATGTTTGTCTCCATTTGTTCTAGTGAG  600

seq1  CTAGGTGGAGAGGCATGATGACCAGCTGTTTCCCCAATGCAAAATGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGGAGAGGCATGATGACCAGCTGTTTCCCCAATGCAAAATGAACT  650

seq1  GACAGAGTACTTTTCTCTTTTAAGTTGTCCTCTATTATATCATTTAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTACTTTTCTCTTTTAAGTTGTCCTCTATTATATCATTTAAGGT  700

seq1  GTTTGCTCACAGAGTGACTATGTGAATATATACAATCAAATACGTACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTCACAGAGTGACTATGTGAATATATACAATCAAATACGTACATA  750

seq1  TGTGTACAGAGACACATGAATACGTGCCTTCACATATACATACACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAGAGACACATGAATACGTGCCTTCACATATACATACACACACA  800

seq1  TATAAAAGAAAAGAATACATGAATGAACAGTACTATATACTTGCACCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAAAAGAATACATGAATGAACAGTACTATATACTTGCACCTAC  850

seq1  AACAAGCAGCTACCATTACATAAATATTACACATAAACATGCTCACAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGCTACCATTACATAAATATTACACATAAACATGCTCACAAAC  900

seq1  ACCTGGGCAAAAACACATACACAAACAAAGATATATATATACACACACAC  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGC-AAAACACATACACAAACAAAGATATATATATACACACACAC  949

seq1  ACACAAACACACACACACACACACACACACACACACACACCCCAATGAAA  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACACAAACACACACACACACACACACACACACACACACTCCCCAATGAAA  999

seq1  ACACTGCTA-TATTACAGCACATTTCCTGACAACTGAGGAAGTATTAGGA  1049
      ||||||||| ||||||||||||||||||||| ||||  | ||||||||||
seq2  ACACTGCTATTATTACAGCACATTTCCTGAC-ACTGGAGGAGTATTAGGA  1048

seq1  CCTG-AGCTGTGTAATCGATTCTTAAATTAACCCAACTTG-TGCTGCCTG  1097
      |||| ||||||   |||||||  | || |||||  ||| | ||||| |||
seq2  CCTGAAGCTGTTGTATCGATTTCTTAAGTAACC--ACTGGTTGCTGGCTG  1096

seq1  GGCCTGTG-CTGATTTCCTTTCAGGAACTTTTTCCATGCAGATATTTGCT  1146
      || ||||| ||||||  | |||| |||| |||||||||||||||||||||
seq2  GGACTGTGCCTGATT--CGTTCA-GAAC-TTTTCCATGCAGATATTTGCT  1142

seq1  GCTT-CTACAAG--TATGA---TATAAAAC  1170
      |||| |||||||  |||||   ||||||||
seq2  GCTTCCTACAAGGTTATGATATTATAAAAC  1172