BAC Information

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BAC

Clone NameB6Ng01-323D21
Chromosome14 (Build37)
Map Location 13,270,765 - 13,271,850
singlet/doubletsinglet
Overlap geneCadps
Upstream geneLOC667059, LOC100041996, Ptprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2
Downstream geneEG432822, LOC100042022, LOC100042026, EG328354, Synpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323D21.bB6Ng01-323D21.g
ACCGA111875GA111876
length1,2021,085
definitionB6Ng01-323D21.b B6Ng01-323D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacaataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttattacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaatggtgttgttccttattttctttctcagcctgtt
tatttctttgtaatagaagaagccattgacttgtttgagtttattttata
tcagctacttccaccgaagcctgttatcaagtttaggagttctctgttgg
aattttttaagtacgttatatgatacattcatattcattctgcaatgcat
tgaactccctcttttcaatgtgtatatccccatgtagatactctctctat
tg
gaattctctcattctgcctgcctgagctcaggagctgtttgcatttatag
cttcctgagctgttgacatgtcctttccaaattctttgaagctccaattc
agtgctaaacttgtgtaagaccaagggcaaaggtaaaagaaaaagaaaag
caggaggcagcagatttctgtggatgggtggtcagaggagagagccattc
atcctgcttcactcccagttcctgccaagtaggtacagtaaaagtggtat
tggttctaggctgttttaacaacagtacaagaacagcaggcagcctagga
gcctgtgtctgtagtaatctcccagtgagaatcagatgccagacaaggcc
cagaacatcagcatcatgggtacaaatccttatctttggaatccctagga
gctgagttcaaatcctgatacaacactagccaactatgtgagcctgagta
ggtctctgagcccaagtttcctcctgtaagggtatgagagatggataata
tctcccacaatgccatagaatgagatgaaaccctcatggtctgagtttgt
agtcggactcaattaaataacatcttttacaagtaatgaatatgattgtg
ataagatacaatcatacatgcatacaacttctttccagacatgtcctaaa
aaggagtaaatttatgaacaaatataccctattttggcttttcctcagcc
tatagattctccttctatttaggcagatgttagctgataacatttcaagc
cattgctagatagcgttcgtcttcagcacacccagcttgttatgctgttt
aactctgaccttcccaaatataaagataaatttaatccagaagtatgatg
cccttcatgcctgctattcactgacaaagtgagttgattgggaaggggac
aatgcaaagaaacattgaatccaatttcactctgaaaacatatgtgtaat
gtgtcattctctgcaagaaacctatctagcccactcctttgacaaagaaa
gtatcccagagacgggagtcatttgtctgagtgataccgcattatgtaag
agtgagactaggagccaactccccttgccaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13270765_13271850
seq2: B6Ng01-323D21.g_64_1148 (reverse)

seq1  AAAC-TGGC-AGGGGAGTTGGCTTCTAGTCTCCACTC-TACATATTGCGG  47
      |||| |||| ||||||||||||| ||||||| ||||| |||||| |||||
seq2  AAACTTGGCAAGGGGAGTTGGCTCCTAGTCT-CACTCTTACATAATGCGG  49

seq1  TATCACCTCAGACAAATGACTCCCCGTCTCTGGGATACTTTCTTTGTCAA  97
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATCA-CTCAGACAAATGACT-CCCGTCTCTGGGATACTTTCTTTGTCAA  97

seq1  AGGAGTGGGCTAGATAGGTTTCTTTGCAGAGAATGACACATTACACATAT  147
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGAGTGGGCTAGATAGGTTTC-TTGCAGAGAATGACACATTACACATAT  146

seq1  GTTTTCAGAGTGAAATTGGATTCAATGTTTCTTTGCATTGTCCCCTTCCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGAGTGAAATTGGATTCAATGTTTCTTTGCATTGTCCCCTTCCC  196

seq1  AATCAACTCACTTTGTCAGTGAATAGCAGGCATGAAGGGCATCATACTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTCACTTTGTCAGTGAATAGCAGGCATGAAGGGCATCATACTTC  246

seq1  TGGATTAAATTTATCTTTATATTTGGGAAGGTCAGAGTTAAACAGCATAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAAATTTATCTTTATATTTGGGAAGGTCAGAGTTAAACAGCATAA  296

seq1  CAAGCTGGGTGTGCTGAAGACGAACGCTATCTAGCAATGGCTTGAAATGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGGTGTGCTGAAGACGAACGCTATCTAGCAATGGCTTGAAATGT  346

seq1  TATCAGCTAACATCTGCCTAAATAGAAGGAGAATCTATAGGCTGAGGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTAACATCTGCCTAAATAGAAGGAGAATCTATAGGCTGAGGAAA  396

seq1  AGCCAAAATAGGGTATATTTGTTCATAAATTTACTCCTTTTTAGGACATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATAGGGTATATTTGTTCATAAATTTACTCCTTTTTAGGACATG  446

seq1  TCTGGAAAGAAGTTGTATGCATGTATGATTGTATCTTATCACAATCATAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAGAAGTTGTATGCATGTATGATTGTATCTTATCACAATCATAT  496

seq1  TCATTACTTGTAAAAGATGTTATTTAATTGAGTCCGACTACAAACTCAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACTTGTAAAAGATGTTATTTAATTGAGTCCGACTACAAACTCAGA  546

seq1  CCATGAGGGTTTCATCTCATTCTATGGCATTGTGGGAGATATTATCCATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGGGTTTCATCTCATTCTATGGCATTGTGGGAGATATTATCCATC  596

seq1  TCTCATACCCTTACAGGAGGAAACTTGGGCTCAGAGACCTACTCAGGCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACCCTTACAGGAGGAAACTTGGGCTCAGAGACCTACTCAGGCTC  646

seq1  ACATAGTTGGCTAGTGTTGTATCAGGATTTGAACTCAGCTCCTAGGGATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTTGGCTAGTGTTGTATCAGGATTTGAACTCAGCTCCTAGGGATT  696

seq1  CCAAAGATAAGGATTTGTACCCATGATGCTGATGTTCTGGGCCTTGTCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATAAGGATTTGTACCCATGATGCTGATGTTCTGGGCCTTGTCTG  746

seq1  GCATCTGATTCTCACTGGGAGATTACTACAGACACAGGCTCCTAGGCTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGATTCTCACTGGGAGATTACTACAGACACAGGCTCCTAGGCTGC  796

seq1  CTGCTGTTCTTGTACTGTTGTTAAAACAGCCTAGAACCAATACCACTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTCTTGTACTGTTGTTAAAACAGCCTAGAACCAATACCACTTTT  846

seq1  ACTGTACCTACTTGGCAGGAACTGGGAGTGAAGCAGGATGAATGGCTCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACCTACTTGGCAGGAACTGGGAGTGAAGCAGGATGAATGGCTCTC  896

seq1  TCCTCTGACCACCCATCCACAGAAATCTGCTGCCTCCTGCTTTTCTTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGACCACCCATCCACAGAAATCTGCTGCCTCCTGCTTTTCTTTTT  946

seq1  CTTTTACCTTTGCCCTTGGTCTTACACAAGTTTAGCACTGAATTGGAGCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCTTTGCCCTTGGTCTTACACAAGTTTAGCACTGAATTGGAGCT  996

seq1  TCAAAGAATTTGGAAAGGACATGTCAACAGCTCAGGAAGCTATAAATGCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAATTTGGAAAGGACATGTCAACAGCTCAGGAAGCTATAAATGCA  1046

seq1  AACAGCTCCTGAGCTCAGGCAGGCAGAATGAGAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTCCTGAGCTCAGGCAGGCAGAATGAGAGAATTC  1085