BAC Information

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BAC

Clone NameB6Ng01-323E22
Chromosome14 (Build37)
Map Location 34,907,543 - 35,055,936
singlet/doubletdoublet
Overlap geneAnxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik
Upstream geneEG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl
Downstream geneLOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323E22.bB6Ng01-323E22.g
ACCGA111918GA111919
length1,084701
definitionB6Ng01-323E22.b B6Ng01-323E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,054,848 - 35,055,936)(34,907,543 - 34,908,243)
sequence
gaattctagattgcccctgaaaccaaagtccattttagaatggcctcttt
tgaaagaagtatccaaatatctaaaatgacagaattatatggacagtctt
ctgaaataattgcacttctcattaattttgtgtgttattgaacgtatctg
tggaaaagggcagtgttgtgtctgctatagcttatgaaatatgtgaccac
ttattaaatacccattcccactaagccatgtagaaatgtgtgcctgagta
gaagaaatgatgaaagcatcctagtcaagactaaggcaaatggaagacat
caaggagagtcgccactgttgaactcctaaagagatggtcagaaaataga
acccgggctaacaggatgcagccttgcctatcctttgtaagaggaccatg
acggctactcttggttgctgacttgtttggattaaaaaggaaattagtga
agtgcaactcttcatgagtctgcggggtatttccaaagacaataaactaa
gggggaggcctgttccgagtgtggtggcagctttgcatagattggggtcc
cagagggtagaaaagggaagggaaaactccagctagccccagccccctct
ctgcctcctggctgctgtgatgaaaactgccttgctgtgctgtcccttct
accatggctaccctgacacctctgaaaccaggagcccaaatatatcgctc
tgcttttattatgttatgccaaaatctttgttttagtgacaaaaagctgg
ttaacaaaagagcaaagaataaatctgaaaggcttaaagaaaccttaaat
gagtatggagaggagagtcatattcagatagattcgtaggctttgttagt
atgcagaaaggcaaaagtaaggtaggatcaaagatcatagtagatgttgt
agatactcaatatatgtttagtagatgaatacattgttagttaacatgct
tgaggttacagttaatgacaaaagaaaccacatccgccaccttgctctat
ttcctttttgaatgggaaccagaactcactcagctgcagcaagtcttcca
ttatattctttatgaagctgtagtaagtgagatc
gaattctctctcacctccacctcctcctgtcccaattctaggccctgcat
gaagcgggtgagaagattatgggaaccgatgagatgaagttcatcactat
cctgtgcacacgcagtgccactcacctgatgagaggtacagggcagaagt
gggacacgcaggggtgtgtggctgccctagccacgtggcctctgcctttg
tgtggaaggtctgatgtgtagtcttaagcagcttagacttggggagagag
ccatggagaccttgactcttccccatgtgccaagatggaggcagaaatgt
gctcatactgcactcaggtgcagcgcgtaatctacgtatcccttacgtgg
atgcttctctccatagtgttcgaggaatatgaaaaaattgccaacaagtg
cattgaggatagcatcaagagtgagacccatggttcgctggaggaggcca
tgctcactgtgggtaagaagggggcttggctctcagcacatttgtatcca
cagcccaggaaagtggcagcagatgactggatctctgtaattcaaagagc
gtccccaactcccagtgctctaaacccatacctttcagcccacatccctg
ggacaacacctcaaaagtctcagtgtggcctgccaggaactattcttcat
gttgtctattcaatcccccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35054848_35055936
seq2: B6Ng01-323E22.b_44_1127 (reverse)

seq1  GATCTCAACTTACTTACAGCTTCCATAAAGAATATAATGGAGGACTTGCC  50
      |||||| |||||| |||||||| |||||||||||||||||| |||||| |
seq2  GATCTC-ACTTAC-TACAGCTT-CATAAAGAATATAATGGAAGACTTG-C  46

seq1  TGCAGCTGAGTGAGTTCTGGGTTCCCATTCAAAAAGGAATTAAGAGCAAG  100
      |||||||||||||||||| |||||||||||||||||||| | ||||||||
seq2  TGCAGCTGAGTGAGTTCT-GGTTCCCATTCAAAAAGGAAAT-AGAGCAAG  94

seq1  GTGGCGGATGTGGTTTCTTTTGTCATTAACTGTAACCTCAAGCATGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGGATGTGGTTTCTTTTGTCATTAACTGTAACCTCAAGCATGTTAA  144

seq1  CTAACAATGTATTCATCTACTAAACATATATTGAGTATCTACAACATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATGTATTCATCTACTAAACATATATTGAGTATCTACAACATCTA  194

seq1  CTATGATCTTTGATCCTACCTTACTTTTGCCTTTCTGCATACTAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATCTTTGATCCTACCTTACTTTTGCCTTTCTGCATACTAACAAAG  244

seq1  CCTACGAATCTATCTGAATATGACTCTCCTCTCCATACTCATTTAAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACGAATCTATCTGAATATGACTCTCCTCTCCATACTCATTTAAGGTT  294

seq1  TCTTTAAGCC-TTCAGATTTATTCTTTGCTCTTTTGTTAACCAGCTTTTT  349
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGCCTTTCAGATTTATTCTTTGCTCTTTTGTTAACCAGCTTTTT  344

seq1  GTCACTAAAACAAAGATTTTGGCATAACATAATAAAAGCAGAGCGATATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAAACAAAGATTTTGGCATAACATAATAAAAGCAGAGCGATATA  394

seq1  TTTGGGCTCCTGGTTTCAGAGGTGTCAGGGTAGCCATGGTAGAAGGGACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTCCTGGTTTCAGAGGTGTCAGGGTAGCCATGGTAGAAGGGACA  444

seq1  GCACAGCAAGGCAGTTTTCATCACAGCAGCCAGGAGGCAGAGAGGGGGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAAGGCAGTTTTCATCACAGCAGCCAGGAGGCAGAGAGGGGGCT  494

seq1  GGGGCTAGCTGGAGTTTTCCCTTCCCTTTTCTACCCTCTGGGACCCCAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTAGCTGGAGTTTTCCCTTCCCTTTTCTACCCTCTGGGACCCCAAT  544

seq1  CTATGCAAAGCTGCCACCACACTCGGAACAGGCCTCCCCCTTAGTTTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAAAGCTGCCACCACACTCGGAACAGGCCTCCCCCTTAGTTTATT  594

seq1  GTCTTTGGAAATACCCCGCAGACTCATGAAGAGTTGCACTTCACTAATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGGAAATACCCCGCAGACTCATGAAGAGTTGCACTTCACTAATTT  644

seq1  CCTTTTTAATCCAAACAAGTCAGCAACCAAGAGTAGCCGTCATGGTCCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTAATCCAAACAAGTCAGCAACCAAGAGTAGCCGTCATGGTCCTC  694

seq1  TTACAAAGGATAGGCAAGGCTGCATCCTGTTAGCCCGGGTTCTATTTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGGATAGGCAAGGCTGCATCCTGTTAGCCCGGGTTCTATTTTCT  744

seq1  GACCATCTCTTTAGGAGTTCAACAGTGGCGACTCTCCTTGATGTCTTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCTCTTTAGGAGTTCAACAGTGGCGACTCTCCTTGATGTCTTCCA  794

seq1  TTTGCCTTAGTCTTGACTAGGATGCTTTCATCATTTCTTCTACTCAGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTAGTCTTGACTAGGATGCTTTCATCATTTCTTCTACTCAGGCA  844

seq1  CACATTTCTACATGGCTTAGTGGGAATGGGTATTTAATAAGTGGTCACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCTACATGGCTTAGTGGGAATGGGTATTTAATAAGTGGTCACAT  894

seq1  ATTTCATAAGCTATAGCAGACACAACACTGCCCTTTTCCACAGATACGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAAGCTATAGCAGACACAACACTGCCCTTTTCCACAGATACGTT  944

seq1  CAATAACACACAAAATTAATGAGAAGTGCAATTATTTCAGAAGACTGTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACACACAAAATTAATGAGAAGTGCAATTATTTCAGAAGACTGTCC  994

seq1  ATATAATTCTGTCATTTTAGATATTTGGATACTTCTTTCAAAAGAGGCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTCTGTCATTTTAGATATTTGGATACTTCTTTCAAAAGAGGCCA  1044

seq1  TTCTAAAATGGACTTTGGTTTCAGGGGCAATCTAGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATGGACTTTGGTTTCAGGGGCAATCTAGAATTC  1084

seq1: chr14_34907543_34908243
seq2: B6Ng01-323E22.g_64_764

seq1  GAATTCTCTCTCACCTCCACCTCCTCCTGTCCCAATTCTAGGCCCTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCACCTCCACCTCCTCCTGTCCCAATTCTAGGCCCTGCAT  50

seq1  GAAGCGGGTGAGAAGATTATGGGAACCGATGAGATGAAGTTCATCACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGGGTGAGAAGATTATGGGAACCGATGAGATGAAGTTCATCACTAT  100

seq1  CCTGTGCACACGCAGTGCCACTCACCTGATGAGAGGTACAGGGCAGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCACACGCAGTGCCACTCACCTGATGAGAGGTACAGGGCAGAAGT  150

seq1  GGGACACGCAGGGGTGTGTGGCTGCCCTAGCCACGTGGCCTCTGCCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACGCAGGGGTGTGTGGCTGCCCTAGCCACGTGGCCTCTGCCTTTG  200

seq1  TGTGGAAGGTCTGATGTGTAGTCTTAAGCAGCTTAGACTTGGGGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGTCTGATGTGTAGTCTTAAGCAGCTTAGACTTGGGGAGAGAG  250

seq1  CCATGGAGACCTTGACTCTTCCCCATGTGCCAAGATGGAGGCAGAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGACCTTGACTCTTCCCCATGTGCCAAGATGGAGGCAGAAATGT  300

seq1  GCTCATACTGCACTCAGGTGCAGCGCGTAATCTACGTATCCCTTACGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATACTGCACTCAGGTGCAGCGCGTAATCTACGTATCCCTTACGTGG  350

seq1  ATGCTTCTCTCCATAGTGTTCGAGGAATATGAAAAAATTGCCAACAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCTCTCCATAGTGTTCGAGGAATATGAAAAAATTGCCAACAAGTG  400

seq1  CATTGAGGATAGCATCAAGAGTGAGACCCATGGTTCGCTGGAGGAGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGGATAGCATCAAGAGTGAGACCCATGGTTCGCTGGAGGAGGCCA  450

seq1  TGCTCACTGTGGGTAAGAAGGGGGCTTGGCTCTCAGCACATTTGTATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACTGTGGGTAAGAAGGGGGCTTGGCTCTCAGCACATTTGTATCCA  500

seq1  CAGCCCAGGAAAGTGGCAGCAGATGACTGGATCTCTGTAATTCAAAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGGAAAGTGGCAGCAGATGACTGGATCTCTGTAATTCAAAGAGC  550

seq1  GTCCCCAACTCCCAGTGCTCTAAACCCATACCTTTCAGCCCACATCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAACTCCCAGTGCTCTAAACCCATACCTTTCAGCCCACATCCCTG  600

seq1  GGACAACACCTCAAAAGTCTCAGTGTGGCCTGCCAGGAACTATTCTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACACCTCAAAAGTCTCAGTGTGGCCTGCCAGGAACTATTCTTCAT  650

seq1  GTTGTCTATTCAATCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTATTCAATCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  700

seq1  T  701
      |
seq2  T  701