BAC Information

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BAC

Clone NameB6Ng01-323K20
Chromosome14 (Build37)
Map Location 12,171,251 - 12,304,341
singlet/doubletdoublet
Overlap genenone
Upstream geneFhit, LOC100041974, LOC667030, EG382843, LOC100042427
Downstream geneLOC667059, LOC100041996, Ptprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2, Cadps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323K20.bB6Ng01-323K20.g
ACCGA112195GA112196
length6311,112
definitionB6Ng01-323K20.b B6Ng01-323K20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,303,712 - 12,304,341)(12,171,251 - 12,172,360)
sequence
gaattcagtcctagtcaaagataatgattgagaactttgagatcctgcca
aaacaagatgggctaggtgttcagagatgaagattgacaggtgttctcac
aaaaatgcttatttttatttatttagtatttagatttatttatattattt
tatgtgtatgaatgttttgcctgtatgtattacatgtacagtgtgtgatc
ctggtaccctaaatgttcagaaaaggacatcaggtccccttgagttggga
ttagggatggttgtagttatatgtgtgctgggaactgagtcctctgcaga
gcaagagcccttagccattgagcaaagcttctaggctcattttatgtatt
aatttttatttttgaaacaaggcttcactatgtagccatggctggcctgg
aactgtctgtgtagcctagactggcctctaatgcagtgagatatgtctgt
ctttgggtcccatttgttgggatccttttcattttaatttaatggaatca
ctacttttcccctttctccctttttattttggtgcaggggactttatttt
tggagcacaaggaagtgtctttgtgcctgctaggaaagttgctcttctat
tcagccttgacctcctctcatccttgagttt
gaattctttgtggagttttcacaaacacatcaatgcaatcttataataat
aggaggcagttagatttgaaatgactcacactgctttcatctggggactg
atttcttacccaagtagtattcagagacaaatatatagagcccacatttt
catttcatttctagtttcatgcttttggttgtatttataaaaagctgcat
gttgttcaaaaatgaaaactattcaaatatgtattattacattatttcta
caatcttcagtgtacaaatggtctgctgtctgatatctgagaaattacaa
gctaagataaaaaactaatgttgcctcagaagaaagactaataagataca
ttggaactgggaagtctagaattgtgaaagccttcatttcagagaggaaa
aaagggagtagataccaacaaattattccacaagtgtggaaacaagtgtt
gtcatatctcaccaagctgtggactaaagatgtgtcttccagccatgtcc
ctttactagtgctgtttagatttgttcaaacattaaatgccctcagagag
tgtgctatgtgcttatcttaaactcaccctggaagataaatgcaaaactt
aaattcatactaaaatataagtaaagggaagttgtgagagaaccaaactc
actccatttcagaacaggcagccatgttaggccttaagcttcaattttcc
aaaaggacagcccaggcttctcagaaaacccacagaaaaataggcaatca
gcaactgccccaacatccagccaggggcttaaaacacgtaagggaaaaag
tccctataaggtaaccctctctcccttgaagtatgaaccaataagaagtg
tacaaatatcccataccataaactcaaccaaccctgatggaagtgatcaa
gatgcaactgggaaaacccctaactggatttaaagtgggtctgtgagctt
cccatgtggtagtcgccattttagatggttgtcccctgcgtgctggctgt
tttctgcagaataagcactctttgccttttgcatactgggatcttctttc
atgactctcaagatccttacagtttgatgttctggagagggttaaatagg
aatgtatgcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12303712_12304341
seq2: B6Ng01-323K20.b_48_678 (reverse)

seq1  AAACTCAAGGCTGAGAGGAGGCCAAGGCTCAATAGAAGAGCAGCTTGCCT  50
      |||||||||| |||||||||| ||||||| |||||||||||| ||| |||
seq2  AAACTCAAGGATGAGAGGAGGTCAAGGCTGAATAGAAGAGCAACTTTCCT  50

seq1  AGCAGGCACAAAGACACTTCCTTGTGCTCC-CAAATAAAGTCCCCTGCAC  99
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  AGCAGGCACAAAGACACTTCCTTGTGCTCCAAAAATAAAGTCCCCTGCAC  100

seq1  CAAAATAAAAAGGGAGAAAGGGGAAATGTAGTGATTCCATTAAATTAAAA  149
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAAATAAAAAGGGAGAAAGGGGAAAAGTAGTGATTCCATTAAATTAAAA  150

seq1  TGAAAAGGATCCCAACAAATGGGACCCAAAGACAGACAGATCTCACTGCA  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAAAAGGATCCCAACAAATGGGACCCAAAGACAGACATATCTCACTGCA  200

seq1  TTAGAGGCCAGTCTAGGCTACACAGACAGTTCCAGGCCAGCCATGGCTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGCCAGTCTAGGCTACACAGACAGTTCCAGGCCAGCCATGGCTAC  250

seq1  ATAGTGAAGCCTTGTTTCAAAAATAAAAATTAATACATAAAATGAGCCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAAGCCTTGTTTCAAAAATAAAAATTAATACATAAAATGAGCCTA  300

seq1  GAAGCTTTGCTCAATGGCTAAGGGCTCTTGCTCTGCAGAGGACTCAGTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTTGCTCAATGGCTAAGGGCTCTTGCTCTGCAGAGGACTCAGTTC  350

seq1  CCAGCACACATATAACTACAACCATCCCTAATCCCAACTCAAGGGGACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACACATATAACTACAACCATCCCTAATCCCAACTCAAGGGGACCT  400

seq1  GATGTCCTTTTCTGAACATTTAGGGTACCAGGATCACACACTGTACATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCTTTTCTGAACATTTAGGGTACCAGGATCACACACTGTACATGT  450

seq1  AATACATACAGGCAAAACATTCATACACATAAAATAATATAAATAAATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATACAGGCAAAACATTCATACACATAAAATAATATAAATAAATCT  500

seq1  AAATACTAAATAAATAAAAATAAGCATTTTTGTGAGAACACCTGTCAATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAAATAAATAAAAATAAGCATTTTTGTGAGAACACCTGTCAATC  550

seq1  TTCATCTCTGAACACCTAGCCCATCTTGTTTTGGCAGGATCTCAAAGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTGAACACCTAGCCCATCTTGTTTTGGCAGGATCTCAAAGTTC  600

seq1  TCAATCATTATCTTTGACTAGGACTGAATTC  630
      |||||||||||||||||||||||||||||||
seq2  TCAATCATTATCTTTGACTAGGACTGAATTC  631

seq1: chr14_12171251_12172360
seq2: B6Ng01-323K20.g_63_1174

seq1  GAATTCTTTGTGGAGTTTTCACAAACACATCAATGCAATCTTATAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGGAGTTTTCACAAACACATCAATGCAATCTTATAATAAT  50

seq1  AGGAGGCAGTTAGATTTGAAATGACTCACACTGCTTTCATCTGGGGACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCAGTTAGATTTGAAATGACTCACACTGCTTTCATCTGGGGACTG  100

seq1  ATTTCTTACCCAAGTAGTATTCAGAGACAAATATATAGAGCCCACATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTACCCAAGTAGTATTCAGAGACAAATATATAGAGCCCACATTTT  150

seq1  CATTTCATTTCTAGTTTCATGCTTTTGGTTGTATTTATAAAAAGCTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATTTCTAGTTTCATGCTTTTGGTTGTATTTATAAAAAGCTGCAT  200

seq1  GTTGTTCAAAAATGAAAACTATTCAAATATGTATTATTACATTATTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCAAAAATGAAAACTATTCAAATATGTATTATTACATTATTTCTA  250

seq1  CAATCTTCAGTGTACAAATGGTCTGCTGTCTGATATCTGAGAAATTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTCAGTGTACAAATGGTCTGCTGTCTGATATCTGAGAAATTACAA  300

seq1  GCTAAGATAAAAAACTAATGTTGCCTCAGAAGAAAGACTAATAAGATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGATAAAAAACTAATGTTGCCTCAGAAGAAAGACTAATAAGATACA  350

seq1  TTGGAACTGGGAAGTCTAGAATTGTGAAAGCCTTCATTTCAGAGAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTGGGAAGTCTAGAATTGTGAAAGCCTTCATTTCAGAGAGGAAA  400

seq1  AAAGGGAGTAGATACCAACAAATTATTCCACAAGTGTGGAAACAAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGTAGATACCAACAAATTATTCCACAAGTGTGGAAACAAGTGTT  450

seq1  GTCATATCTCACCAAGCTGTGGACTAAAGATGTGTCTTCCAGCCATGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCTCACCAAGCTGTGGACTAAAGATGTGTCTTCCAGCCATGTCC  500

seq1  CTTTACTAGTGCTGTTTAGATTTGTTCAAACATTAAATGCCCTCAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAGTGCTGTTTAGATTTGTTCAAACATTAAATGCCCTCAGAGAG  550

seq1  TGTGCTATGTGCTTATCTTAAACTCACCCTGGAAGATAAATGCAAAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATGTGCTTATCTTAAACTCACCCTGGAAGATAAATGCAAAACTT  600

seq1  AAATTCATACTAAAATATAAGTAAAGGGAAGTTGTGAGAGAACCAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATACTAAAATATAAGTAAAGGGAAGTTGTGAGAGAACCAAACTC  650

seq1  ACTCCATTTCAGAACAGGCAGCCATGTTAGGCCTTAAGCTTCAATTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTTCAGAACAGGCAGCCATGTTAGGCCTTAAGCTTCAATTTTCC  700

seq1  AAAAGGACAGCCCAGGCTTCTCAGAAAACCCACAGAAAAATAGGCAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAGCCCAGGCTTCTCAGAAAACCCACAGAAAAATAGGCAATCA  750

seq1  GCAACTGCCCCAACATCCAGCCAGGGGCTTAAAACACGTAA-GGAAAAAG  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCAACTGCCCCAACATCCAGCCAGGGGCTTAAAACACGTAAGGGAAAAAG  800

seq1  TCCCTATAAGGTAACCCTCTCTCCCTTGAAGTATGAACCAATAAGAAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATAAGGTAACCCTCTCTCCCTTGAAGTATGAACCAATAAGAAGTG  850

seq1  TACAAATATCCCATACCATAAACTCAACCAACCCTGATGGAAGTGATCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATATCCCATACCATAAACTCAACCAACCCTGATGGAAGTGATCAA  900

seq1  GATGCAACT-GGAAAACCCCTAACTGGATTTAAAGTGGGTCTGTGAGCTT  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACTGGGAAAACCCCTAACTGGATTTAAAGTGGGTCTGTGAGCTT  950

seq1  CCCATGTGGTAGTCGCCATTTTAGATGGTTGTCCCCTGCGTGCTGGCTG-  997
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCATGTGGTAGTCGCCATTTTAGATGGTTGTCCCCTGCGTGCTGGCTGT  1000

seq1  TTTCTGCAGAATAAGCACTCTTTG-CTTTTGCATACTGGGATCTTCTTTC  1046
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTCTGCAGAATAAGCACTCTTTGCCTTTTGCATACTGGGATCTTCTTTC  1050

seq1  AATGACTCTC-AGATCCTTACAGTTGTATGTTCTTGAAGAGGG-TAAATA  1094
       ||||||||| ||||||||||||||  |||||| || |||||| ||||||
seq2  -ATGACTCTCAAGATCCTTACAGTTTGATGTTC-TGGAGAGGGTTAAATA  1098

seq1  GGAATTGTATGGCTTC  1110
      |||| ||||| |||||
seq2  GGAA-TGTAT-GCTTC  1112