BAC Information

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BAC

Clone NameB6Ng01-325G11
Chromosome14 (Build37)
Map Location 122,944,599 - 122,945,471
singlet/doubletsinglet
Overlap genePcca
Upstream geneDock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847
Downstream geneBC006662, 4930594M22Rik, Tmtc4, Vgcnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325G11.bB6Ng01-325G11.g
ACCGA113471GA113472
length1,2691,002
definitionB6Ng01-325G11.b B6Ng01-325G11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaaatagctggatataaaataaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcagcg
tgactctaactaaggaagtgaaaaatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatcttccatg
ctcatggatgggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aatgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaagataaaagaacctctggtggaatca
ccatgcctgacctaaagcattactacagagcaattgtgataaaaattgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcgtgtagaagatgcgaatcgatccatacttatct
ccttgtactaaggtcaaatctagtggatcaggacttcacataaaaccaga
gacactgaaacttatagaggagaaagtggggaaagcttgagatatggcac
aggaaaaatcctgaacagaacagcatgctgtgctgttagatcgagatgac
aaatggacctatgaacctccaggttctgcaggcaaagaaccgttcataga
caaagaactccacgattggagacttttacattcctatcgaatggacataa
atctctccacatattatag
gaattcttgagtacagtggcatttcacagttcttcataaccctctggctc
gacaattctttccatctcttcttctaatgatttcacctgaacattgaagg
gacatattcacttagagctgaacacccagtaatcactttataagcacttt
gaccaattttgaatctttacagttaaggctgcctactgcaagagagatag
ctcagccaatataggtaccaaacctgctactaaacctgatgacctgagtt
ctactttctggtacccatatggtcagagaagactgacttctgtaagttgt
gctctgaccttcacatgcacagcacatgcatacacatgcatacatgcttg
cacatgaaaggaaactatttttttttaaaggaactcctctgaacaaagct
gagagcagtactagtttatggaactaaatataattatcttgaatgtaatt
tgaagataccatatccatttagaaaacaagagcatagcttcccctactag
ggcctatgttctttatgctttgggcatttgaccaggttttcagtaccaga
cataaagtctttactgtggagtgaacctcagtctccaccagaaagtgatt
ggttatcctgtatagacttcccactattgtagcaggggcacatcctacct
cttcggtctgttgggtatccggtgcaatatccatagctgattaagtcttg
acttttcttctccagcagtctgccttgtacctttttaaactatgagggca
agccaatagggtggacgcttctagctcagttctaatttggtttctttgtg
tcctatagccagagcctgtgatgtcatcatcaacaggatgttactgttta
gttctgaaggcaagtcaacagaagtggcaataatctgtattatttggggg
gtgggtggtggtctcaggatgtttcctgaggaataacttgtaaacaggta
gcctgtctcttggcacttggtgttttgcatttgatagcctatggctcttg
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122944599_122945471
seq2: B6Ng01-325G11.g_68_940

seq1  GAATTCTTGAGTACAGTGGCATTTCACAGTTCTTCATAACCCTCTGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGTACAGTGGCATTTCACAGTTCTTCATAACCCTCTGGCTC  50

seq1  GACAATTCTTTCCATCTCTTCTTCTAATGATTTCACCTGAACATTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTCTTTCCATCTCTTCTTCTAATGATTTCACCTGAACATTGAAGG  100

seq1  GACATATTCACTTAGAGCTGAACACCCAGTAATCACTTTATAAGCACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTCACTTAGAGCTGAACACCCAGTAATCACTTTATAAGCACTTT  150

seq1  GACCAATTTTGAATCTTTACAGTTAAGGCTGCCTACTGCAAGAGAGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATTTTGAATCTTTACAGTTAAGGCTGCCTACTGCAAGAGAGATAG  200

seq1  CTCAGCCAATATAGGTACCAAACCTGCTACTAAACCTGATGACCTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCAATATAGGTACCAAACCTGCTACTAAACCTGATGACCTGAGTT  250

seq1  CTACTTTCTGGTACCCATATGGTCAGAGAAGACTGACTTCTGTAAGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTGGTACCCATATGGTCAGAGAAGACTGACTTCTGTAAGTTGT  300

seq1  GCTCTGACCTTCACATGCACAGCACATGCATACACATGCATACATGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGACCTTCACATGCACAGCACATGCATACACATGCATACATGCTTG  350

seq1  CACATGAAAGGAAACTATTTTTTTTTAAAGGAACTCCTCTGAACAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAAAGGAAACTATTTTTTTTTAAAGGAACTCCTCTGAACAAAGCT  400

seq1  GAGAGCAGTACTAGTTTATGGAACTAAATATAATTATCTTGAATGTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGTACTAGTTTATGGAACTAAATATAATTATCTTGAATGTAATT  450

seq1  TGAAGATACCATATCCATTTAGAAAACAAGAGCATAGCTTCCCCTACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATACCATATCCATTTAGAAAACAAGAGCATAGCTTCCCCTACTAG  500

seq1  GGCCTATGTTCTTTATGCTTTGGGCATTTGACCAGGTTTTCAGTACCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATGTTCTTTATGCTTTGGGCATTTGACCAGGTTTTCAGTACCAGA  550

seq1  CATAAAGTCTTTACTGTGGAGTGAACCTCAGTCTCCACCAGAAAGTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTCTTTACTGTGGAGTGAACCTCAGTCTCCACCAGAAAGTGATT  600

seq1  GGTTATCCTGTATAGACTTCCCACTATTGTAGCAGGGGCACATCCTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCCTGTATAGACTTCCCACTATTGTAGCAGGGGCACATCCTACCT  650

seq1  CTTCGGTCTGTTGGGTATCCGGTGCAATATCCATAGCTGATTAAGTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGTCTGTTGGGTATCCGGTGCAATATCCATAGCTGATTAAGTCTTG  700

seq1  ACTTTTCTTCTCCAGCAGTCTGCCTTGTACCTTTTTAAACTATGAGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTTCTCCAGCAGTCTGCCTTGTACCTTTTTAAACTATGAGGGCA  750

seq1  AGCCAATAGGGTGGACGCTTCTAGCTCAGTTCTAATTTGGTTTCTTTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATAGGGTGGACGCTTCTAGCTCAGTTCTAATTTGGTTTCTTTGTG  800

seq1  TCCTATAGCCAGAGCCTGTGATGTCATCATCAACAGGATGTTACTGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAGCCAGAGCCTGTGATGTCATCATCAACAGGATGTTACTGTTTA  850

seq1  GTTCTGAAGGCAAGTCAACAGAA  873
      |||||||||||||||||||||||
seq2  GTTCTGAAGGCAAGTCAACAGAA  873