BAC Information

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BAC

Clone NameB6Ng01-326I01
Chromosome14 (Build37)
Map Location 121,458,385 - 121,664,779
singlet/doubletdoublet
Overlap geneFarp1, LOC100043837
Upstream geneLOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
Downstream geneStk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I01.bB6Ng01-326I01.g
ACCGA114297GA114298
length7391,063
definitionB6Ng01-326I01.b B6Ng01-326I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,664,039 - 121,664,779)(121,458,385 - 121,459,434)
sequence
gaattcacaggaagttcctgcctgaaggatgctgtctgagggttggaggc
gttcctgctgtaccttcaccaaggcgcctcattagagctgcaaggttctc
ccctccccctgtccccccttcgtacaagaatgaggaagatgttccaacaa
aggaagacccttctgctaaagccagaagatcaggttcctcacagaatggc
agatgctcacccaaacagagggaaggcacaactcaccctggagatttcct
ggaacctaatggatggcccagaatttacagatacatggaatggcccaggt
gtgtgtgaaaggtctacttagctcaaagaatgttaggttagctatttcca
tgacagtggcttgggtggaacgggcagggaggaggattcaggcttctatt
aaaggaaatacttcctcacgcatggctaaataatagcctaagacaaacta
aacatgagcagggggaggggcaagagtgcgaggcaaactcagttacttca
ctccctctaccctgaggtgtgatctcaaacgtgtggtgatcctcctgcct
cagcataccgggtagtaggactacacgcacaagcctatgtgtcagcacat
gcctgcccaactatttgcttaaaatatctactggtattaaaaccttcaac
aggggacttccttcttgtgtctgcttgctgtcagagctctctctctctct
ctctctctctctctctctctctctctctcacactcacac
gaattcctttggagctctgtgacttgtcgtttaaagtttacgtcacatgg
aactaggatcttgcttttctctcagtaacagtggcttaacaatggtgtgc
atccctccacagtaaaaggctgccaggcggattgtcctgctgccgatgca
gaatctgccttggctgccgaccgctgctgtactgaccatgcggcctgtgt
atgcaccgtgactaattctccatgttgcccagttggtttgctcagcgtcg
atctctgccttgcttgtccttcctcagtctgggagcactgggctaactca
ttgcaaagctctggctctatgcctgagtccctgctctgtactctagggat
cctccagtgctcagccttgccctggctctgaggtcatctgaacttttcca
gatgcagctgagtggctttgtagtcctggccaggggcagggataggaatc
tccctgacttacagtgggaattcctttgctcgtagcctctgccgtctatc
tcttccagcctcggctttctgcatttccctatgatatgatatagtctttg
gttgagccggtattgagtgcatgtctttgggactgtatggacactgctct
taaacacttaaaatttttactagcagtaattaattgaaaacatttggggg
agtggtgctggcaagatgattcagtgggtaaaggcatttgttgtctagcc
tgggttcactctccatcatccactagaaccaacttctgtaaactaccctt
tggcctccacgtgggatgcatgtgtgtgcatgggcaggcacacgcgtgca
cacacattaaatatgatagaatttttttgatgctgtggtaagagaagtat
tccccccaaatcccactacccattaaaggcgtagtcagtactcaggtgac
actgcagatagcgggagcccttcagaaggccgagcctattcatgggagct
ttttacagcgggtctcttgaagggggcttgtgagaaccccggctcagttc
ttctctgtttttctggataataaagtggggaatggctaatcctggggaat
ggaatcttctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121664039_121664779
seq2: B6Ng01-326I01.b_47_785 (reverse)

seq1  GTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
        ||| ||| | ||||||||||||||||||||||||||||||||||||||
seq2  --GTGTGAGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  48

seq1  GAGAGCTCTGACAGCAAGCAGACACAAGAAGGAAGTCCCCTGTTGAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTCTGACAGCAAGCAGACACAAGAAGGAAGTCCCCTGTTGAAGGT  98

seq1  TTTAATACCAGTAGATATTTTAAGCAAATAGTTGGGCAGGCATGTGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACCAGTAGATATTTTAAGCAAATAGTTGGGCAGGCATGTGCTGA  148

seq1  CACATAGGCTTGTGCGTGTAGTCCTACTACCCGGTATGCTGAGGCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGCTTGTGCGTGTAGTCCTACTACCCGGTATGCTGAGGCAGGAG  198

seq1  GATCACCACACGTTTGAGATCACACCTCAGGGTAGAGGGAGTGAAGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACCACACGTTTGAGATCACACCTCAGGGTAGAGGGAGTGAAGTAAC  248

seq1  TGAGTTTGCCTCGCACTCTTGCCCCTCCCCCTGCTCATGTTTAGTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGCCTCGCACTCTTGCCCCTCCCCCTGCTCATGTTTAGTTTGTC  298

seq1  TTAGGCTATTATTTAGCCATGCGTGAGGAAGTATTTCCTTTAATAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTATTATTTAGCCATGCGTGAGGAAGTATTTCCTTTAATAGAAGC  348

seq1  CTGAATCCTCCTCCCTGCCCGTTCCACCCAAGCCACTGTCATGGAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCCTCCTCCCTGCCCGTTCCACCCAAGCCACTGTCATGGAAATAG  398

seq1  CTAACCTAACATTCTTTGAGCTAAGTAGACCTTTCACACACACCTGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTAACATTCTTTGAGCTAAGTAGACCTTTCACACACACCTGGGCC  448

seq1  ATTCCATGTATCTGTAAATTCTGGGCCATCCATTAGGTTCCAGGAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATGTATCTGTAAATTCTGGGCCATCCATTAGGTTCCAGGAAATCT  498

seq1  CCAGGGTGAGTTGTGCCTTCCCTCTGTTTGGGTGAGCATCTGCCATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGAGTTGTGCCTTCCCTCTGTTTGGGTGAGCATCTGCCATTCTG  548

seq1  TGAGGAACCTGATCTTCTGGCTTTAGCAGAAGGGTCTTCCTTTGTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACCTGATCTTCTGGCTTTAGCAGAAGGGTCTTCCTTTGTTGGAA  598

seq1  CATCTTCCTCATTCTTGTACGAAGGGGGGACAGGGGGAGGGGAGAACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCTCATTCTTGTACGAAGGGGGGACAGGGGGAGGGGAGAACCTT  648

seq1  GCAGCTCTAATGAGGCGCCTTGGTGAAGGTACAGCAGGAACGCCTCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTAATGAGGCGCCTTGGTGAAGGTACAGCAGGAACGCCTCCAAC  698

seq1  CCTCAGACAGCATCCTTCAGGCAGGAACTTCCTGTGAATTC  741
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACAGCATCCTTCAGGCAGGAACTTCCTGTGAATTC  739

seq1: chr14_121458385_121459434
seq2: B6Ng01-326I01.g_65_1127

seq1  GAATTCCTTTGGAGCTCTGTGACTTGTCGTTTAAAGTTTACGTCACATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGAGCTCTGTGACTTGTCGTTTAAAGTTTACGTCACATGG  50

seq1  AACTAGGATCTTGCTTTTCTCTCAGTAACAGTGGCTTAACAATGGTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGATCTTGCTTTTCTCTCAGTAACAGTGGCTTAACAATGGTGTGC  100

seq1  ATCCCTCCACAGTAAAAGGCTGCCAGGCGGATTGTCCTGCTGCCGATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCACAGTAAAAGGCTGCCAGGCGGATTGTCCTGCTGCCGATGCA  150

seq1  GAATCTGCCTTGGCTGCCGACCGCTGCTGTACTGACCATGCGGCCTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCCTTGGCTGCCGACCGCTGCTGTACTGACCATGCGGCCTGTGT  200

seq1  ATGCACCGTGACTAATTCTCCATGTTGCCCAGTTGGTTTGCTCAGCGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCGTGACTAATTCTCCATGTTGCCCAGTTGGTTTGCTCAGCGTCG  250

seq1  ATCTCTGCCTTGCTTGTCCTTCCTCAGTCTGGGAGCACTGGGCTAACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCCTTGCTTGTCCTTCCTCAGTCTGGGAGCACTGGGCTAACTCA  300

seq1  TTGCAAAGCTCTGGCTCTATGCCTGAGTCCCTGCTCTGTACTCTAGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAGCTCTGGCTCTATGCCTGAGTCCCTGCTCTGTACTCTAGGGAT  350

seq1  CCTCCAGTGCTCAGCCTTGCCCTGGCTCTGAGGTCATCTGAACTTTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTGCTCAGCCTTGCCCTGGCTCTGAGGTCATCTGAACTTTTCCA  400

seq1  GATGCAGCTGAGTGGCTTTGTAGTCCTGGCCAGGGGCAGGGATAGGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGCTGAGTGGCTTTGTAGTCCTGGCCAGGGGCAGGGATAGGAATC  450

seq1  TCCCTGACTTACAGTGGGAATTCCTTTGCTCGTAGCCTCTGCCGTCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGACTTACAGTGGGAATTCCTTTGCTCGTAGCCTCTGCCGTCTATC  500

seq1  TCTTCCAGCCTCGGCTTTCTGCATTTCCCTATGATATGATATAGTCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCCTCGGCTTTCTGCATTTCCCTATGATATGATATAGTCTTTG  550

seq1  GTTGAGCCGGTATTGAGTGCATGTCTTTGGGACTGTATGGACACTGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCGGTATTGAGTGCATGTCTTTGGGACTGTATGGACACTGCTCT  600

seq1  TAAACACTTAAAATTTTTACTAGCAGTAATTAATTGAAAACATTTGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTTAAAATTTTTACTAGCAGTAATTAATTGAAAACATTTGGGGG  650

seq1  AGTGGTGCTGGCAAGATGATTCAGTGGGTAAAGGCATTTGTTGTCTAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGCTGGCAAGATGATTCAGTGGGTAAAGGCATTTGTTGTCTAGCC  700

seq1  TGGGTTCACTCTCCATCATCCACTAGAACCAACTTCTGTAAACTACCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCACTCTCCATCATCCACTAGAACCAACTTCTGTAAACTACCCTT  750

seq1  TGGCCTCCACGTGGGATGCATGTGTGTGCATGGGCAGGCACACGCGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCACGTGGGATGCATGTGTGTGCATGGGCAGGCACACGCGTGCA  800

seq1  CACACATTAAATATGATAGAA-TTTTTTGATGCTGTGGTAAGAGAAGTAT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACACATTAAATATGATAGAATTTTTTTGATGCTGTGGTAAGAGAAGTAT  850

seq1  TCCCCCCAAATCCCACTACCCATTAAAGGCGTAGTCAGTACTCAGGGTGA  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCCCCCAAATCCCACTACCCATTAAAGGCGTAGTCAGTACTCA-GGTGA  899

seq1  CACTGCAGATAGC-GGAGCCC-TCAGAAGGCCGAGCCTA-TCAT-GGAGC  945
      ||||||||||||| ||||||| ||||||||||||||||| |||| |||||
seq2  CACTGCAGATAGCGGGAGCCCTTCAGAAGGCCGAGCCTATTCATGGGAGC  949

seq1  -TTTTACAGC-GGTCTCTTGAAGGGGGC-TGTGAG-ACCCCGGCTCAGTT  991
       ||||||||| ||||||||||||||||| |||||| ||||||||||||||
seq2  TTTTTACAGCGGGTCTCTTGAAGGGGGCTTGTGAGAACCCCGGCTCAGTT  999

seq1  CTTCTCTGTTTTCTGGGATA--TAAGT-GGGATTGCCTAATCCTGGG--A  1036
      ||||||||||||   |||||   |||| |||| || |||||||||||  |
seq2  CTTCTCTGTTTTTCTGGATAATAAAGTGGGGAATGGCTAATCCTGGGGAA  1049

seq1  TGGAAATCTCTAGA  1050
      |||||   ||||||
seq2  TGGAATCTTCTAGA  1063