BAC Information

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BAC

Clone NameB6Ng01-326J17
Chromosome14 (Build37)
Map Location 113,590,443 - 113,721,543
singlet/doubletdoublet
Overlap geneTpm3-rs7
Upstream geneEG223186, LOC100043509
Downstream geneLOC100043510, LOC382947, LOC668791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326J17.bB6Ng01-326J17.g
ACCGA114374GA114375
length1,224244
definitionB6Ng01-326J17.b B6Ng01-326J17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,720,321 - 113,721,543)(113,590,443 - 113,590,686)
sequence
gaattcatactatagcatgctgtggatttatgaaaagtggttattgaaaa
gtacctagcagattagattttaattacaaacaaaagagtaaatgaagttc
tttgactctgctcagtgaatttgttattcctttggttatagccaagtcat
aacttactattagaagggcagttctttgatgtttatttcatgattatttt
tttagtttagttttgcttttctatatactaatgcaaagtatctttgaaaa
cattatgacaattcattttctaagactcaaaaaatgtgcatttaaaattt
tgtttaatattaatggatttatttttcatatctatgaaatacgctattta
gaatggttcaatgttactatttctaaaatatttaatttttcataatttcc
ctttatacatgaaatgtattacccattttctgtctaaaaagagctaaaaa
taaaatataatattctcacattttgacaatctgactaactacttaaagcc
tgactctgggaacttttaatatcttaaacgtttctaatgactcgaggcag
catattaatgaccattcttgtgctataaaattaactacttaacaacagaa
tgaaggagatatatacccatgcaagtatgccctgttttcaaaggacacac
tagatgcagaaactttcctgtcactcctatttcgtgacatgcgtgaatct
gagcatttgcccacttcttgcagtgtgttttcttctctgtgcttatgcca
ttaccaaatacctcttcttaccaaatgcctcttcttaccaaatacctctt
cttaccaaatgcctcttctttaccaccgtcacgccactcaccatcgcatt
acaacttgtaactgagttttcctaatcaccaggttgagagcatatttcta
aatcccttattgattttctattgaaacttaaaaagaaatcttatggagaa
tacaatgtcttttattatattctgtatatttcttctatgaaatcattttg
ttcttcatattcttcattcatatttaaaagtaaaaaacatgaaaattcat
gtatgccgcccacattgtaaagaagtgcaaagtgataacaggtgatttat
cctcacctcactcagttctgaactccttaagccaaaggtagggttgcaac
tggggctagaagaataaacattgctaggtagtactagtaaggttgtgata
cacaacctctcactgaatgtatat

ttttttactatttactttaatcatgttttctttatctcagaaaacatacc
tagttcattttctttggttaaatgcacttcagtattgaagagtctctctc
tctctctctctctctctctctctctctctctttctgtgtgtgtgtgtgtg
tgtgtgtgcgtgcgagtgtgtgtgtgtctgtgtgtgtgtctgagtgtata
tgtgtgtgtgtgtgagtgagtgtgtgtgtgtagataaatctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113720321_113721543
seq2: B6Ng01-326J17.b_47_1270 (reverse)

seq1  ATATACA-TCAGT-AGAG--TGTG-ATCACAACTATACTAGGTACTACTT  45
      ||||||| ||||| ||||  |||| ||||||||  ||||| ||||||| |
seq2  ATATACATTCAGTGAGAGGTTGTGTATCACAACCTTACTA-GTACTACCT  49

seq1  AGCCATGTTTAT--CTCTAGCCCAATATGCAAACCCTAACTTT-GCTTTA  92
      ||| ||||||||   |||||||| |  ||| ||||||| |||| |||| |
seq2  AGCAATGTTTATTCTTCTAGCCCCAGTTGC-AACCCTACCTTTGGCTTAA  98

seq1  GGAGTTCAG-ACTGAGTGAGGTTGGAGGATAAATCA-CTG-TATCACTTT  139
      ||||||||| ||||||||||||  |||||||||||| ||| |||||||||
seq2  GGAGTTCAGAACTGAGTGAGGT--GAGGATAAATCACCTGTTATCACTTT  146

seq1  GCACTTCTTTACAATGTGGGCGCATTACATGAATTTTCATTGTTTTTTTA  189
      ||||||||||||||||||||||   |||||||||||||| ||||||||  
seq2  GCACTTCTTTACAATGTGGGCGGCATACATGAATTTTCA-TGTTTTTT--  193

seq1  ACTTTTAAATATGAATGAAAGAATATGAAGAACAAAATGATTTCATAGAA  239
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTTTTAAATATGAATG-AAGAATATGAAGAACAAAATGATTTCATAGAA  242

seq1  GAAATATACAGAATATTAATAAAAGACATTTGTATTCTCCATAAGATTTC  289
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  GAAATATACAGAATA-TAATAAAAGACA-TTGTATTCTCCATAAGATTTC  290

seq1  TTTTTAAGTTTCAATAGAAAATCAATAAGGGATTTAGAAATATGCTCTCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTTTCAATAGAAAATCAATAAGGGATTTAGAAATATGCTCTCA  340

seq1  ACCTGGTGATTAGGAAAACTCAGTTACAAGTTGTAATGCGATGGTGAGTG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGATTAGGAAAACTCAGTTACAAGTTGTAATGCGATGGTGAGTG  390

seq1  GCGTGACGGTGGTAAAGAAGAGGCATTTGGTAAGAAGAGGTATTTGGTAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGACGGTGGTAAAGAAGAGGCATTTGGTAAGAAGAGGTATTTGGTAA  440

seq1  GAAGAGGCATTTGGTAAGAAGAGGTATTTGGTAATGGCATAAGCACAGAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCATTTGGTAAGAAGAGGTATTTGGTAATGGCATAAGCACAGAG  490

seq1  AAGAAAACACACTGCAAGAAGTGGGCAAATGCTCAGATTCACGCATGTCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACACACTGCAAGAAGTGGGCAAATGCTCAGATTCACGCATGTCA  540

seq1  CGAAATAGGAGTGACAGGAAAGTTTCTGCATCTAGTGTGTCCTTTGAAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATAGGAGTGACAGGAAAGTTTCTGCATCTAGTGTGTCCTTTGAAAA  590

seq1  CAGGGCATACTTGCATGGGTATATATCTCCTTCATTCTGTTGTTAAGTAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATACTTGCATGGGTATATATCTCCTTCATTCTGTTGTTAAGTAG  640

seq1  TTAATTTTATAGCACAAGAATGGTCATTAATATGCTGCCTCGAGTCATTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTATAGCACAAGAATGGTCATTAATATGCTGCCTCGAGTCATTA  690

seq1  GAAACGTTTAAGATATTAAAAGTTCCCAGAGTCAGGCTTTAAGTAGTTAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGTTTAAGATATTAAAAGTTCCCAGAGTCAGGCTTTAAGTAGTTAG  740

seq1  TCAGATTGTCAAAATGTGAGAATATTATATTTTATTTTTAGCTCTTTTTA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGTCAAAATGTGAGAATATTATATTTTATTTTTAGCTCTTTTTA  790

seq1  GACAGAAAATGGGTAATACATTTCATGTATAAAGGGAAATTATGAAAAAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAATGGGTAATACATTTCATGTATAAAGGGAAATTATGAAAAAT  840

seq1  TAAATATTTTAGAAATAGTAACATTGAACCATTCTAAATAGCGTATTTCA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTAGAAATAGTAACATTGAACCATTCTAAATAGCGTATTTCA  890

seq1  TAGATATGAAAAATAAATCCATTAATATTAAACAAAATTTTAAATGCACA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATGAAAAATAAATCCATTAATATTAAACAAAATTTTAAATGCACA  940

seq1  TTTTTTGAGTCTTAGAAAATGAATTGTCATAATGTTTTCAAAGATACTTT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGTCTTAGAAAATGAATTGTCATAATGTTTTCAAAGATACTTT  990

seq1  GCATTAGTATATAGAAAAGCAAAACTAAACTAAAAAAATAATCATGAAAT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTATATAGAAAAGCAAAACTAAACTAAAAAAATAATCATGAAAT  1040

seq1  AAACATCAAAGAACTGCCCTTCTAATAGTAAGTTATGACTTGGCTATAAC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCAAAGAACTGCCCTTCTAATAGTAAGTTATGACTTGGCTATAAC  1090

seq1  CAAAGGAATAACAAATTCACTGAGCAGAGTCAAAGAACTTCATTTACTCT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAATAACAAATTCACTGAGCAGAGTCAAAGAACTTCATTTACTCT  1140

seq1  TTTGTTTGTAATTAAAATCTAATCTGCTAGGTACTTTTCAATAACCACTT  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTAATTAAAATCTAATCTGCTAGGTACTTTTCAATAACCACTT  1190

seq1  TTCATAAATCCACAGCATGCTATAGTATGAATTC  1223
      ||||||||||||||||||||||||||||||||||
seq2  TTCATAAATCCACAGCATGCTATAGTATGAATTC  1224


seq1: chr14_113590443_113590686
seq2: B6Ng01-326J17.g_71_314

seq1  TTTTTTACTATTTACTTTAATCATGTTTTCTTTATCTCAGAAAACATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACTATTTACTTTAATCATGTTTTCTTTATCTCAGAAAACATACC  50

seq1  TAGTTCATTTTCTTTGGTTAAATGCACTTCAGTATTGAAGAGTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATTTTCTTTGGTTAAATGCACTTCAGTATTGAAGAGTCTCTCTC  100

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTGTGTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTGTGTGTGTGTGTG  150

seq1  TGTGTGTGCGTGCGAGTGTGTGTGTGTCTGTGTGTGTGTCTGAGTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCGTGCGAGTGTGTGTGTGTCTGTGTGTGTGTCTGAGTGTATA  200

seq1  TGTGTGTGTGTGTGAGTGAGTGTGTGTGTGTAGATAAATCTGGA  244
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGAGTGAGTGTGTGTGTGTAGATAAATCTGGA  244


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