BAC Information

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BAC

Clone NameB6Ng01-327B04
Chromosome14 (Build37)
Map Location 85,953,655 - 86,040,071
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327B04.bB6Ng01-327B04.g
ACCGA114713GA114714
length1,1081,167
definitionB6Ng01-327B04.b B6Ng01-327B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,953,655 - 85,954,770)(86,038,888 - 86,040,071)
sequence
gaattcagtgtttctattactagagagtcagcaatcatctggtggatggc
attccatcaggagccaggaaacatacagcctagttttggcattgttactg
actattaaataacagcaaacaattcctggatcatctgtgcctcatctaat
tcaccttcaaaacagaaggaaagactatttctttccataaggtttgatca
gggattataagtatgatcaaacaattttggacagagtttcatattcaaat
tcaaagtcaaatttgggtgtcagaagtttgggttcacattgagtagatat
tagaaattgacggatgattcattcttaaaataccatcaggggaaaactta
caaaactgaactgacaggagaaactgtggttgatgattatctccgagtga
ggatgtctctccatcagtgtgagtgctactacccgtttgatgacagcaca
gcacatgtgagtgcttgcgtgcttcactagccaggagcggaagcttctgg
aataacggttcagaagggttcatgtgcccttcataatactaagtacctca
ttttcctttgaaagtccaagttctttgcacacagttactacttaaaagaa
gatagcaattagaagtgaaaagggtagaaaatctttcataggcatagctt
tgaagtaataaaacattgagtgaatgtttaagagtaaaggagatggtgga
atgaagcactctgaaagagcccattacttattttctgcatagggttctca
agaataaactagttgtagtaattttcagttctagcctttaatgaagatca
tctggtaagggataggtaatacacacatatgcattttccaaactctggga
caactgaacaggaatttataggcatgggctctatgtgtcttggtttttat
agttgaactgacaattcttgtatgcattcaagtcttttttaatgttactt
tatttttattagatattttacttatttacatttcaaaggttatccccttt
tctggtttccccctctgtaaatcccctatcttcccatgcctgctctatga
gggtactcccccacccgccatgaagttcattctagtacagactacagtct
tagtacaa

gaattctatgattttaaaaagccttgaatatttgcatgaaattaggtaac
gtagtttcagctgttcaaacgatacatatttggtgaaccactaggacttt
gcaaaggtagaattgcatagaaaaatgtagttttcataattaaaaagaaa
accacaggaaaaaatgtactagagtttacttccaccagtactttgacatc
acataaggaatagacaaagtgacttgttggagtagttgagactatgagta
caaatttgaattctccacatctctgctgcaacttccttctgtctggggtg
tgagcttattgttctctctattgtcttcccactgtgtttgttcatctctg
ttcgtctctgttgtctgttccattcccattccaaggaagcagcatggctt
tccatgttttagaagcacagaaaacataatatggagaacgaagaagaaat
attttatggaaatatttgagttaattatatgaaggaataagttacttact
gaccttagcttacacacaatagcagttgaaactacacattataaatgtat
gtttttattttgctttcaaagtttgtgatatatttatttcacttaaggtt
ggtttcaacctgttgcacgcttccaataaataatttccacaatgagcata
cacaaacagtattctggtcaagggaatgagagctaaacatttagtttaag
atgtcgtagctgattatatgagacatacaaggcatattaagctgagaaac
attgttttcttaaaggaaggcttaactgaaactggctgagcacacagaaa
gagggccaacctaaaatgcagttgtaaatgaacttaaggcatattaattt
agttgcaaagccaggcaagaatttctctaaggcaagagggattttagaaa
atgatgttaccatatatgatgatcttgaaagcatactaaacattcaaaac
ttgggtttttacctttagatgatgatattatgacattaaagacaccttta
acctgattctagttttatattttttcctgtcttgacataaatgaactact
gattttagttgattacagtattctgatgatgaaaatgttagttgcttgag
accactcacatgatatgaaaccaattttatagaattttaagttcacatgc
tagccatatttagtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85953655_85954770
seq2: B6Ng01-327B04.b_48_1155

seq1  GAATTCAGTGTTTCTATTACTAGAGAGTCAGCAATCATCTGGTGGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTTCTATTACTAGAGAGTCAGCAATCATCTGGTGGATGGC  50

seq1  ATTCCATCAGGAGCCAGGAAACATACAGCCTAGTTTTGGCATTGTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCAGGAGCCAGGAAACATACAGCCTAGTTTTGGCATTGTTACTG  100

seq1  ACTATTAAATAACAGCAAACAATTCCTGGATCATCTGTGCCTCATCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAATAACAGCAAACAATTCCTGGATCATCTGTGCCTCATCTAAT  150

seq1  TCACCTTCAAAACAGAAGGAAAGACTATTTCTTTCCATAAGGTTTGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCAAAACAGAAGGAAAGACTATTTCTTTCCATAAGGTTTGATCA  200

seq1  GGGATTATAAGTATGATCAAACAATTTTGGACAGAGTTTCATATTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTATAAGTATGATCAAACAATTTTGGACAGAGTTTCATATTCAAAT  250

seq1  TCAAAGTCAAATTTGGGTGTCAGAAGTTTGGGTTCACATTGAGTAGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCAAATTTGGGTGTCAGAAGTTTGGGTTCACATTGAGTAGATAT  300

seq1  TAGAAATTGACGGATGATTCATTCTTAAAATACCATCAGGGGAAAACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTGACGGATGATTCATTCTTAAAATACCATCAGGGGAAAACTTA  350

seq1  CAAAACTGAACTGACAGGAGAAACTGTGGTTGATGATTATCTCCGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGAACTGACAGGAGAAACTGTGGTTGATGATTATCTCCGAGTGA  400

seq1  GGATGTCTCTCCATCAGTGTGAGTGCTACTACCCGTTTGATGACAGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTCTCCATCAGTGTGAGTGCTACTACCCGTTTGATGACAGCACA  450

seq1  GCACATGTGAGTGCTTGCGTGCTTCACTAGCCAGGAGCGGAAGCTTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTGAGTGCTTGCGTGCTTCACTAGCCAGGAGCGGAAGCTTCTGG  500

seq1  AATAACGGTTCAGAAGGGTTCATGTGCCCTTCATAATACTAAGTACCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGGTTCAGAAGGGTTCATGTGCCCTTCATAATACTAAGTACCTCA  550

seq1  TTTTCCTTTGAAAGTCCAAGTTCTTTGCACACAGTTACTACTTAAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTGAAAGTCCAAGTTCTTTGCACACAGTTACTACTTAAAAGAA  600

seq1  GATAGCAATTAGAAGTGAAAAGGGTAGAAAATCTTTCATAGGCATAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCAATTAGAAGTGAAAAGGGTAGAAAATCTTTCATAGGCATAGCTT  650

seq1  TGAAGTAATAAAACATTGAGTGAATGTTTAAGAGTAAAGGAGATGGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAATAAAACATTGAGTGAATGTTTAAGAGTAAAGGAGATGGTGGA  700

seq1  ATGAAGCACTCTGAAAGAGCCCATTACTTATTTTCTGCATAGGGTTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCACTCTGAAAGAGCCCATTACTTATTTTCTGCATAGGGTTCTCA  750

seq1  AGAATAAACTAGTTGTAGTAATTTTCAGTTCTAGCCTTTAATGAAGATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAACTAGTTGTAGTAATTTTCAGTTCTAGCCTTTAATGAAGATCA  800

seq1  TCTGGTAAGGGATAGGTAATACACACATATGCATTTTCCAAACTCTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAAGGGATAGGTAATACACACATATGCATTTTCCAAACTCTGGGA  850

seq1  CAACTGAACAGGAATTTATAGGCATGGGCTCTATGTGTCTTGGTTTTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAACAGGAATTTATAGGCATGGGCTCTATGTGTCTTGGTTTTTAT  900

seq1  AGTTGAACTGACAATTCTTGTATGCATTCAAGTCTTTTTTAATGTTACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAACTGACAATTCTTGTATGCATTCAAGTCTTTTTTAATGTTACTT  950

seq1  TATTTTTTATTAGATATTTTACTTATTTACATTTCAAAGGTTATCCCCTT  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TTTTTATTAGATATTTTACTTATTTACATTTCAAAGGTTATCCCCTT  999

seq1  TTCTGGTTT-CCCCTCTGTAAATCCCCTATCCTTCCCCATGCCTGCTTCT  1049
      ||||||||| |||||||||||||||||||||  | ||||||||||| |||
seq2  TTCTGGTTTCCCCCTCTGTAAATCCCCTATC--TTCCCATGCCTGC-TCT  1046

seq1  ATGAGGGTACTCCCCCACCCGCCATGAAAGTTTCAATTCTAGTACAGACT  1099
      |||||||||||||||||||||||||| |||||   |||||||||||||||
seq2  ATGAGGGTACTCCCCCACCCGCCATG-AAGTT--CATTCTAGTACAGACT  1093

seq1  ACCAGTCCTAGGTACAA  1116
      | ||||| || ||||||
seq2  A-CAGTCTTA-GTACAA  1108


seq1: chr14_86038888_86040071
seq2: B6Ng01-327B04.g_66_1232 (reverse)

seq1  TACA-TAAATATTTGCTAGGCATGTGAACTTAAAAATTCCTAATAAAATA  49
      |||| |||||| | |||| |||||||||||| |||||||   ||||||| 
seq2  TACACTAAATA-TGGCTA-GCATGTGAACTT-AAAATTC--TATAAAAT-  44

seq1  TGGTTTCATATCATTGTGAGTGGGTTCTCCAGCAACCTACATTTTCATCA  99
      ||||||||||||| |||||||||  |||| ||||||  ||||||||||||
seq2  TGGTTTCATATCA-TGTGAGTGG--TCTCAAGCAACTAACATTTTCATCA  91

seq1  ACCAAGAATACTGTAATCAACTAAAATCAGTAGTTTCATTTATGTCAAGA  149
       |  ||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TC--AGAATACTGTAATCAACTAAAATCAGTAG-TTCATTTATGTCAAG-  137

seq1  ACAGGAAAAAATATAAAACTAGAATCAGGTTTAAAGGTTGTCTTTAATTG  199
      ||||||||||||||||||||||||||||| ||||||| ||||||||| ||
seq2  ACAGGAAAAAATATAAAACTAGAATCAGG-TTAAAGG-TGTCTTTAA-TG  184

seq1  TCATAATTATCATCATCTAAAGGTAAAAACCCAAGTTTTGAATGTTTAGT  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAA-TATCATCATCTAAAGGTAAAAACCCAAGTTTTGAATGTTTAGT  233

seq1  ATGCTTTCAAGATCATCATATATGGTAACATCATTTTCTAAAATCCCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCAAGATCATCATATATGGTAACATCATTTTCTAAAATCCCTCT  283

seq1  TGCCCTTAGAGAAATTCTTGCCTGGCTTTGCAACTAAATTAATATGCCTT  349
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-CCTTAGAGAAATTCTTGCCTGGCTTTGCAACTAAATTAATATGCCTT  332

seq1  AAGTTCATTTACAACTGCATTTTAGGTTGGCCCTCTTTCTGTGTGCTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATTTACAACTGCATTTTAGGTTGGCCCTCTTTCTGTGTGCTCAG  382

seq1  CCAGTTTCAGTTAAGCCTTCCTTTAAGAAAACAATGTTTCTCAGCTTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCAGTTAAGCCTTCCTTTAAGAAAACAATGTTTCTCAGCTTAAT  432

seq1  ATGCCTTGTATGTCTCATATAATCAGCTACGACATCTTAAACTAAATGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGTATGTCTCATATAATCAGCTACGACATCTTAAACTAAATGTT  482

seq1  TAGCTCTCATTCCCTTGACCAGAATACTGTTTGTGTATGCTCATTGTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTCATTCCCTTGACCAGAATACTGTTTGTGTATGCTCATTGTGGA  532

seq1  AATTATTTATTGGAAGCGTGCAACAGGTTGAAACCAACCTTAAGTGAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTATTGGAAGCGTGCAACAGGTTGAAACCAACCTTAAGTGAAAT  582

seq1  AAATATATCACAAACTTTGAAAGCAAAATAAAAACATACATTTATAATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATCACAAACTTTGAAAGCAAAATAAAAACATACATTTATAATGT  632

seq1  GTAGTTTCAACTGCTATTGTGTGTAAGCTAAGGTCAGTAAGTAACTTATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTCAACTGCTATTGTGTGTAAGCTAAGGTCAGTAAGTAACTTATT  682

seq1  CCTTCATATAATTAACTCAAATATTTCCATAAAATATTTCTTCTTCGTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATATAATTAACTCAAATATTTCCATAAAATATTTCTTCTTCGTTC  732

seq1  TCCATATTATGTTTTCTGTGCTTCTAAAACATGGAAAGCCATGCTGCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTATGTTTTCTGTGCTTCTAAAACATGGAAAGCCATGCTGCTTC  782

seq1  CTTGGAATGGGAATGGAACAGACAACAGAGACGAACAGAGATGAACAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATGGGAATGGAACAGACAACAGAGACGAACAGAGATGAACAAAC  832

seq1  ACAGTGGGAAGACAATAGAGAGAACAATAAGCTCACACCCCAGACAGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGAAGACAATAGAGAGAACAATAAGCTCACACCCCAGACAGAAG  882

seq1  GAAGTTGCAGCAGAGATGTGGAGAATTCAAATTTGTACTCATAGTCTCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGCAGCAGAGATGTGGAGAATTCAAATTTGTACTCATAGTCTCAA  932

seq1  CTACTCCAACAAGTCACTTTGTCTATTCCTTATGTGATGTCAAAGTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCAACAAGTCACTTTGTCTATTCCTTATGTGATGTCAAAGTACTG  982

seq1  GTGGAAGTAAACTCTAGTACATTTTTTCCTGTGGTTTTCTTTTTAATTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTAAACTCTAGTACATTTTTTCCTGTGGTTTTCTTTTTAATTAT  1032

seq1  GAAAACTACATTTTTCTATGCAATTCTACCTTTGCAAAGTCCTAGTGGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTACATTTTTCTATGCAATTCTACCTTTGCAAAGTCCTAGTGGTT  1082

seq1  CACCAAATATGTATCGTTTGAACAGCTGAAACTACGTTACCTAATTTCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATATGTATCGTTTGAACAGCTGAAACTACGTTACCTAATTTCAT  1132

seq1  GCAAATATTCAAGGCTTTTTAAAATCATAGAATTC  1184
      |||||||||||||||||||||||||||||||||||
seq2  GCAAATATTCAAGGCTTTTTAAAATCATAGAATTC  1167


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