BAC Information

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BAC

Clone NameB6Ng01-327K11
Chromosome14 (Build37)
Map Location 82,043,337 - 82,184,682
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327K11.bB6Ng01-327K11.g
ACCGA115143GA115144
length1,178214
definitionB6Ng01-327K11.b B6Ng01-327K11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,043,337 - 82,044,511)(82,184,467 - 82,184,682)
sequence
gaattcactaatatcctaaaagaaaaagtcatagaaaagttatcaaatct
gtctgtgtaaaaatgttgaaataggaaattaaatatttattcagagttgt
aaaaacaattgaatcatttctgaatatcaaattcttttgaatgaattata
atatatttgatttgtacaatcaataatttcattttcatagggaaataatt
tagtttaaagtgaaaacaattataaatcttgtataaaatttaatttaaaa
aaatcactggatagaagacaaatctagattctatctaatgttaccaaaca
gagcaatattactagatttgaaactgcttctaattcctaactgtcacaga
atattttgattagaaaaaacaccttcaatttagtacttcagctaaaagca
atgcatttctgtttaaattttatttatttttatattattttaaatatgta
ataggttacaacatttcttctttctgattcttccttcaaaccctccctct
cacacacttgctgggttctccaacagggtcttgcattcttgtgcagtcaa
tataatgttccttgtacttatacattcagggttcatcatttactactgga
caaacatttgtgtgctcttccttgggcaagatcacctctttgcttccagt
atgctcacttgcctacagttctgcaggattgaggcctcatcgacttttcc
aaacattcactgttgggaatcactgtttttatgttgttttcttatgtgtt
ggattttaattttttttttctttactttgaaaattgtgtgcagtttagtg
aattctaagtttaactgtgtcatgttagggtatttgctcagtttttccta
ctgtacatatgaaagcataaagaatatctcacacccatttttacataatt
ttttcaacctacagagtactgagtaaagaaaataaaataaaaagagtagt
gaatttgggtgaattaaattgatctgcactagggctggagtgatggctta
gcggttagaacactgacttgttcttcttgaagtctgagttcaattccagc
gaccacatgtgaccccacaccatccgtaatgggatctgacaccccctcct
tcttggtgtgtgtctgaaagacatcttacagggtacctttacatatagtt
attaaataatctttttaaactgatctgc

tacatataccttaattttcctgtagcatttgcttcaatatattggggggg
gatgtggggaaatttttttttcaatattaagcctgtctaacttaattcct
gctccttcaaaataactactttgctttggattcatggtcccaacatttgg
tgctttgtcctatagaaagaattccctgtgatctttttctttggcctctt
cattacttgacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82043337_82044511
seq2: B6Ng01-327K11.b_47_1224

seq1  GAATTCACTAATATCCTAAAAGAAAAAGTCATAGAAAAGTTATCAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAATATCCTAAAAGAAAAAGTCATAGAAAAGTTATCAAATCT  50

seq1  GTCTGTGTAAAAATGTTGAAATAGGAAATTAAATATTTATTCAGAGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTAAAAATGTTGAAATAGGAAATTAAATATTTATTCAGAGTTGT  100

seq1  AAAAACAATTGAATCATTTCTGAATATCAAATTCTTTTGAATGAATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATTGAATCATTTCTGAATATCAAATTCTTTTGAATGAATTATA  150

seq1  ATATATTTGATTTGTACAATCAATAATTTCATTTTCATAGGGAAATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTGATTTGTACAATCAATAATTTCATTTTCATAGGGAAATAATT  200

seq1  TAGTTTAAAGTGAAAACAATTATAAATCTTGTATAAAATTTAATTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAAGTGAAAACAATTATAAATCTTGTATAAAATTTAATTTAAAA  250

seq1  AAATCACTGGATAGAAGACAAATCTAGATTCTATCTAATGTTACCAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTGGATAGAAGACAAATCTAGATTCTATCTAATGTTACCAAACA  300

seq1  GAGCAATATTACTAGATTTGAAACTGCTTCTAATTCCTAACTGTCACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATATTACTAGATTTGAAACTGCTTCTAATTCCTAACTGTCACAGA  350

seq1  ATATTTTGATTAGAAAAAACACCTTCAATTTAGTACTTCAGCTAAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGATTAGAAAAAACACCTTCAATTTAGTACTTCAGCTAAAAGCA  400

seq1  ATGCATTTCTGTTTAAATTTTATTTATTTTTATATTATTTTAAATATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTCTGTTTAAATTTTATTTATTTTTATATTATTTTAAATATGTA  450

seq1  ATAGGTTACAACATTTCTTCTTTCTGATTCTTCCTTCAAACCCTCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTACAACATTTCTTCTTTCTGATTCTTCCTTCAAACCCTCCCTCT  500

seq1  CACACACTTGCTGGGTTCTCCAACAGGGTCTTGCATTCTTGTGCAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTTGCTGGGTTCTCCAACAGGGTCTTGCATTCTTGTGCAGTCAA  550

seq1  TATAATGTTCCTTGTACTTATACATTCAGGGTTCATCATTTACTACTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTTCCTTGTACTTATACATTCAGGGTTCATCATTTACTACTGGA  600

seq1  CAAACATTTGTGTGCTCTTCCTTGGGCAAGATCACCTCTTTGCTTCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTTGTGTGCTCTTCCTTGGGCAAGATCACCTCTTTGCTTCCAGT  650

seq1  ATGCTCACTTGCCTACAGTTCTGCAGGATTGAGGCCTCATCGACTTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCACTTGCCTACAGTTCTGCAGGATTGAGGCCTCATCGACTTTTCC  700

seq1  AAACATTCACTGTTGGGAATCACTGTTTTTATGTTGTTTTCTTATGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCACTGTTGGGAATCACTGTTTTTATGTTGTTTTCTTATGTGTT  750

seq1  GGATTTTAATTTTTTTTTTCTTTACTTTGAAAATTGTGTGCAGTTTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAATTTTTTTTTTCTTTACTTTGAAAATTGTGTGCAGTTTAGTG  800

seq1  AATTCTAAGTTTAACTGTGTCATGTTAGGGTATTTGCTCAGTTTTTCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAGTTTAACTGTGTCATGTTAGGGTATTTGCTCAGTTTTTCCTA  850

seq1  CTGTACATATGAAAGCATAAAGAATATCTCACACCCATTTTTACATAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATATGAAAGCATAAAGAATATCTCACACCCATTTTTACATAATT  900

seq1  TTTTCAACCTACAGAGTACTGAGTAAAGAAAATAAAAATAAAAAGAGTAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTCAACCTACAGAGTACTGAGTAAAGAAAAT-AAAATAAAAAGAGTAG  949

seq1  TGAATTTGGGTGAATTAAATTGATCTGCACTAGGGCTGGAGTGATGGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGGGTGAATTAAATTGATCTGCACTAGGGCTGGAGTGATGGCTT  999

seq1  AGCGGTTAAGAACACTGAC-TGTTCTTCTGAAGGTCCTGAGTTCAAATCC  1049
      ||||||| ||||||||||| |||||||||  | || |||||||| ||| |
seq2  AGCGGTT-AGAACACTGACTTGTTCTTCTTGAAGT-CTGAGTTC-AATTC  1046

seq1  CAGCGACCACATGGTGACTCACAACCATCCGTAATGGGATCTGACACCC-  1098
      |||||||||||| ||||| |   |||||||||||||||||||||||||| 
seq2  CAGCGACCACAT-GTGACCCCACACCATCCGTAATGGGATCTGACACCCC  1095

seq1  -----TCTTCTTGTGTGTCTG-AAGACATC-TACAGTGTAC--TTACATA  1139
           ||||  |||||||||| |||||||| ||||| ||||  |||||||
seq2  CTCCTTCTTGGTGTGTGTCTGAAAGACATCTTACAGGGTACCTTTACATA  1145

seq1  TAGTAATAAATAAATCTTTTTAAAAAATTGATCTGC  1175
      |||| || ||  |||||||||   ||| ||||||||
seq2  TAGTTATTAAATAATCTTTTT---AAACTGATCTGC  1178


seq1: chr14_82184467_82184682
seq2: B6Ng01-327K11.g_75_288 (reverse)

seq1  ATTGTCAAGTACTGAAGAGGCCATAGAAAAAGATCACAGGGAATTCTTTC  50
      | ||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  AATGTCAAGTAATGAAGAGGCCAAAGAAAAAGATCACAGGGAATTCTTTC  50

seq1  TATAGGACAAAGCACCAAATGTTGGGACCATGAATCCAAAGCAAAGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGACAAAGCACCAAATGTTGGGACCATGAATCCAAAGCAAAGTAGT  100

seq1  TATTTTGAAGGAGCAGGAATTAAGTTTGACAGGCTTAATATTTGAAAAAA  150
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TATTTTGAAGGAGCAGGAATTAAGTTAGACAGGCTTAATA-TTGAAAAAA  149

seq1  AATATTTCCCCACATCCCCCCCCAATATATTGAAGCAAATGCTACAGGAA  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-ATTTCCCCACATCCCCCCCCAATATATTGAAGCAAATGCTACAGGAA  198

seq1  AATTAAGGTATATGTA  216
      ||||||||||||||||
seq2  AATTAAGGTATATGTA  214


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