BAC Information

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BAC

Clone NameB6Ng01-327L15
Chromosome14 (Build37)
Map Location 88,875,091 - 88,876,243
singlet/doubletsinglet
Overlap genenone
Upstream geneTdrd3, LOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327L15.bB6Ng01-327L15.g
ACCGA115191GA115192
length1,1591,178
definitionB6Ng01-327L15.b B6Ng01-327L15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaaccattcatcagtgagcagttgctgatccacgtttttgg
attttccatgcccttcatttcttttcctcaacccaaccaccttacttctg
atgattttcctgctcattatcacctctgccagaagtgagaaagaagaacg
tgaaattcaaatgagtcgaaaatggcttttaaattttattttgagtataa
ggagagaaagttgaaaatgttagctataattaagcctgggtttttctagt
gacttcatccagatatacttatctttgttatgtgatgttcaattttgaaa
agaactatttgctcctaatagcttccttcttcttctacctacagaaaatt
tcctgaaatataaaagatactaataaagaaaaatatttacaaaagtccca
tttatgaactccactgaatagcaatacatgctatagaacgtaaaatgtta
taacaatttgcttatctgccaggcttggtttgtaaatgtcatttatctat
tttgttgaaggtctagttttttagcaaataactaatgattccctaataga
ttcataatttaatttttaaattgcatagagaactaaaacaacatatttta
gttctcctaatgtactttaccaaaattaatagcttcttctaaaaattgca
tatttgaaaattagtaaataatctaaaaaagggggaattattgcttaatg
caatacttaaaatcaggatttgattataaaattagagagtaagaaagagt
gctatttatttaagctagctttaatatcaaaaaatcttgatctcaaaatt
tagtacatttttttaatgggttaattttaaaatgggctattttgagtcca
tggatatgttgctctcactttcagttaataagtaaaaaagaaaataagct
atgtgatcctaaaggtctgaaagagtacttaaagggctgttaatattgct
tcaccaataatttcacctacctcacagttcaagcaacttactttgggccc
ctgaaatgaacgtgatggttgagaaagagaattgacacccctcaagttgt
actctagcctccatatgtggcccatgaccaccacatgctcttccacacac
aagaatcacacaggtccacatactaatgagattatttccatgtttcagta
atatatata

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
acttcaggatctgttgttatgtctcccttttcagttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcttttggttaattctttga
atagttcttcttgtttccacttggttaatttcacccctgagtttgattat
ttcctgccatctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctcctcctcccgtttct
tctggagtactcagagctatgagtttccctcttagaaatgctttcattgt
gtcccaagggtttgggtacgttgtggcttcatttcattaacttcttaaaa
gtcttagtcctttctttatccttccttggaccagtatcattgaggaggag
tgttgatcagttccacggtaagtgtgtgggcttcccaattctctgaatgc
gtgatggatatctgcgttagtgacaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_88875091_88876243
seq2: B6Ng01-327L15.b_49_1207 (reverse)

seq1  TATATATATATACTGAAAACATG--AATAATCTTCATTTAGTATGTG--A  46
      ||||||||| ||||| |||||||  ||||||| ||| ||||||||||   
seq2  TATATATAT-TACTG-AAACATGGAAATAATC-TCA-TTAGTATGTGGAC  46

seq1  CTGTGTGAT--CTGTGTGTGGAAGAGGCATGTG--TGTCATGGGCCACAT  92
      |||||||||   ||||||||||||| |||||||   ||||||||||||||
seq2  CTGTGTGATTCTTGTGTGTGGAAGA-GCATGTGGTGGTCATGGGCCACAT  95

seq1  ATGGAGGCTAGAGTACAACTTGA-GGGTGTCAATTCTCTTTCTCCACCAT  141
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  ATGGAGGCTAGAGTACAACTTGAGGGGTGTCAATTCTCTTTCTCAACCAT  145

seq1  CACGTTCATTTCAGGGGCCCAAAGTAAGTTGCTTGAACTGTGAGGTAGGT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTCATTTCAGGGGCCCAAAGTAAGTTGCTTGAACTGTGAGGTAGGT  195

seq1  GAAATTATTGGTGAAGCAATATTAACAGCCCTTTAAGTACTCTTTCAGAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATTGGTGAAGCAATATTAACAGCCCTTTAAGTACTCTTTCAGAC  245

seq1  C-TTAGGATCACATAGCTTATTTTCTTTTTTACTTATTAACTGAAAGTGA  290
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGATCACATAGCTTATTTTCTTTTTTACTTATTAACTGAAAGTGA  295

seq1  GAGCAACATATCCATGGACTCAAAATAGCCCATTTTAAAATTAACCCATT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACATATCCATGGACTCAAAATAGCCCATTTTAAAATTAACCCATT  345

seq1  -AAAAAATGTACTAAATTTTGAGATCAAGATTTTTTGATATTAAAGCTAG  389
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTACTAAATTTTGAGATCAAGATTTTTTGATATTAAAGCTAG  395

seq1  CTTAAATAAATAGCACTCTTTCTTACTCTCTAATTTTATAATCAAATCCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATAAATAGCACTCTTTCTTACTCTCTAATTTTATAATCAAATCCT  445

seq1  GATTTTAAGTATTGCATTAAGCAATAATTCCCCCTTTTTTAGATTATTTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAGTATTGCATTAAGCAATAATTCCCCCTTTTTTAGATTATTTA  495

seq1  CTAATTTTCAAATATGCAATTTTTAGAAGAAGCTATTAATTTTGGTAAAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTCAAATATGCAATTTTTAGAAGAAGCTATTAATTTTGGTAAAG  545

seq1  TACATTAGGAGAACTAAAATATGTTGTTTTAGTTCTCTATGCAATTTAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGGAGAACTAAAATATGTTGTTTTAGTTCTCTATGCAATTTAAA  595

seq1  AATTAAATTATGAATCTATTAGGGAATCATTAGTTATTTGCTAAAAAACT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTATGAATCTATTAGGGAATCATTAGTTATTTGCTAAAAAACT  645

seq1  AGACCTTCAACAAAATAGATAAATGACATTTACAAACCAAGCCTGGCAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTCAACAAAATAGATAAATGACATTTACAAACCAAGCCTGGCAGA  695

seq1  TAAGCAAATTGTTATAACATTTTACGTTCTATAGCATGTATTGCTATTCA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAATTGTTATAACATTTTACGTTCTATAGCATGTATTGCTATTCA  745

seq1  GTGGAGTTCATAAATGGGACTTTTGTAAATATTTTTCTTTATTAGTATCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTCATAAATGGGACTTTTGTAAATATTTTTCTTTATTAGTATCT  795

seq1  TTTATATTTCAGGAAATTTTCTGTAGGTAGAAGAAGAAGGAAGCTATTAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTCAGGAAATTTTCTGTAGGTAGAAGAAGAAGGAAGCTATTAG  845

seq1  GAGCAAATAGTTCTTTTCAAAATTGAACATCACATAACAAAGATAAGTAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATAGTTCTTTTCAAAATTGAACATCACATAACAAAGATAAGTAT  895

seq1  ATCTGGATGAAGTCACTAGAAAAACCCAGGCTTAATTATAGCTAACATTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATGAAGTCACTAGAAAAACCCAGGCTTAATTATAGCTAACATTT  945

seq1  TCAACTTTCTCTCCTTATACTCAAAATAAAATTTAAAAGCCATTTTCGAC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTCTCTCCTTATACTCAAAATAAAATTTAAAAGCCATTTTCGAC  995

seq1  TCATTTGAATTTCACGTTCTTCTTTCTCACTTCTGGCAGAGGTGATAATG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAATTTCACGTTCTTCTTTCTCACTTCTGGCAGAGGTGATAATG  1045

seq1  AGCAGGAAAATCATCAGAAGTAAGGTGGTTGGGTTGAGGAAAAGAAATGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAAATCATCAGAAGTAAGGTGGTTGGGTTGAGGAAAAGAAATGA  1095

seq1  AGGGCATGGAAAATCCAAAAACGTGGATCAGCAACTGCTCACTGATGAAT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGGAAAATCCAAAAACGTGGATCAGCAACTGCTCACTGATGAAT  1145

seq1  GGTTTACTGAATTC  1153
      ||||||||||||||
seq2  GGTTTACTGAATTC  1159


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