BAC Information

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BAC

Clone NameB6Ng01-328G03
Chromosome14 (Build37)
Map Location 33,906,668 - 33,907,852
singlet/doubletsinglet
Overlap genenone
Upstream geneOxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18
Downstream geneEG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328G03.bB6Ng01-328G03.g
ACCGA115665GA115666
length1,1831,223
definitionB6Ng01-328G03.b B6Ng01-328G03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagacttctgtgcaagacttaaaatgagcttcagaatactgctg
tttccctttacttggggatagcttcagtgtgtactcttgggggagacaat
ctttgaaatgataaggtcaaaactatttttcagtgagaagcagcttgacc
cttgaagcatcagaaaaactctaaaggacacgctagcaatgtttaacaga
gatttacattgaagactgataacaggcatctttcatctcagcactcagga
ggcataggcagtaaatttctgtgacttcatggccagcctggtctatacag
ggagttcccagaccaatcagggatacatagcaagaccctggctcaaaaaa
taagaaggtgtgggtagaattttcaccacgaaatccatgtgagaaggtct
ggccaactatcatcttcgaccccctgtccatccactcattctctggctgt
ttgttgtgatcaattcaaggaacacacacctcacagcagaagcttggaga
cgagtggttccatttctctctctttcattctggccctatcacccattaag
tccctgatcttgctgacctttcagttctgtcctctgagcagaaaaaaata
gcaagttccatttttgaggcttggcctaagaagaggtagggctcagcaat
gctgccccagagaccattctgtgaccgtgagactgttttacttctgcctc
gtcccatgcagggggacactagcctcatgctgtggccatatttggaaata
tggccaatgtgaaaatccaaaactgtaatttttaacgatttaagttcttc
tgtattgttatgtgtgtaagtgtatatgaatgaacatgcttgagagtgtg
catgcacctgtgtttacatgtggacagagaacagagggcgatgtcagaat
gtctgttgctctccactttgagagacagagtctctctcactaaatctgga
ggtcactgatttggctacactagttgaccagagaaccctacagataaatg
gtctctgctctccagctttagggtcacagaaactgttttagtgttgtctg
gcttttcatatggatattggaagatccaagcttatgttggcaagcactta
ccacctggaccattctctcccagcttcagtaggtaatttaccatgggagt
ggttcccatctggcagcacagaccaagggtcaa
gaattctactggattttcaaaggtgtcctaataccagtacttgttaagtt
attccacaaaacaacattaagggacattatccaaatcattttttgaggtc
acagtcacagtggtacccaaaccatacaaatattcaacagagagaattat
ggaacagtttccctcatgaacattgatagaaaaatactcaacaaaacact
cacaaactaaacctaagaacacataagaaagatgatccaccgtgatcaac
taggcttcatccgagagatgcagggacggttcaacacacaaaattctgtt
attgtagtttgccagatacataaactgaaagggaaaaatgtgatcatctc
atcagatgctaaaaaagcctttgataaagtccaacaccctttcataatta
aagtcttggagtgatcagaaatacaagggacatacttaaacacaataaat
ataacttacagcaagcctatagctaacaaattaaatggagggaaactcaa
agcaattccactaaaatcaggaacaagacaagactgcagactctctccat
atctattcaacacagtacttaaagtgctggccagagcaataaaacaattg
aaggaggccaaggagatataaactggaaagggagaaatcaaagtattgct
attcaaagatgatatgatagtatacataagtgacctaaaaatttctacca
ggaaattcttatagctgataataccttcagcaaaatggctggatactcga
gtaacaacaacaacaaaaaaaatcagtatccctttctaatacaaacaata
aacaggctgagaaagaaatcagggaaacaacacccttcataatagccaca
aataatataaaataccttggtgtaactctaaccaagcaagtgaaatatct
atatgacaagaacttcaagttcctgaagaaagaaattgaaaaaaaaatca
gaagatgggaaagatctcccatgctcatggataggtaggataaacatagt
ggaaatggccatcttaccaaagcaatctacaaattcaatgcaattccatc
aaaattccagcacaattctttacagaccttgaaagaacaattctgactca
tatgtaaaacctaaaaaccagaaagctacaaaacatctgtcaataaaaga
aactctgagtcacatctctgattcaactccacaatgaaaacaattgtgta
taaaaacctggccatagatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33906668_33907852
seq2: B6Ng01-328G03.b_45_1227

seq1  GAATTCTAGACTTCTGTGCAAGACTTAAAATGAGCTTCAGAATACTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACTTCTGTGCAAGACTTAAAATGAGCTTCAGAATACTGCTG  50

seq1  TTTCCCTTTACTTGGGGATAGCTTCAGTGTGTACTCTTGGGGGAGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTACTTGGGGATAGCTTCAGTGTGTACTCTTGGGGGAGACAAT  100

seq1  CTTTGAAATGATAAGGTCAAAACTATTTTTCAGTGAGAAGCAGCTTGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATGATAAGGTCAAAACTATTTTTCAGTGAGAAGCAGCTTGACC  150

seq1  CTTGAAGCATCAGAAAAACTCTAAAGGACACGCTAGCAATGTTTAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGCATCAGAAAAACTCTAAAGGACACGCTAGCAATGTTTAACAGA  200

seq1  GATTTACATTGAAGACTGATAACAGGCATCTTTCATCTCAGCACTCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACATTGAAGACTGATAACAGGCATCTTTCATCTCAGCACTCAGGA  250

seq1  GGCATAGGCAGTAAATTTCTGTGACTTCATGGCCAGCCTGGTCTATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGGCAGTAAATTTCTGTGACTTCATGGCCAGCCTGGTCTATACAG  300

seq1  GGAGTTCCCAGACCAATCAGGGATACATAGCAAGACCCTGGCTCAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCCAGACCAATCAGGGATACATAGCAAGACCCTGGCTCAAAAAA  350

seq1  TAAGAAGGTGTGGGTAGAATTTTCACCACGAAATCCATGTGAGAAGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGTGTGGGTAGAATTTTCACCACGAAATCCATGTGAGAAGGTCT  400

seq1  GGCCAACTATCATCTTCGACCCCCTGTCCATCCACTCATTCTCTGGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTATCATCTTCGACCCCCTGTCCATCCACTCATTCTCTGGCTGT  450

seq1  TTGTTGTGATCAATTCAAGGAACACACACCTCACAGCAGAAGCTTGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGATCAATTCAAGGAACACACACCTCACAGCAGAAGCTTGGAGA  500

seq1  CGAGTGGTTCCATTTCTCTCTCTTTCATTCTGGCCCTATCACCCATTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGGTTCCATTTCTCTCTCTTTCATTCTGGCCCTATCACCCATTAAG  550

seq1  TCCCTGATCTTGCTGACCTTTCAGTTCTGTCCTCTGAGCAGAAAAAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATCTTGCTGACCTTTCAGTTCTGTCCTCTGAGCAGAAAAAAATA  600

seq1  GCAAGTTCCATTTTTGAGGCTTGGCCTAAGAAGAGGTAGGGCTCAGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCCATTTTTGAGGCTTGGCCTAAGAAGAGGTAGGGCTCAGCAAT  650

seq1  GCTGCCCCAGAGACCATTCTGTGACCGTGAGACTGTTTTACTTCTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCCAGAGACCATTCTGTGACCGTGAGACTGTTTTACTTCTGCCTC  700

seq1  GTCCCATGCAGGGGGACACTAGCCTCATGCTGTGGCCATATTTGGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGCAGGGGGACACTAGCCTCATGCTGTGGCCATATTTGGAAATA  750

seq1  TGGCCAATGTGAAAATCCAAAACTGTAATTTTTAACGATTTAAGTTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAATGTGAAAATCCAAAACTGTAATTTTTAACGATTTAAGTTCTTC  800

seq1  TGTATTGTTATGTGTGTAAGTGTATATGAATGAACATGCTTGAGAGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGTTATGTGTGTAAGTGTATATGAATGAACATGCTTGAGAGTGTG  850

seq1  CATGCACCTGTGTTTACATGTGGACAGAGAACAGAGGGCGATGTCAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCTGTGTTTACATGTGGACAGAGAACAGAGGGCGATGTCAGAAT  900

seq1  GTCTGTTGCTCTCCACTTTGAGAGACAGAGTCTCTCTCACTAAATCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTGCTCTCCACTTTGAGAGACAGAGTCTCTCTCACTAAATCTGGA  950

seq1  GGTCACTGATTTGGCTACACTAGTTGACCAGAGAACCCTACAGATAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTGATTTGGCTACACTAGTTGACCAGAGAACCCTACAGATAAATG  1000

seq1  GTCTCTGCCTCTCCAGCTTTAGGGTCACAGAAACTG-TCTAGTG-TGTCT  1048
      ||||||| |||||||||||||||||||||||||||| | ||||| |||||
seq2  GTCTCTG-CTCTCCAGCTTTAGGGTCACAGAAACTGTTTTAGTGTTGTCT  1049

seq1  GGCTTTTCATATGGATATTGG-AGATCCAAGCTTATG-TGGCAAGCACTT  1096
      ||||||||||||||||||||| ||||||||||||||| |||||||||| |
seq2  GGCTTTTCATATGGATATTGGAAGATCCAAGCTTATGTTGGCAAGCAC-T  1098

seq1  TACCAACTGAGCCA-TCTCTCCAGCCTCCAGTTAGTTAAATTTTACATGG  1145
      ||||| |||  ||| |||||||   || ||||  ||  |||||  |||||
seq2  TACCACCTGGACCATTCTCTCCCAGCTTCAGTAGGT--AATTTACCATGG  1146

seq1  AAGTGG-TCCCATCTTGGGCAGCACAGACCCAAAGGGTCAA  1185
       ||||| ||||||||  |||||||||||||  |||||||||
seq2  GAGTGGTTCCCATCT--GGCAGCACAGACC--AAGGGTCAA  1183