BAC Information

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BAC

Clone NameB6Ng01-328H23
Chromosome14 (Build37)
Map Location 37,575,133 - 37,682,893
singlet/doubletdoublet
Overlap genenone
Upstream gene4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328H23.bB6Ng01-328H23.g
ACCGA115745GA115746
length1,130471
definitionB6Ng01-328H23.b B6Ng01-328H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,681,763 - 37,682,893)(37,575,133 - 37,575,610)
sequence
gaattccatgttattacaggcagtgtttggtggtcctcttccctgctgtc
tttgccagcctttgtcacggggcttttctagtgtatccaggtcagtggct
gcgaatcaatgcctagtagtgcttttgtatttgccttttcctaagaccta
atgggttatttttctgtgttgtcactagctattcatttatgggtgtttgg
tggcaggtctagcgacatctttgtgctttttcttatgggcattctttgta
ttgccgaagtgtgaagttgcactctgtgttctagatacaagctgcttaat
ggatatgggtttgggaagttattttctctcagatggttgcttatcttcac
atcttagggagcacagcacagatgtttacatcttgataaagccaaatgta
acattctttaaatttacttcattgttcttttggtgtcaaacccgaatcct
tgccaaacgcaagatctcaaagataatcttctgggacatcttgcagcagt
tatgctactgaattcctgcaccgacccccgtggtgcgaaacccagctggt
tttggtaccaagtatgcagcaaaggcttgcattcatctgcgtgggacatc
agtttccagttctcaaaagcactagtgttgtcacctttcctgagaatcaa
ctgagtgtaaagagaagaatttgttttctacagagagacatccgccctaa
ggttctctgtgggttcttgtgcccgtgtgcactgttcataacagtaagtc
gttatgaaagaaggaagtactccctcgtcagtcagtactatttaggccgt
tcaccgttacagttctgtgtaaatttagggatcattggtcaagttcttca
aaagcacacgatctcagtggggagagcagaggtcttctggtgttgggttg
accatcaccttaaccgtctgcctctccctgtctacaaacacgcgccgctc
cttcagttatttctgtctcataattgtcaggataccttatgtttatttcc
cagtacattatcctttttatgccattgcacgtgaagttttatgctgtttt
cttttcttgtagattttgtcagcccttgtataaagagaggccaattgaat
gtggtatatggaatctcgactggggtgtgc

tctactggacctcctcttgtaatatctgactttactattgaaagcccaag
cttcctgcagggtctgcctgaaacttcacattggctcctctgcttccctc
gtggaatataaactcagttcctccaacagggcatctgcaaggcagataag
gaaatgagggaagaccacgaccacaacagcctaagatgagtgttctgagc
actcttactgctgcacaccagtatatcacccctgccctggaggccgaagg
tctcctcttattctcatgccaatagagagtccaaaattacaaaccacatc
ctggcacacacatagagagagagacagggggagggagagggggagagaga
atatatgtatatagtgctccatgtctttttcctgcatgttttggctttcc
ctttaaagaaaatatgaagtctgtgtaaactaagtaatggaaagaatagg
gacccagccaagaagaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37681763_37682893
seq2: B6Ng01-328H23.b_48_1177 (reverse)

seq1  GCACAACCCCAGTCCGAGA-TCCATATACAACAATCAATT-GCCTCTCTT  48
      |||| |||||||| ||||| ||||||||| ||| |||||| |||||||||
seq2  GCAC-ACCCCAGT-CGAGATTCCATATACCACATTCAATTGGCCTCTCTT  48

seq1  TATACAAGGGCTGAACAAAATCTACAAG-AAAGAAAACAGCAATAAAACT  97
      ||||||||||||| |||||||||||||| |||||||||||| ||||||||
seq2  TATACAAGGGCTG-ACAAAATCTACAAGAAAAGAAAACAGC-ATAAAACT  96

seq1  TCACGTGCAATGGCATAAAAAGGATAATGTACTGGGAAATAAACATAAGG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTGCAATGGCATAAAAAGGATAATGTACTGGGAAATAAACATAAGG  146

seq1  TATCCTGACAATTATGAGACAGAAATAACTGAAGGAGCGGCGCGTGTTTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGACAATTATGAGACAGAAATAACTGAAGGAGCGGCGCGTGTTTG  196

seq1  TAGACAGGGAGAGGCAGACGGTTAAGGTGATGGTCAACCCAACACCAGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGGAGAGGCAGACGGTTAAGGTGATGGTCAACCCAACACCAGAA  246

seq1  GACCTCTGCTCTCCCCACTGAGATCGTGTGCTTTTGAAGAACTTGACCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGCTCTCCCCACTGAGATCGTGTGCTTTTGAAGAACTTGACCAA  296

seq1  TGATCCCTAAATTTACACAGAACTGTAACGGTGAACGGCCTAAATAGTAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTAAATTTACACAGAACTGTAACGGTGAACGGCCTAAATAGTAC  346

seq1  TGACTGACGAGGGAGTACTTCCTTCTTTCATAACGACTTACTGTTATGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGACGAGGGAGTACTTCCTTCTTTCATAACGACTTACTGTTATGAA  396

seq1  CAGTGCACACGGGCACAAGAACCCACAGAGAACCTTAGGGCGGATGTCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACACGGGCACAAGAACCCACAGAGAACCTTAGGGCGGATGTCTC  446

seq1  TCTGTAGAAAACAAATTCTTCTCTTTACACTCAGTTGATTCTCAGGAAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGAAAACAAATTCTTCTCTTTACACTCAGTTGATTCTCAGGAAAG  496

seq1  GTGACAACACTAGTGCTTTTGAGAACTGGAAACTGATGTCCCACGCAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAACACTAGTGCTTTTGAGAACTGGAAACTGATGTCCCACGCAGAT  546

seq1  GAATGCAAGCCTTTGCTGCATACTTGGTACCAAAACCAGCTGGGTTTCGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAGCCTTTGCTGCATACTTGGTACCAAAACCAGCTGGGTTTCGC  596

seq1  ACCACGGGGGTCGGTGCAGGAATTCAGTAGCATAACTGCTGCAAGATGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGGGGTCGGTGCAGGAATTCAGTAGCATAACTGCTGCAAGATGTC  646

seq1  CCAGAAGATTATCTTTGAGATCTTGCGTTTGGCAAGGATTCGGGTTTGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATTATCTTTGAGATCTTGCGTTTGGCAAGGATTCGGGTTTGAC  696

seq1  ACCAAAAGAACAATGAAGTAAATTTAAAGAATGTTACATTTGGCTTTATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGAACAATGAAGTAAATTTAAAGAATGTTACATTTGGCTTTATC  746

seq1  AAGATGTAAACATCTGTGCTGTGCTCCCTAAGATGTGAAGATAAGCAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTAAACATCTGTGCTGTGCTCCCTAAGATGTGAAGATAAGCAACC  796

seq1  ATCTGAGAGAAAATAACTTCCCAAACCCATATCCATTAAGCAGCTTGTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAGAAAATAACTTCCCAAACCCATATCCATTAAGCAGCTTGTAT  846

seq1  CTAGAACACAGAGTGCAACTTCACACTTCGGCAATACAAAGAATGCCCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACACAGAGTGCAACTTCACACTTCGGCAATACAAAGAATGCCCAT  896

seq1  AAGAAAAAGCACAAAGATGTCGCTAGACCTGCCACCAAACACCCATAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGCACAAAGATGTCGCTAGACCTGCCACCAAACACCCATAAAT  946

seq1  GAATAGCTAGTGACAACACAGAAAAATAACCCATTAGGTCTTAGGAAAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTAGTGACAACACAGAAAAATAACCCATTAGGTCTTAGGAAAAG  996

seq1  GCAAATACAAAAGCACTACTAGGCATTGATTCGCAGCCACTGACCTGGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACAAAAGCACTACTAGGCATTGATTCGCAGCCACTGACCTGGAT  1046

seq1  ACACTAGAAAAGCCCCGTGACAAAGGCTGGCAAAGACAGCAGGGAAGAGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGAAAAGCCCCGTGACAAAGGCTGGCAAAGACAGCAGGGAAGAGG  1096

seq1  ACCACCAAACACTGCCTGTAATAACATGGAATTC  1131
      ||||||||||||||||||||||||||||||||||
seq2  ACCACCAAACACTGCCTGTAATAACATGGAATTC  1130


seq1: chr14_37575133_37575610
seq2: B6Ng01-328H23.g_62_538

seq1  GAATTCTCTACTGGACCTCCTCTTGTAATATCTGACTTTACTATTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTGGACCTCCTCTTGTAATATCTGACTTTACTATTGAAAG  50

seq1  CCCAAGCTTCCTGCAGGGTCTGCCTGAAACTTCACATTGGCTCCTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCTTCCTGCAGGGTCTGCCTGAAACTTCACATTGGCTCCTCTGCT  100

seq1  TCCCTCGTGGAATATAAACTCAGTTCCTCCAACAGGGCATCTGCAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCGTGGAATATAAACTCAGTTCCTCCAACAGGGCATCTGCAAGGCA  150

seq1  GATAAGGAAATGAGGGAAGACCACGACCACAACAGCCTAAGATGAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGAAATGAGGGAAGACCACGACCACAACAGCCTAAGATGAGTGTT  200

seq1  CTGAGCACTCTTACTGCTGCACACCAGTATATCACCCCTGCCCTGGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACTCTTACTGCTGCACACCAGTATATCACCCCTGCCCTGGAGGC  250

seq1  CGAAGGTCTCCTCTTATTCTCATGCCAATAGAGAGTCCAAAATTACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTCTCCTCTTATTCTCATGCCAATAGAGAGTCCAAAATTACAAAC  300

seq1  CACATCCTGGCACACACATAGAGAGAGAGACAGGGGGAGGGAGAGGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTGGCACACACATAGAGAGAGAGACAGGGGGAGGGAGAGGGGGA  350

seq1  GAGAGAATATATGTATATAGTGCTCAATGTCTTTTTAACTGCATGTTTTG  400
      ||||||||||||||||||||||||| ||||||||||  ||||||||||||
seq2  GAGAGAATATATGTATATAGTGCTCCATGTCTTTTT-CCTGCATGTTTTG  399

seq1  GCTTTCCCTTTAAAGAAAATATGAAGTCTGTGTAAACTAAGTAATGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCCTTTAAAGAAAATATGAAGTCTGTGTAAACTAAGTAATGGAAA  449

seq1  GAATAGGGACCCAGCCAAGAAGAATATG  478
      ||||||||||||||||||||||||||||
seq2  GAATAGGGACCCAGCCAAGAAGAATATG  477


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