BAC Information

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BAC

Clone NameB6Ng01-329O02
Chromosome14 (Build37)
Map Location 20,388,055 - 20,389,209
singlet/doubletsinglet
Overlap geneLOC100039441
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983
Downstream geneEG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329O02.bB6Ng01-329O02.g
ACCGA116721GA116722
length1,1561,093
definitionB6Ng01-329O02.b B6Ng01-329O02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagaggacacaactagtatttacaggagaaaggctttatcata
tctcctccaggagattcctgtgtgacaacaaggaaacaccaggagcaaac
ttccctggtgatcactttggacctctatggactcaacaccaacaggacct
gcaaactgtgcatcacacaaatcctcagaccccatcaaaggtcccagagc
cccagtcctgaacaaaacacacgcaactatgttcacacacacagacacaa
ttagaatgccaaataaatccagacaggtgccatctctcagaatataatga
acaatatcagagtaaagccttgaagcctgcaggcattgcattcacacact
gagagacagtaagtgtgagcaggacattctagctgttcacagcaacaatc
agaatgcaaaaaccccaaggtcaagtacaaaagaagatgataataaacac
acagcaccttgtttatccaacaattaaacacctgtcagggctacttaatt
gaatgatgggagatgacgcactccattcatggaaggaaattgggttaaca
gatggcacaatacagtcaacagggtactgggcataattcctacctgtagt
tcaaatcctcatacatgtaaaggttcaggattccacacatttcctccatg
tcattgctgatcttcctcatatccaatttcagttcttctagttcatttat
ttttgatctcttcttagtcattttggaattttgggttgaagtatttctag
cagaccctgcagataggtaaacacaaaagaatttgcatacttgatggccc
aggggcaggggagaccattctgagtcccaagaagaagatggagggagaga
aaagataaagacagtgaattcctaaaagagcagaaaagctatcttccagc
tggtttgctaagctatgttcctcttcctaaccaccattgtcagacatatg
ccacactccctgttacaggcccggttgccttgaaatgtataagctgcctc
agacataaagaatatggggaacattgtcaagtcaatatcagatgggacgc
aaggaaaatctgaagttcatagttgctagcactatccagcactaataaat
cggtgtgtcctccaatcaagtgttctgaatctaccacatgacattgacaa
ggggag
gaattcctatcttgtcagccctgatgggtttccagggccttatctttgtg
ttgctttcattccctctggctctgaaattcttcccaccttctcttctgca
gagttcctgcgccctggagcggggaggggtttgatagagccatcccattt
aggcctgaggtttagagggtcttactctatgcacacttgtctggcagtgg
gtatctgtattcacttccatccactgcagaggaagcgtctcttataatgg
ctgagcaaggcattgatctatgagtgtggcagagtgtttttaggagtcat
tttatggctaaatttctttagaatttggttttaccctagatccctggcct
atcttgtttcaggtttttggtcactcacaaagtgtcagggatagattcta
tctcttgaggctgtccttcagtcaaatcagacattggttagtcacaccca
cagctgtgtgccaccattgccctagtacatcttgcaggtaggtaggtagt
cattgtagaccaaaggttttgtgatggtttgtatatgcttggtccaggga
gtggcactattagaaggtgtggccctgttggagtaggtatggccttattg
gagtaggtgtggcattgtgggtgggggctttaagaccctcatcctagctg
cctggaagtcagtattctgctagtagtcttcagaggaaaatgtagaactc
tcagttcctcttgcaccatgcctgcctgccacggaccaggcccattcacc
ccccccccccccccaatccgtgggaatcagggtttcagacagatgggcaa
agagtcagtgagaattgacagacagacagacacagacacgagagagtggt
gctgaatctgaatgtattgtcatagagcgaacaccagtctatataataca
gaaaaggaaagaaagaaaggggtaggctgtcacagcaggcaaagtacttt
gaaataatctgacacaaacagaggaatgaacttcaaggactataggagtc
agcttaatattaacagtaaagaataaaacagcctgcttaggggtcagcta
tggccagttatgaattcccacaccctaggttacaattgtggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20388055_20389209
seq2: B6Ng01-329O02.b_46_1201

seq1  GAATTCCCAGAGGACACAACTAGTATTTACAGGAGAAAGGCTTTATCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGGACACAACTAGTATTTACAGGAGAAAGGCTTTATCATA  50

seq1  TCTCCTCCAGGAGATTCCTGTGTGACAACAAGGAAACACCAGGAGCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCAGGAGATTCCTGTGTGACAACAAGGAAACACCAGGAGCAAAC  100

seq1  TTCCCTGGTGATCACTTTGGACCTCTATGGACTCAACACCAACAGGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGTGATCACTTTGGACCTCTATGGACTCAACACCAACAGGACCT  150

seq1  GCAAACTGTGCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTGTGCATCACACAAATCCTCAGACCCCATCAAAGGTCCCAGAGC  200

seq1  CCCAGTCCTGAACAAAACACACGCAACTATGTTCACACACACAGACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCTGAACAAAACACACGCAACTATGTTCACACACACAGACACAA  250

seq1  TTAGAATGCCAAATAAATCCAGACAGGTGCCATCTCTCAGAATATAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGCCAAATAAATCCAGACAGGTGCCATCTCTCAGAATATAATGA  300

seq1  ACAATATCAGAGTAAAGCCTTGAAGCCTGCAGGCATTGCATTCACACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCAGAGTAAAGCCTTGAAGCCTGCAGGCATTGCATTCACACACT  350

seq1  GAGAGACAGTAAGTGTGAGCAGGACATTCTAGCTGTTCACAGCAACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGTAAGTGTGAGCAGGACATTCTAGCTGTTCACAGCAACAATC  400

seq1  AGAATGCAAAAACCCCAAGGTCAAGTACAAAAGAAGATGATAATAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCAAAAACCCCAAGGTCAAGTACAAAAGAAGATGATAATAAACAC  450

seq1  ACAGCACCTTGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACCTTGTTTATCCAACAATTAAACACCTGTCAGGGCTACTTAATT  500

seq1  GAATGATGGGAGATGACGCACTCCATTCATGGAAGGAAATTGGGTTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGGGAGATGACGCACTCCATTCATGGAAGGAAATTGGGTTAACA  550

seq1  GATGGCACAATACAGTCAACAGGGTACTGGGCATAATTCCTACCTGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCACAATACAGTCAACAGGGTACTGGGCATAATTCCTACCTGTAGT  600

seq1  TCAAATCCTCATACATGTAAAGGTTCAGGATTCCACACATTTCCTCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCTCATACATGTAAAGGTTCAGGATTCCACACATTTCCTCCATG  650

seq1  TCATTGCTGATCTTCCTCATATCCAATTTCAGTTCTTCTAGTTCATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTGATCTTCCTCATATCCAATTTCAGTTCTTCTAGTTCATTTAT  700

seq1  TTTTGATCTCTTCTTAGTCATTTTGGAATTTTGGGTTGAAGTATTTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCTCTTCTTAGTCATTTTGGAATTTTGGGTTGAAGTATTTCTAG  750

seq1  CAGACCCTGCAGATAGGTAAACACAAAAGAATTTGCATACTTGATGGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTGCAGATAGGTAAACACAAAAGAATTTGCATACTTGATGGCCC  800

seq1  AGGGGCAGGGGAGACCATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGGGGAGACCATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGA  850

seq1  AAAGATAAAGACAGTGAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAGACAGTGAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGC  900

seq1  TGGTTTGCTAAGCTATGTTCCTCTTCCTAACCACCATTGTCAGACATATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGCTAAGCTATGTTCCTCTTCCTAACCACCATTGTCAGACATATG  950

seq1  CCACACTCCCTGTTACAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCCCTGTTACAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTC  1000

seq1  AGACATAAAG-ATATGGGGAACATTGTCAGGTC-ATATCAGATGGGACGC  1048
      |||||||||| |||||||||||||||||| ||| ||||||||||||||||
seq2  AGACATAAAGAATATGGGGAACATTGTCAAGTCAATATCAGATGGGACGC  1050

seq1  AGGGAAATCCTGAAGTTCATAGTGCTTAGCACTATCAAGCACTAATTAAT  1098
      | |||||  ||||||||||||||   |||||||||| ||||||||| |||
seq2  AAGGAAAATCTGAAGTTCATAGTTGCTAGCACTATCCAGCACTAATAAAT  1100

seq1  C-GTGTGTCTTCAAATCCAAAGTG-TCTGAGTCCTCACCACATGACA-TG  1145
      | ||||||| || ||||  ||||| ||||| ||   ||||||||||| ||
seq2  CGGTGTGTCCTCCAATC--AAGTGTTCTGAATC--TACCACATGACATTG  1146

seq1  ACCAGGGGAG  1155
      || |||||||
seq2  ACAAGGGGAG  1156