BAC Information

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BAC

Clone NameB6Ng01-330D11
Chromosome14 (Build37)
Map Location 113,791,601 - 113,792,786
singlet/doubletsinglet
Overlap genenone
Upstream geneEG223186, LOC100043509, Tpm3-rs7
Downstream geneLOC100043510, LOC382947, LOC668791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330D11.bB6Ng01-330D11.g
ACCGA116958GA116959
length1,177650
definitionB6Ng01-330D11.b B6Ng01-330D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatcactctggggactgttgaagaaggcatggctcttctcctt
gtatatgtgaaaattaaaatgatctatgtgatgaaattgtctgattaagt
gggtctgaagaataaaaaacaattcatagacattgaaacagaacaaaggc
aagctaaaacatatttctgtgaactcatgtgaaacctaaactttgaaaag
taacatcaattgctaaagaaaatatttttaaatggatatatgtcaaataa
ataggttttatgagattttgtttgtgacttgtttgcagaacaatctgata
gtttattttgtaattacagtgatatgccatgtgctactgacacatttatc
aatcctctatcatctatcaacacatttataagtcatctaccccctaccta
tcatgtatctacgcatactttaccataatcattcacttaactatcacatg
atacctctctgtcatccatttctatctatctatcttgtagttattatcta
cctatctcttgtccgatataaataccatgttaggtataacttcatagtta
tttgaaatttttattccctgttctgtctatctttcatgagtcattcatac
tgaagtcaaaacaaactttatacacctttttctgtgtacttcttcttttc
ttttaatgctttaaaaactattttgaatggcaaatatgaccttggcagtt
tagtttaatccttttcatttttgctgttttaattatgcaaatgtgtaata
tgtcactgtttgaggatgcacctgtgagcatgggtttcctgagtattcaa
tgagagagagctatctaatttcaaatgctactgttccactgtaaatatct
gacttctttaaggacatcccttcataaatttgtactttctacaaaagttg
gagtgagcttttgcccttaattcttcttcaagtcatcccagtaaacacaa
agacatttttagtctacatataaaccatgtgaatttttttagattatatc
cactacagtcttatatcattgactgttctttgaattcattgagtagaatt
agacttgcattaaacagcatctcagaaaagaacgtatcatcacatttact
catttaacactttttgcatatcagtaatataaaaatattcacactatttg
taataaattccaatcttttatactcat

gaattcatgaaattcttaggcaaatggatggatctggaggatatcaacct
gagttaggtaacccaatcacaaaagaacacacatggtatgccctcactga
taagcggatattagtccagaaacttagaatatctgagatgcaatttgcaa
aacacatgaaactcacaaaggaagaccaaagtgtgaatactttgctcctt
cttagaatggggaacaaaatacccatggaaggagttacagagacaaagtt
tggagctaagatggaaggaaaaaccatctagagactgttccaccctggca
tccatcccatatacaactaccaaacccagacactattgcatatgccagaa
agattttgctgacaggaccctgatatagctctctcttgtgagtctatgcc
aatgaccagcaagtacagaagtggatgctcacagtcatttattgaataga
acacagggcctctaatgaagaagctggagaaagtagttaaggagctaaag
ggatctgcaaccctatagaaggaatgatatgaactaaccagtatccccta
gagctgtgtctctagtttgcatatgtagcagaggatggcctagtcggcca
tcaatgggaggagaggcccttggtctttgtgaagatcatatgccccagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113791601_113792786
seq2: B6Ng01-330D11.b_50_1226 (reverse)

seq1  ATGAGTATAAAAGATGTGATATTATTTACAAATAGTGTG-ATATTTTTAA  49
      ||||||||||||||| ||  |||  |||||||||||||| ||||||||| 
seq2  ATGAGTATAAAAGAT-TGGAATTTATTACAAATAGTGTGAATATTTTTA-  48

seq1  TTATTACTGAATTATGC-AAAAGTGTTAAATGAGTAAATGTGATGATTAC  98
       |||||||||  ||||| |||||||||||||||||||||||||||| |||
seq2  -TATTACTGA--TATGCAAAAAGTGTTAAATGAGTAAATGTGATGA-TAC  94

seq1  GTTCTTTTCTGAGATGCTGTTTAATGCAGGTCCTAATTCTACTTCAATGA  148
      |||||||||||||||||||||||||||| || |||||||||| |||||||
seq2  GTTCTTTTCTGAGATGCTGTTTAATGCAAGT-CTAATTCTAC-TCAATGA  142

seq1  ATTCAAAG-ACAGTCAATGAATATAAGACTGTAGTGGATATAATCTTAAA  197
      |||||||| |||||||||| ||||||||||||||||||||||||| ||||
seq2  ATTCAAAGAACAGTCAATG-ATATAAGACTGTAGTGGATATAATC-TAAA  190

seq1  AAAATTCACATGGTTTATATGTAGACTAAAAATGTCTTTGTTGTTTTACT  247
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  AAAATTCACATGGTTTATATGTAGACTAAAAATGTCTTTGT--GTTTACT  238

seq1  GGGATGACTTGAAGAAGAATTAAGGGCAAAAGCTCACTCCAACTTTTGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGACTTGAAGAAGAATTAAGGGCAAAAGCTCACTCCAACTTTTGTA  288

seq1  GAAAGTACAAATTTATGAAGGGATGTCCTTAAAGAAGTCAGATATTTACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTACAAATTTATGAAGGGATGTCCTTAAAGAAGTCAGATATTTACA  338

seq1  GTGGAACAGTAGCATTTGAAATTAGATAGCTCTCTCTCATTGAATACTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAGTAGCATTTGAAATTAGATAGCTCTCTCTCATTGAATACTCA  388

seq1  GGAAACCCATGCTCACAGGTGCATCCTCAAACAGTGACATATTACACATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCCATGCTCACAGGTGCATCCTCAAACAGTGACATATTACACATT  438

seq1  TGCATAATTAAAACAGCAAAAATGAAAAGGATTAAACTAAACTGCCAAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATTAAAACAGCAAAAATGAAAAGGATTAAACTAAACTGCCAAGG  488

seq1  TCATATTTGCCATTCAAAATAGTTTTTAAAGCATTAAAAGAAAAGAAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTGCCATTCAAAATAGTTTTTAAAGCATTAAAAGAAAAGAAGAA  538

seq1  GTACACAGAAAAAGGTGTATAAAGTTTGTTTTGACTTCAGTATGAATGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGAAAAAGGTGTATAAAGTTTGTTTTGACTTCAGTATGAATGAC  588

seq1  TCATGAAAGATAGACAGAACAGGGAATAAAAATTTCAAATAACTATGAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAGATAGACAGAACAGGGAATAAAAATTTCAAATAACTATGAAG  638

seq1  TTATACCTAACATGGTATTTATATCGGACAAGAGATAGGTAGATAATAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTAACATGGTATTTATATCGGACAAGAGATAGGTAGATAATAAC  688

seq1  TACAAGATAGATAGATAGAAATGGATGACAGAGAGGTATCATGTGATAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGATAGATAGATAGAAATGGATGACAGAGAGGTATCATGTGATAGT  738

seq1  TAAGTGAATGATTATGGTAAAGTATGCGTAGATACATGATAGGTAGGGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAATGATTATGGTAAAGTATGCGTAGATACATGATAGGTAGGGGG  788

seq1  TAGATGACTTATAAATGTGTTGATAGATGATAGAGGATTGATAAATGTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACTTATAAATGTGTTGATAGATGATAGAGGATTGATAAATGTGT  838

seq1  CAGTAGCACATGGCATATCACTGTAATTACAAAATAAACTATCAGATTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCACATGGCATATCACTGTAATTACAAAATAAACTATCAGATTGT  888

seq1  TCTGCAAACAAGTCACAAACAAAATCTCATAAAACCTATTTATTTGACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAACAAGTCACAAACAAAATCTCATAAAACCTATTTATTTGACAT  938

seq1  ATATCCATTTAAAAATATTTTCTTTAGCAATTGATGTTACTTTTCAAAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATTTAAAAATATTTTCTTTAGCAATTGATGTTACTTTTCAAAGT  988

seq1  TTAGGTTTCACATGAGTTCACAGAAATATGTTTTAGCTTGCCTTTGTTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTCACATGAGTTCACAGAAATATGTTTTAGCTTGCCTTTGTTCT  1038

seq1  GTTTCAATGTCTATGAATTGTTTTTTATTCTTCAGACCCACTTAATCAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAATGTCTATGAATTGTTTTTTATTCTTCAGACCCACTTAATCAGA  1088

seq1  CAATTTCATCACATAGATCATTTTAATTTTCACATATACAAGGAGAAGAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCATCACATAGATCATTTTAATTTTCACATATACAAGGAGAAGAG  1138

seq1  CCATGCCTTCTTCAACAGTCCCCAGAGTGATCTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTTCTTCAACAGTCCCCAGAGTGATCTGAATTC  1177


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