BAC Information

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BAC

Clone NameB6Ng01-332B22
Chromosome14 (Build37)4 (Build37)
Map Location 33,761,675 - 33,762,33426,474,363 - 26,475,515
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658
Downstream geneLrrc18, EG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332B22.bB6Ng01-332B22.g
ACCGA118314GA118315
length1,0111,148
definitionB6Ng01-332B22.b B6Ng01-332B22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(33,761,675 - 33,762,334)(26,474,363 - 26,475,515)
sequence
gaattcctttcatgctgtatactttatctttactcttttgattcattttc
tatgcatttttaaaatttgagataatcacatttgacaattattactctga
aaaatctttgcctctacctacatcttaaattattttacttatgttttctg
atagtatgtccaaaatttcacatcttacattaagatctttgattttactt
gatttttctaaaaggtaaacattgaaatctagtttcaattatctataggt
ggatgcccaattactcatccctattttgaaagatggagttcttcatttat
gaataattatcaagataattgaccaggccatcttctgatacatatgcagc
tagaaacatgagctcgggggagggcctggttcagctctcttctgtttctc
tgttgtctcaagttgccttcaaggcctcgctgaatcctcactgcctccta
gtgtgatgttgagccaggctgtgcgatcgtctcaataaccgttatttgtg
tagctctcagactggcttcctgaaacatggatctcagcctgcagcatgga
cagaccacagaaagacaaatgtccaatgggactctatactcttcctttgc
tttccagcctgccgctctgggtcccctgcagtactaaccatactagggtg
cacacttctttattttccttatcctcaaacttttgttcaccatggggaat
atatatgtgtatatatgatacaaatttttctattttaataattttcatgg
gtacaattccatggcaccaggggtattcatactgatgtagaaacatcatc
agcaccattgctagcaaggttttattttcccaaagtaaaacagtaatccc
cctgcttccggcccacagattggaaaatcactattgttctttctgtcttt
ataaacgtgactactgaatgactcattaagtggctactagttatatatag
agtgtgctttgtgctagctattcactggtataccgtattcaggctatcac
gttatagcata
gaattcaacatcttccctatatacaagggacaaatatactgaaaaaaaat
caggaagatattaccttttacaagagtctaaaatataccttgtgataact
gtaaaactctaagactttaaggtgaaaacttaaagaagacatcagaaggt
gaaaagatcacccatgattacggaaaaacaggataaatattgcaaaatgg
tcattctacccaaaacaatttatggattctttgcaatcctcaccataatt
ctaacacacttcttacagaatttggaaaaacagttttatatttcatatat
gtgtttcaattaaaataaccgcagaggttgggtagctggtaagggaccag
gacatggactattttcaaaggtagaggaaattaaatatggtgttataata
ctattgaagaggaaagtagacttgaacgattaatttgggagtatgattaa
agggcaggataaaggaggatatatgtgaaagagaaaagaacacaaaagtc
cttttgaaaagacaaatgaaaaccctgaatgctagtcggtaggattgaga
ggtagtttgcatggtaccagaatatagcagttcccaactgcacactcaaa
ttgtcctggaggcagcagtgactggtggctgctgctgtgcacatcgcatg
ttctttgctacatgccccagtgttcttgcttcctgaatgaaagacacaca
cacacacacacacacacacacacacagagccatttattttaatatgcctt
aaacagctcaatggttggggcactcccaaacctccatgcggataacacac
tcccctccaatatttctgagttactaaactctatattcatattccacttt
tgtcatgctagatgcagtggcagtgggggtgcttttatgtgttggctgtt
tctctgtcctacacttctcaagcctggttttcattcctttcctggcatgc
atttttctccaaagtttcttttaactcattctcaaaattaagtgattatc
actgtcaaggattaatttagctcttacttctactttttgttttgtttaca
gatctgtctgtacgatcacactatgttctatatgccattgtaatataatt
ggacatactgcatgaatgctgtctgcctgaatgcctttagccttacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33761675_33762334
seq2: B6Ng01-332B22.b_415_1052

seq1  GCCTGGTTCAGCTCTCTTCTGTTTCTCTGTTGTCTCAAGTTGCCTTCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTTCAGCTCTCTTCTGTTTCTCTGTTGTCTCAAGTTGCCTTCAAG  50

seq1  GCCTCGCTGAATCCTCACTGCCTCCTAGTGTGATGTTGAGCCAGGCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGCTGAATCCTCACTGCCTCCTAGTGTGATGTTGAGCCAGGCTGTG  100

seq1  CGATCGTCTCAATAACCGTTATTTGTGTAGCTCTCAGACTGGCTTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCGTCTCAATAACCGTTATTTGTGTAGCTCTCAGACTGGCTTCCTGA  150

seq1  AACATGGATCTCAGCCTGCAGCATGGACAGACCACAGAAAGACAAATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGATCTCAGCCTGCAGCATGGACAGACCACAGAAAGACAAATGTC  200

seq1  CAATGGGACTCTATACTCTTCCTTTGCTTTCCAGCCTGCCGCTCTGGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGACTCTATACTCTTCCTTTGCTTTCCAGCCTGCCGCTCTGGGTC  250

seq1  CCCTGCAGTACTAACCATACTAGGGTGCACACTTCTTTATTTTCCTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTACTAACCATACTAGGGTGCACACTTCTTTATTTTCCTTATC  300

seq1  CTCAAACTTTTGTTCACCATGGGGAATATATATGTGTATATATGATACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTTTTGTTCACCATGGGGAATATATATGTGTATATATGATACAA  350

seq1  ATTTTTCTATTTTAATAATTTTCATGGGTACAATTCCATGGCACCAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTATTTTAATAATTTTCATGGGTACAATTCCATGGCACCAGGGG  400

seq1  TATTCATACTGATGTAGAAACATCATCAGCACCATTGCTAGCAAGGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATACTGATGTAGAAACATCATCAGCACCATTGCTAGCAAGGTTTT  450

seq1  ATTTTCCCAAAGTAAAACAGTAATCCCCCTGCTTTCCGGCCCCACAGATT  500
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  ATTTTCCCAAAGTAAAACAGTAATCCCCCTGC-TTCCGG-CCCACAGATT  498

seq1  GGGAAAATCACTATTGTTCTTTCTGTCTTTATAAACGTGACTACTTGAAT  550
       ||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  -GGAAAATCACTATTGTTCTTTCTGTCTTTATAAACGTGACTAC-TGAAT  546

seq1  GACTCATTTAAGTGGGCTTACATAGTTTATTATATAGTAGGTTGTTGTCT  600
      |||||| ||||||||   ||| |||||   ||||||| ||     |||  
seq2  GACTCA-TTAAGTGG--CTAC-TAGTT--ATATATAG-AG-----TGTGC  584

seq1  TTTGTGTCTAGCTTATTTCAGCTGGTAAACCGTATTCAGGGCTATCAGTG  650
      |||||| ||||||   |||| |||||| |||||||||| ||||||||  |
seq2  TTTGTG-CTAGCT--ATTCA-CTGGTATACCGTATTCA-GGCTATCA-CG  628

seq1  TTATAGCATA  660
      ||||||||||
seq2  TTATAGCATA  638

seq1: chr4_26474363_26475515
seq2: B6Ng01-332B22.g_67_1214

seq1  GAATTCAACATCTTCCCTATATACAAGGGACAAATATACTGAAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCTTCCCTATATACAAGGGACAAATATACTGAAAAAAAAT  50

seq1  CAGGAAGATATTACCTTTTACAAGAGTCTAAAATATACCTTGTGATAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATATTACCTTTTACAAGAGTCTAAAATATACCTTGTGATAACT  100

seq1  GTAAAACTCTAAGACTTTAAGGTGAAAACTTAAAGAAGACATCAGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTCTAAGACTTTAAGGTGAAAACTTAAAGAAGACATCAGAAGGT  150

seq1  GAAAAGATCACCCATGATTACGGAAAAACAGGATAAATATTGCAAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATCACCCATGATTACGGAAAAACAGGATAAATATTGCAAAATGG  200

seq1  TCATTCTACCCAAAACAATTTATGGATTCTTTGCAATCCTCACCATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTACCCAAAACAATTTATGGATTCTTTGCAATCCTCACCATAATT  250

seq1  CTAACACACTTCTTACAGAATTTGGAAAAACAGTTTTATATTTCATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACACTTCTTACAGAATTTGGAAAAACAGTTTTATATTTCATATAT  300

seq1  GTGTTTCAATTAAAATAACCGCAGAGGTTGGGTAGCTGGTAAGGGACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCAATTAAAATAACCGCAGAGGTTGGGTAGCTGGTAAGGGACCAG  350

seq1  GACATGGACTATTTTCAAAGGTAGAGGAAATTAAATATGGTGTTATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGACTATTTTCAAAGGTAGAGGAAATTAAATATGGTGTTATAATA  400

seq1  CTATTGAAGAGGAAAGTAGACTTGAACGATTAATTTGGGAGTATGATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAAGAGGAAAGTAGACTTGAACGATTAATTTGGGAGTATGATTAA  450

seq1  AGGGCAGGATAAAGGAGGATATATGTGAAAGAGAAAAGAACACAAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGATAAAGGAGGATATATGTGAAAGAGAAAAGAACACAAAAGTC  500

seq1  CTTTTGAAAAGACAAATGAAAACCCTGAATGCTAGTCGGTAGGATTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAAAAGACAAATGAAAACCCTGAATGCTAGTCGGTAGGATTGAGA  550

seq1  GGTAGTTTGCATGGTACCAGAATATAGCAGTTCCCAACTGCACACTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTGCATGGTACCAGAATATAGCAGTTCCCAACTGCACACTCAAA  600

seq1  TTGTCCTGGAGGCAGCAGTGACTGGTGGCTGCTGCTGTGCACATCGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGGAGGCAGCAGTGACTGGTGGCTGCTGCTGTGCACATCGCATG  650

seq1  TTCTTTGCTACATGCCCCAGTGTTCTTGCTTCCTGAATGAAAGACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCTACATGCCCCAGTGTTCTTGCTTCCTGAATGAAAGACACACA  700

seq1  CACACACACACACACACACACACACAGAGCCATTTATTTTAATATGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAGAGCCATTTATTTTAATATGCCTT  750

seq1  AAACAGCTCAATGGTTGGGGCACTCCCAAACCTCCATGCGGATAACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTCAATGGTTGGGGCACTCCCAAACCTCCATGCGGATAACACAC  800

seq1  TCCCCTCCAATATTTCTGAGTTACTAAACTCTATATTCATATTCCACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCAATATTTCTGAGTTACTAAACTCTATATTCATATTCCACTTT  850

seq1  TGTCATGCTAGATGCAGTGGCAGTGGGGGTGCTTTTATGTGTTGGCTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCTAGATGCAGTGGCAGTGGGGGTGCTTTTATGTGTTGGCTGTT  900

seq1  TCTCTGTCCTACACTTCTCAAGCCTGGTTTTCATTCCTTTCCTGGCATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCCTACACTTCTCAAGCCTGGTTTTCATTCCTTTCCTGGCATGC  950

seq1  A-TTTTCTCCAAAG-TTCCTTTAACTCATTCTCAAAAATTAAGTGATTAT  998
      | |||||||||||| ||| |||||||||||||| ||||||||||||||||
seq2  ATTTTTCTCCAAAGTTTCTTTTAACTCATTCTC-AAAATTAAGTGATTAT  999

seq1  CACTGTCAAGGATTAATTTAGGCTCTTACTTCTACTTTTTGTTTTTGTTT  1048
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  CACTGTCAAGGATTAATTTA-GCTCTTACTTCTACTTTTTG-TTTTGTTT  1047

seq1  ACAGATCTGTCTTGTACGGATCCACACTATGTTCTTAATATGCCATTGTA  1098
      ||||||||||| ||||| ||| |||||||||||||  |||||||||||||
seq2  ACAGATCTGTC-TGTAC-GAT-CACACTATGTTCT--ATATGCCATTGTA  1092

seq1  ATATAATTGGACATACTGCCAATG-ATGCTGTCTG-CTGATTG-CTTTAG  1145
      |||||||||||||||||||  ||| |||||||||| |||| || ||||||
seq2  ATATAATTGGACATACTGC--ATGAATGCTGTCTGCCTGAATGCCTTTAG  1140

seq1  CTTTACAA  1153
      | ||||||
seq2  CCTTACAA  1148