BAC Information

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BAC

Clone NameB6Ng01-334H04
Chromosome14 (Build37)
Map Location 15,322,739 - 15,323,782
singlet/doubletsinglet
Overlap geneLOC667152
Upstream geneSynpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1
Downstream geneLOC100042147, Slc4a7, Nek10, Lrrc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334H04.bB6Ng01-334H04.g
ACCGA119949GA119950
length1,1511,045
definitionB6Ng01-334H04.b B6Ng01-334H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tacagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgacgtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataacatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaggattttatcgaaa
agacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagaagaaagtatccaaggagctaaagggatctgcaaccc
tataggtgaacaacattatgaactaaccagtaccccggagctctgactct
agctgcatatgtatccaaagatggcctagtcgaccatccactggaagaga
gccccatggacacgccaaacttttattgcccacaagtacacaggggaaac
c
gaattcagagagtagtagagacaaagaaaggcagagatagggagagtaca
ggaggcctgccttgccacgtggagagagggaggaagagaggtggagcaag
ggggcaagagacaagagaaaggcaagagcataagagagagaagaggggcc
aagcagcccttttatactgggtcaagcctacctggctgctgccaggaact
gtgggggtagagtttagacagaattccaacagagcaagatctttttaact
tgattatacagtgtatatagctcttgagatatattattgggtactgtatt
gatgtttataatttttctacttgtgtaccagttaaaattctttattgaaa
aaaataataatgggcagggcagatacttaccattatgaatctctactttg
ccctttccctggtgcctgggcatgaaagcatgataaagcagaggtcagag
agttgaaggtgcctgaagaagtaagccagggcctgagtcattctcatttg
ctattaaaatactcatttgcctctggcctgttcctttcaactcctctgca
gttgatctcagggtctgtgcctgtgtctctgctctaacatgtattcatga
tacagcagaaatatactaatgataatacagcaaaagaaattggcagcaca
tactccagtttttgtaaattactcagcctgcctcactttgtcctcagtat
gaatccccagtttctcattcatgtttctttcaggtgggactgagtgagca
aacccaacaagtctatctctgtaccaatttcatcactaaattctaacaaa
cttggtcttgagtactgtcctctttctgagcatttgaaggcagtatacag
agcttatttgaccattgactcaaatttagaggcattgtttgaggatgtat
aacgtttgggctaaagatgtatgttacatgttgagtacctgttgaaggag
aaataacacacacactcacacacacctcctcacacccctcacacaactag
atccggagatatagtgtcctcagggtccttgacgatacccaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15322739_15323782
seq2: B6Ng01-334H04.g_66_1110

seq1  GAATTCAGAGAGTAGTAGAGACAAAGAAAGGCAGAGATAGGGAGAGTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGTAGTAGAGACAAAGAAAGGCAGAGATAGGGAGAGTACA  50

seq1  GGAGGCCTGCCTTGCCACGTGGAGAGAGGGAGGAAGAGAGGTGGAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTGCCTTGCCACGTGGAGAGAGGGAGGAAGAGAGGTGGAGCAAG  100

seq1  GGGGCAAGAGACAAGAGAAAGGCAAGAGCATAAGAGAGAGAAGAGGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAGAGACAAGAGAAAGGCAAGAGCATAAGAGAGAGAAGAGGGGCC  150

seq1  AAGCAGCCCTTTTATACTGGGTCAAGCCTACCTGGCTGCTGCCAGGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCCTTTTATACTGGGTCAAGCCTACCTGGCTGCTGCCAGGAACT  200

seq1  GTGGGGGTAGAGTTTAGACAGAATTCCAACAGAGCAAGATCTTTTTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTAGAGTTTAGACAGAATTCCAACAGAGCAAGATCTTTTTAACT  250

seq1  TGATTATACAGTGTATATAGCTCTTGAGATATATTATTGGGTACTGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATACAGTGTATATAGCTCTTGAGATATATTATTGGGTACTGTATT  300

seq1  GATGTTTATAATTTTTCTACTTGTGTACCAGTTAAAATTCTTTATTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTATAATTTTTCTACTTGTGTACCAGTTAAAATTCTTTATTGAAA  350

seq1  AAAATAATAATGGGCAGGGCAGATACTTACCATTATGAATCTCTACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAATGGGCAGGGCAGATACTTACCATTATGAATCTCTACTTTG  400

seq1  CCCTTTCCCTGGTGCCTGGGCATGAAAGCATGATAAAGCAGAGGTCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCCTGGTGCCTGGGCATGAAAGCATGATAAAGCAGAGGTCAGAG  450

seq1  AGTTGAAGGTGCCTGAAGAAGTAAGCCAGGGCCTGAGTCATTCTCATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAGGTGCCTGAAGAAGTAAGCCAGGGCCTGAGTCATTCTCATTTG  500

seq1  CTATTAAAATACTCATTTGCCTCTGGCCTGTTCCTTTCAACTCCTCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAATACTCATTTGCCTCTGGCCTGTTCCTTTCAACTCCTCTGCA  550

seq1  GTTGATCTCAGGGTCTGTGCCTGTGTCTCTGCTCTAACATGTATTCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATCTCAGGGTCTGTGCCTGTGTCTCTGCTCTAACATGTATTCATGA  600

seq1  TACAGCAGAAATATACTAATGATAATACAGCAAAAGAAATTGGCAGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGAAATATACTAATGATAATACAGCAAAAGAAATTGGCAGCACA  650

seq1  TACTCCAGTTTTTGTAAATTACTCAGCCTGCCTCACTTTGTCCTCAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAGTTTTTGTAAATTACTCAGCCTGCCTCACTTTGTCCTCAGTAT  700

seq1  GAATCCCCAGTTTCTCATTCATGTTTCTTTCAGGTGGGACTGAGTGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCCAGTTTCTCATTCATGTTTCTTTCAGGTGGGACTGAGTGAGCA  750

seq1  AACCCAACAAGTCTATCTCTGTACCAATTTCATCACTAAATTCTAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACAAGTCTATCTCTGTACCAATTTCATCACTAAATTCTAACAAA  800

seq1  CTTGGTCTTGAGTACTGTCCTCTTTCTGAGCATTTGAAGGCAGTATACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTTGAGTACTGTCCTCTTTCTGAGCATTTGAAGGCAGTATACAG  850

seq1  AGCTTATTTGACCATTGACTCAAATTAGAAGGCA-TGTTTGAGGATGTAT  899
      ||||||||||||||||||||||||||   ||||| |||||||||||||||
seq2  AGCTTATTTGACCATTGACTCAAATTTAGAGGCATTGTTTGAGGATGTAT  900

seq1  AACGTTTGGGCTAAAGATGTATG-TACATGTTGAGTACCTGTTGAAGGTA  948
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  AACGTTTGGGCTAAAGATGTATGTTACATGTTGAGTACCTGTTGAAGG-A  949

seq1  GAAATAACACACACACACACACACACACACACACA-CACACACACAACTA  997
      |||||||||||||||| |||||||||   | |||| | | ||||||||||
seq2  GAAATAACACACACACTCACACACACCTCCTCACACCCCTCACACAACTA  999

seq1  GAT-CTGAGATATAGTGTCCTCAGTGGTCATTTACAGATACCCTAATC  1044
      ||| | |||||||||||||||||| |||| || || ||||||| ||||
seq2  GATCCGGAGATATAGTGTCCTCAG-GGTCCTTGAC-GATACCCAAATC  1045