BAC Information

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BAC

Clone NameB6Ng01-334I01
Chromosome14 (Build37)
Map Location 16,695,274 - 16,696,346
singlet/doubletsinglet
Overlap genenone
Upstream geneNek10, Lrrc3b
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334I01.bB6Ng01-334I01.g
ACCGA119991GA119992
length1,0371,076
definitionB6Ng01-334I01.b B6Ng01-334I01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaatttgcgattatctatgcatatacaactcaaggtaagaaa
aaatactgttcctttaaaggactgtctttggacatttaagaactcattct
aaattgcctggatcagacctcttaaggcgactccattctagatttatatc
tcaagcagattataagccttacacaagaataattggccatataatttcat
tctttacatcatcaaaatagtaatggcttgagataattatttggtatttt
tagagaatgttcatgtgaaattataaattgtcctcagtttctacctgttc
cacataatggtgttaattcttgaggacttatacttaatcaattattacaa
aaggatactcatatttctgatttaaaaaaataaaatatgcacaggtgact
gttgataccttttcaggctttctaattgcaactcctctaacaagagaaac
aactaaaagtgtaattagtcattgcctatgttaatttttttatgcttggt
gttccaaatcagattaaaacagatattggaactggctattacagtcaagt
atttgagatgtattgtcaacaatttaatgttacccatgttactgagatgt
ttttaattctcaaggacaaggtattgtggaactttagaaactatatcttc
tttaaaaaacaaaggggaggaattatatccctgtgtacattatttaaatc
acactttttatttttaaaattttaaaatattggatgccaaagaactcctt
gctgagtgccttatattatcttaaaactagacatactcatgctgaaagac
ccacaacgtgaggactcccccacgttctgactcaggagaggcgacacccc
aaaatcaccaatgagaaacggtcttgctgcaaattgcaagaggattttta
ttcaagagcgctctcgggcccatggtcatacaccacgcaggggtagagga
ccgtggcgccccgagtagctggattagggggatttaaaggagaaaccaca
cttaagaagtgggaagggcgttgttgaaaatccaaat

gaattctccttttgttgtaaatcaactggtgaatcttctatgacacataa
gataatggctccataggacgatgaattacactggaagtgctatatttaat
agcatcactgacacagacagccatgatgaagccctgaacagaagagcatt
caattctaaaagagagtttcattagaagaaatagccactatagagaccat
gacaggattctctaagagagagagagatcaatccttcagttctagtcagc
tccatggaaatagtttatgctgtgaattgcaatgatagtcttatagatag
cccatgctatatcattcaaaattcctatcttttttgacaatttaattata
atgcataatagtggaatcatttttatgttcatactacttgggattatata
ggcatatgtccaggttttttaaattatttttattgtgtatatacatgtgt
ggtacacctgtgcatatgcttggtatatgcatactatggcacaagtatgt
ggtagtaatatgacaacggaggagtcagttctcaccctccattatgggat
ctagggatggaactgaggtgccaggcttgtgcagccttttcacctgccat
ctcagcatccctatttaggcttcattattctggatgtctgtttcctttac
tgacttgggagtttcctgcccattattcctttaaggattttttctacttt
ctctttctccatcttctagttcttccacagtatataacctcctggaagga
aacagtattattggctgttgaagaacacactatcacagtaccacggtaga
actccagtagcagagagggcaaaactacaggggtcattgatgacaaaagt
tacagaatccaagattgttgcatcatctatgtaaaggtcttggggtatgt
ttctgctctccttctctgatccaggatgattcctctgtgctgaggtctgc
tagccagaaagatgggttgactccagtaagactaacctcaaccttttatc
cttttcttgtgtttttataacagatagcttctctattctttataaaggga
agtctatctttaatgttcacctcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16695274_16696346
seq2: B6Ng01-334I01.g_66_1141

seq1  GAATTCTCCTTTTGTTGTAAATCAACTGGTGAATCTTCTATGACACATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTGTTGTAAATCAACTGGTGAATCTTCTATGACACATAA  50

seq1  GATAATGGCTCCATAGGACGATGAATTACACTGGAAGTGCTATATTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGGCTCCATAGGACGATGAATTACACTGGAAGTGCTATATTTAAT  100

seq1  AGCATCACTGACACAGACAGCCATGATGAAGCCCTGAACAGAAGAGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACTGACACAGACAGCCATGATGAAGCCCTGAACAGAAGAGCATT  150

seq1  CAATTCTAAAAGAGAGTTTCATTAGAAGAAATAGCCACTATAGAGACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTAAAAGAGAGTTTCATTAGAAGAAATAGCCACTATAGAGACCAT  200

seq1  GACAGGATTCTCTAAGAGAGAGAGAGATCAATCCTTCAGTTCTAGTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATTCTCTAAGAGAGAGAGAGATCAATCCTTCAGTTCTAGTCAGC  250

seq1  TCCATGGAAATAGTTTATGCTGTGAATTGCAATGATAGTCTTATAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGAAATAGTTTATGCTGTGAATTGCAATGATAGTCTTATAGATAG  300

seq1  CCCATGCTATATCATTCAAAATTCCTATCTTTTTTGACAATTTAATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCTATATCATTCAAAATTCCTATCTTTTTTGACAATTTAATTATA  350

seq1  ATGCATAATAGTGGAATCATTTTTATGTTCATACTACTTGGGATTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAATAGTGGAATCATTTTTATGTTCATACTACTTGGGATTATATA  400

seq1  GGCATATGTCCAGGTTTTTTAAATTATTTTTATTGTGTATATACATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGTCCAGGTTTTTTAAATTATTTTTATTGTGTATATACATGTGT  450

seq1  GGTACACCTGTGCATATGCTTGGTATATGCATACTATGGCACAAGTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACCTGTGCATATGCTTGGTATATGCATACTATGGCACAAGTATGT  500

seq1  GGTAGTAATATGACAACGGAGGAGTCAGTTCTCACCCTCCATTATGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAATATGACAACGGAGGAGTCAGTTCTCACCCTCCATTATGGGAT  550

seq1  CTAGGGATGGAACTGAGGTGCCAGGCTTGTGCAGCCTTTTCACCTGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGATGGAACTGAGGTGCCAGGCTTGTGCAGCCTTTTCACCTGCCAT  600

seq1  CTCAGCATCCCTATTTAGGCTTCATTATTCTGGATGTCTGTTTCCTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATCCCTATTTAGGCTTCATTATTCTGGATGTCTGTTTCCTTTAC  650

seq1  TGACTTGGGAGTTTCCTGCCCATTATTCCTTTAAGGATTTTTTCTACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGGGAGTTTCCTGCCCATTATTCCTTTAAGGATTTTTTCTACTTT  700

seq1  CTCTTTCTCCATCTTCTAGTTCTTCCACAGTATATAACCTCCTGGAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCCATCTTCTAGTTCTTCCACAGTATATAACCTCCTGGAAGGA  750

seq1  AACAGTATTATTGGCTGTTGAAGAACACACTATCACAGTACCACGGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATTATTGGCTGTTGAAGAACACACTATCACAGTACCACGGTAGA  800

seq1  ACTCCAGTAGCAGAGAGGGCAAAAACTACAGGGGTCATTGATGACAAAAG  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTCCAGTAGCAGAGAGGGC-AAAACTACAGGGGTCATTGATGACAAAAG  849

seq1  TTACAGAATCCAAGATTGTTGCATCATCTATGTAAAGGTCTTGGGGTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAATCCAAGATTGTTGCATCATCTATGTAAAGGTCTTGGGGTATG  899

seq1  TTTCTGCTCTCCTTCTCTGATCCAGGATGATTCCTCTGTGCTGAGGTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCTCCTTCTCTGATCCAGGATGATTCCTCTGTGCTGAGGTCTG  949

seq1  CTAGCCAGAAAGATGGG-TGACTCCAGTAAGACTAAACTCAACC-TTTAT  998
      ||||||||||||||||| |||||||||||||||||| ||||||| |||||
seq2  CTAGCCAGAAAGATGGGTTGACTCCAGTAAGACTAACCTCAACCTTTTAT  999

seq1  CCTTTTC-TGTGTTTTTATAA-AGATAGCTTCCTCTA-TCTTTATAAAGG  1045
      ||||||| ||||||||||||| ||||||||| ||||| ||||||||||||
seq2  CCTTTTCTTGTGTTTTTATAACAGATAGCTT-CTCTATTCTTTATAAAGG  1048

seq1  GAAGTCTATCTTTAAATGTCACCTCCTG  1073
      |||||||||||||||   ||||||||||
seq2  GAAGTCTATCTTTAATGTTCACCTCCTG  1076


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