BAC Information

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BAC

Clone NameB6Ng01-336F23
Chromosome14 (Build37)
Map Location 120,267,336 - 120,268,468
singlet/doubletsinglet
Overlap geneHs6st3
Upstream geneCldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601, EG621324, LOC100043830
Downstream geneOxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336F23.bB6Ng01-336F23.g
ACCGA121315GA121316
length7551,133
definitionB6Ng01-336F23.b B6Ng01-336F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaacgtacc
acattttctgtatccattcttctgttgagggacatctgggtgctttccag
cttctggctattataaatatggctgctatgaacatagtggagcgtttgtc
tttattaccagttggaacatctcatgggtatatgcccaggaaaggtattg
caggatcctcccgtagtactatgtccaattttctgaagaaccgccagact
gatttccagagtggttgtacaagcttgcaatcccaccagaggagtgatct
tctctctctacatccttgccagcatctgctgtcacctgaatttttgatct
tagccattctgactgatgtgagatggaatctcagggttgttttgatttgc
atttccctgatgattaaggatgctgaacattttttcaggtgcttctcagc
catttggtattcctcgggtgagaattctttgtttagctctgagccgcatt
tttaatggggttatttgattttctggagtccaccttcttgagttcttatg
tactcactgataagtggatattagaccagaaacttagaatacccaagata
caagatacaatttgcaaaacacatgaaagccaagaagattgaaaaccaaa
gtgtgggcactttgccccttcttagaattgggaacaaaacacccatggaa
ggagttacagagacaagttttggagctgagacgaaaaggatggaaccatc
tagag
gaattcagtgagcccaaagaaggccatattcttcagattgttcttagcgc
tctgcagcaggatggtgttccgctcgctctcattcatgaaagtcaagttg
tagcagcccaccaggctgaggtcggccagcatgcgcacttggcggttgtt
ggccaggttgtagctacaatccatgaactcccgcaagctgaccccagacc
agtcatccccaggatagcaggtaggcagctcatctggtgtggggctcctt
ccgtcgcacatatggagagaggttttccatgtggcccctctctggacatg
cttccattcgctcaggtaacgtgacactgggtcccgcaacatcgtgatgt
agtagaaattcctggaagagattagaggagacggtcagcggctgacaact
gtttatggagacgtttttaccccattgaatgtgggtgggagccaagtgaa
tcctccattcactgcttcatttcctccgcacttagtctggataaatactg
atgccttcaatagtaaacacaaatcacccatcggaccctacgcattatct
gttttatttgagccttataccaaacttttgtattgtatgtattgtgtgta
ttggaaacatacaaggtcatagaaccaaaatttcaagaccaaaacctaat
ccttcttcatatttcctcatgacattgctactcagattataagccttgaa
ggggagaggttaagtgcccatcacacccttgtcacttgaagtgattcaga
agaaactggaggtctgtttgtcacagaagccacagaagagactctgcaga
aaaacagggtacacacaagccctctgagctccatttctgaaaccctaaat
tttcccattgcctttccacaggagatagtttgattctacgtcagtcccag
tccagtcctgcctcactgctacaggcatgctctaggatagagagcaatca
ggttaactcagagttgctctggagaccacaggtatggttccatgatgctc
ttgggaaggatcctcagacagccccagtacaatgcttttgcatgcttcca
gtggaacagaaaagtggcctgctatgccctgaaggatgagaatgtggcag
tgtttcttgcactgcttgggaactcaaggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120267336_120268468
seq2: B6Ng01-336F23.g_66_1198 (reverse)

seq1  TTCTCCTCTGAGTT-CCAAGCAGGTGGCAGAAACACTGCACAATTCTCCT  49
      ||||||| |||||| ||||||| |||  |||||||||||   |||||| |
seq2  TTCTCCT-TGAGTTCCCAAGCA-GTGCAAGAAACACTGCCACATTCTCAT  48

seq1  TCCCTTCAGGGCATAGCAGGCCAC-TTTCTG-TCCACTTGGAAGCATGC-  96
        |||||||||||||||||||||| |||||| ||||| ||||||||||| 
seq2  --CCTTCAGGGCATAGCAGGCCACTTTTCTGTTCCAC-TGGAAGCATGCA  95

seq1  AAAGCATTGTACTGGGGCTGTCTGAGG-TTCTTCCC-AGAGCATCATGGA  144
      ||||||||||||||||||||||||||| | |||||| |||||||||||| 
seq2  AAAGCATTGTACTGGGGCTGTCTGAGGATCCTTCCCAAGAGCATCATGG-  144

seq1  AACCATACCTGT-GTCTCCAGAGCAACTCTGAGTTAACCTGATTGGCTCT  193
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  AACCATACCTGTGGTCTCCAGAGCAACTCTGAGTTAACCTGATT-GCTCT  193

seq1  CTATTCCTAGAGCATGCCTGTAGCAGTGAGGCAGGACTGGACTGGGACTG  243
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTA-TCCTAGAGCATGCCTGTAGCAGTGAGGCAGGACTGGACTGGGACTG  242

seq1  ACGTAGAATCAAACTATCTCCTGTGGAAAGGCAATGGGAAAA-TTAGGGT  292
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACGTAGAATCAAACTATCTCCTGTGGAAAGGCAATGGGAAAATTTAGGGT  292

seq1  TTCAGAAATGGAGCTCAGAGGGCTTGTGTGTACCCTGTTTTTCTGCAGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATGGAGCTCAGAGGGCTTGTGTGTACCCTGTTTTTCTGCAGAG  342

seq1  TCTCTTCTGTGGCTTCTGTGACAAACAGACCTCCAGTTTCTTCTGAATCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGTGGCTTCTGTGACAAACAGACCTCCAGTTTCTTCTGAATCA  392

seq1  CTTCAAGTGACAAGGGTGTGATGGGCACTTAACCTCTCCCCTTCAAGGCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTGACAAGGGTGTGATGGGCACTTAACCTCTCCCCTTCAAGGCT  442

seq1  TATAATCTGAGTAGCAATGTCATGAGGAAATATGAAGAAGGATTAGGTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTGAGTAGCAATGTCATGAGGAAATATGAAGAAGGATTAGGTTT  492

seq1  TGGTCTTGAAATTTTGGTTCTATGACCTTGTATGTTTCCAATACACACAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGAAATTTTGGTTCTATGACCTTGTATGTTTCCAATACACACAA  542

seq1  TACATACAATACAAAAGTTTGGTATAAGGCTCAAATAAAACAGATAATGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAATACAAAAGTTTGGTATAAGGCTCAAATAAAACAGATAATGC  592

seq1  GTAGGGTCCGATGGGTGATTTGTGTTTACTATTGAAGGCATCAGTATTTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTCCGATGGGTGATTTGTGTTTACTATTGAAGGCATCAGTATTTA  642

seq1  TCCAGACTAAGTGCGGAGGAAATGAAGCAGTGAATGGAGGATTCACTTGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACTAAGTGCGGAGGAAATGAAGCAGTGAATGGAGGATTCACTTGG  692

seq1  CTCCCACCCACATTCAATGGGGTAAAAACGTCTCCATAAACAGTTGTCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCCACATTCAATGGGGTAAAAACGTCTCCATAAACAGTTGTCAG  742

seq1  CCGCTGACCGTCTCCTCTAATCTCTTCCAGGAATTTCTACTACATCACGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGACCGTCTCCTCTAATCTCTTCCAGGAATTTCTACTACATCACGA  792

seq1  TGTTGCGGGACCCAGTGTCACGTTACCTGAGCGAATGGAAGCATGTCCAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCGGGACCCAGTGTCACGTTACCTGAGCGAATGGAAGCATGTCCAG  842

seq1  AGAGGGGCCACATGGAAAACCTCTCTCCATATGTGCGACGGAAGGAGCCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGCCACATGGAAAACCTCTCTCCATATGTGCGACGGAAGGAGCCC  892

seq1  CACACCAGATGAGCTGCCTACCTGCTATCCTGGGGATGACTGGTCTGGGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGATGAGCTGCCTACCTGCTATCCTGGGGATGACTGGTCTGGGG  942

seq1  TCAGCTTGCGGGAGTTCATGGATTGTAGCTACAACCTGGCCAACAACCGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGCGGGAGTTCATGGATTGTAGCTACAACCTGGCCAACAACCGC  992

seq1  CAAGTGCGCATGCTGGCCGACCTCAGCCTGGTGGGCTGCTACAACTTGAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCGCATGCTGGCCGACCTCAGCCTGGTGGGCTGCTACAACTTGAC  1042

seq1  TTTCATGAATGAGAGCGAGCGGAACACCATCCTGCTGCAGAGCGCTAAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAATGAGAGCGAGCGGAACACCATCCTGCTGCAGAGCGCTAAGA  1092

seq1  ACAATCTGAAGAATATGGCCTTCTTTGGGCTCACTGAATTC  1133
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGAAGAATATGGCCTTCTTTGGGCTCACTGAATTC  1133