BAC Information

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BAC

Clone NameB6Ng01-337G23
Chromosome14 (Build37)
Map Location 120,777,410 - 120,931,633
singlet/doubletdoublet
Overlap geneMbnl2, Rap2a
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337G23.bB6Ng01-337G23.g
ACCGA122064GA122065
length1,1531,158
definitionB6Ng01-337G23.b B6Ng01-337G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,930,344 - 120,931,633)(120,777,410 - 120,778,549)
sequence
gaattcctggcaggagaactgaagaagggagggagtggggaccagtgatt
cctgtaagtcggctgtggcctggggtaccactccctgacagctgctgccc
ctcacccagcacccagcttgccccggcctctagatgctgtaacactcact
actgggtctcctagcacaggcacggtaacagcttccctgctgccactgtc
tgaggtccccttatgtctctcctacccagtctacacctttgtaaattagc
tactttctaaataagcccctggtagattctcttaatttgcttgtgccttc
tgttcccctggggccttgacctgcacaacgatttcagctctctgttgtac
tgttactgtgacctacaatagaggacagaaaagtgatagagaaatttcta
gaaactcccaaaaatctctgtccaatatagcatctctaattgtcaaacca
cctgtgatagtttcttttctgttactatgacaaaatacccctgcagaagc
agcctccagggagaaagggtctatcttagctcacagttccagcccatcat
ggtgaggatggcttggtagcaaaagcgtgaggctggcctggaggtcagga
agcaagataaaaggagaaagggccaggctataaaccctcaaagctcaccc
ctagtgacagatatacttcttccagctaggctctacctcccaatgtttcc
ataaactttcaaaacagcaggaggccaccagccgggaccaagtgtcccag
tatctgagcatgtgaggacatctcagcacacaccagagttcacccctctc
tgctgactggctgtcttttctgttttctgttttctgttttctgtttctgt
tttctgtttctgtttctttttctttttttttttttctttaattgttttgt
tattgaaatagacaccattgtcaaggcaacttataaatggaagcatttaa
ttggaagtgccctttgatgtttcagagagtacatgatcacatggccggga
gcttgtggcagtaagccatggtgctgttttgctgaagactcacatcttat
cccacagtgacagctgaggagacttggggcttgggttagccctgaaaacg
taagctttctcctaccgcattagaccaggttctctttacagcaggtccaa
cct
gaattctcactagaggagaagccagagatgccagcagtgcagctggaatt
aatagagacagagagagagctccagaggtcgtacttcagagtagctataa
acaaagccgttcctccagctcctccacacttgctttaatttttattttta
tctgataaacaaacccgtatactttttgccaggttgcagataaactaatt
ctttggggaatattgatattccaactgcctgccacagtttgctcttcttt
ccctagaaattgcctaactcgcacagaagtgcaattctcacatgattggt
agttttgcatactttggggttttgcagttccagacgcagtgacgcttcag
gtctgtttgtacacactcatcgcctaatggtttttctcatgctacccatg
tccgtgtccagaagataacacagccatgagcacgccttactttgtcatct
ttgatttcaagtcagattcttcagtcatggggaagggtgggagctttgta
ttcgtgtcaaacatgcaggtgcttatccagctcacagcagcgatcgcctg
ggtgggtatcagtcagcagttccaggagttcggtccctattgcccacact
caacagctgcaaactcatgtctttggctagtctggatcacacacataaaa
cttacttccatcttcattccaagaagggaaggcggttcaagaaagggaga
acagagggaggggaaagacgaggggaggggcctggataatcgtgtaatat
ttgattcgttctctgtaacacacacacacaaacatatgcacacatacaca
catgcatatgtgtatgcacacacgggcatacatgcatacacacacgcaca
cgcaccaccctttgccttggaacataaaggaatgaaagtaatgacttcga
cattgtttggcaatggagtccctggcttctcgagtgcaatcctaacccta
agattgtccgttttgcagggccgtctgttcaagagaagactgcaaattat
ctttcattcctcgaaccactttaaaaaactcagcctagaagattaattgg
gagaacaatttgatccaagcaaaaacttgcaggcagcgaatgcctgccag
cagatgtcaatttatgttcccaggaacgccgcctctattcttgtggtgaa
gtgtcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120930344_120931633
seq2: B6Ng01-337G23.b_48_1200 (reverse)

seq1  AGGTTGGACCTGACAGCCTGATGGTGAACAGCTGAGGGAACCTGCTCACG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGTCCATAGCCAGTGAAGGAGAATGGCTCCCATAGGCTCCCATATTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTTTGCTCCTCAGCTGGTAGCACTGATTGGAAGGATTAGGTTTGACC  150
                                              ||||| ||||
seq2  ----------------------------------------AGGTTGGACC  10

seq1  TTGCTG-AAAGAG-ACGTG--CTAATGCGGTGGGGGAGGCTTTACGTTTT  196
       ||||| |||||| || ||  |||||||||| || ||    |||||||||
seq2  -TGCTGTAAAGAGAACCTGGTCTAATGCGGTAGGAGAAAGCTTACGTTTT  59

seq1  CAAGGCT-ACCCAAGGCCC-AGTCTCCTCAGCTTGTCACCTGT-GGAT-A  242
      || |||| ||||||| ||| |||||||||||| ||||| |||| |||| |
seq2  CAGGGCTAACCCAAGCCCCAAGTCTCCTCAGC-TGTCA-CTGTGGGATAA  107

seq1  GATGTGAGCTCTCAGCATACCAGCACCATGCCTACCTGCCACCAGGCTCC  292
      ||||||||   |||||| | |||||||||| ||  |||||| || |||||
seq2  GATGTGAGTCTTCAGCAAAACAGCACCATGGCTTACTGCCA-CAAGCTCC  156

seq1  CCGCCATGGTGATCATGTACTCTCTGAAACATC-AAGGGCACCTCCAATT  341
      | ||||| ||||||||||||||||||||||||| |||||||| |||||||
seq2  CGGCCAT-GTGATCATGTACTCTCTGAAACATCAAAGGGCACTTCCAATT  205

seq1  AAATGCTTCCATTTATAAGTTGCCTTGACAATGGTGTCTATTTACAATAA  391
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATGCTTCCATTTATAAGTTGCCTTGACAATGGTGTCTATTT-CAATAA  254

seq1  CAAAACAATTAAAAGAAAAAAAAAAAAGAAAAAGAAACAGAAACAGAAAA  441
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  CAAAACAATTAAAGAAAAAAAAAAAAAGAAAAAGAAACAGAAACAGAAAA  304

seq1  CAGAAACAGAAAACAGAAAACAGAAAACAGAAAAGACAGCCAGTCAGCAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGAAAACAGAAAACAGAAAACAGAAAAGACAGCCAGTCAGCAG  354

seq1  AGAGGGGTGAACTCTGGTGTGTGCTGAGATGTCCTCACATGCTCAGATAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTGAACTCTGGTGTGTGCTGAGATGTCCTCACATGCTCAGATAC  404

seq1  TGGGACACTTGGTCCCGGCTGGTGGCCTCCTGCTGTTTTGAAAGTTTATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACACTTGGTCCCGGCTGGTGGCCTCCTGCTGTTTTGAAAGTTTATG  454

seq1  GAAACATTGGGAGGTAGAGCCTAGCTGGAAGAAGTATATCTGTCACTAGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTGGGAGGTAGAGCCTAGCTGGAAGAAGTATATCTGTCACTAGG  504

seq1  GGTGAGCTTTGAGGGTTTATAGCCTGGCCCTTTCTCCTTTTATCTTGCTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCTTTGAGGGTTTATAGCCTGGCCCTTTCTCCTTTTATCTTGCTT  554

seq1  CCTGACCTCCAGGCCAGCCTCACGCTTTTGCTACCAAGCCATCCTCACCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTCCAGGCCAGCCTCACGCTTTTGCTACCAAGCCATCCTCACCA  604

seq1  TGATGGGCTGGAACTGTGAGCTAAGATAGACCCTTTCTCCCTGGAGGCTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGCTGGAACTGTGAGCTAAGATAGACCCTTTCTCCCTGGAGGCTG  654

seq1  CTTCTGCAGGGGTATTTTGTCATAGTAACAGAAAAGAAACTATCACAGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGGGGTATTTTGTCATAGTAACAGAAAAGAAACTATCACAGGT  704

seq1  GGTTTGACAATTAGAGATGCTATATTGGACAGAGATTTTTGGGAGTTTCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACAATTAGAGATGCTATATTGGACAGAGATTTTTGGGAGTTTCT  754

seq1  AGAAATTTCTCTATCACTTTTCTGTCCTCTATTGTAGGTCACAGTAACAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTCTCTATCACTTTTCTGTCCTCTATTGTAGGTCACAGTAACAG  804

seq1  TACAACAGAGAGCTGAAATCGTTGTGCAGGTCAAGGCCCCAGGGGAACAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACAGAGAGCTGAAATCGTTGTGCAGGTCAAGGCCCCAGGGGAACAG  854

seq1  AAGGCACAAGCAAATTAAGAGAATCTACCAGGGGCTTATTTAGAAAGTAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACAAGCAAATTAAGAGAATCTACCAGGGGCTTATTTAGAAAGTAG  904

seq1  CTAATTTACAAAGGTGTAGACTGGGTAGGAGAGACATAAGGGGACCTCAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTACAAAGGTGTAGACTGGGTAGGAGAGACATAAGGGGACCTCAG  954

seq1  ACAGTGGCAGCAGGGAAGCTGTTACCGTGCCTGTGCTAGGAGACCCAGTA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGCAGCAGGGAAGCTGTTACCGTGCCTGTGCTAGGAGACCCAGTA  1004

seq1  GTGAGTGTTACAGCATCTAGAGGCCGGGGCAAGCTGGGTGCTGGGTGAGG  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTTACAGCATCTAGAGGCCGGGGCAAGCTGGGTGCTGGGTGAGG  1054

seq1  GGCAGCAGCTGTCAGGGAGTGGTACCCCAGGCCACAGCCGACTTACAGGA  1241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGCTGTCAGGGAGTGGTACCCCAGGCCACAGCCGACTTACAGGA  1104

seq1  ATCACTGGTCCCCACTCCCTCCCTTCTTCAGTTCTCCTGCCAGGAATTC  1290
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGGTCCCCACTCCCTCCCTTCTTCAGTTCTCCTGCCAGGAATTC  1153

seq1: chr14_120777410_120778549
seq2: B6Ng01-337G23.g_69_1226

seq1  GAATTCTCACTAGAGGAGAAGCCAGAGATGCCAGCAGTGCAGCTGGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTAGAGGAGAAGCCAGAGATGCCAGCAGTGCAGCTGGAATT  50

seq1  AATAGAGACAGAGAGAGAGCTCCAGAGGTCGTACTTCAGAGTAGCTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGACAGAGAGAGAGCTCCAGAGGTCGTACTTCAGAGTAGCTATAA  100

seq1  ACAAAGCCGTTCCTCCAGCTCCTCCACACTTGCTTTAATTTTTATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCGTTCCTCCAGCTCCTCCACACTTGCTTTAATTTTTATTTTTA  150

seq1  TCTGATAAACAAACCCGTATACTTTTTGCCAGGTTGCAGATAAACTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAAACAAACCCGTATACTTTTTGCCAGGTTGCAGATAAACTAATT  200

seq1  CTTTGGGGAATATTGATATTCCAACTGCCTGCCACAGTTTGCTCTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGAATATTGATATTCCAACTGCCTGCCACAGTTTGCTCTTCTTT  250

seq1  CCCTAGAAATTGCCTAACTCGCACAGAAGTGCAATTCTCACATGATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAAATTGCCTAACTCGCACAGAAGTGCAATTCTCACATGATTGGT  300

seq1  AGTTTTGCATACTTTGGGGTTTTGCAGTTCCAGACGCAGTGACGCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCATACTTTGGGGTTTTGCAGTTCCAGACGCAGTGACGCTTCAG  350

seq1  GTCTGTTTGTACACACTCATCGCCTAATGGTTTTTCTCATGCTACCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTGTACACACTCATCGCCTAATGGTTTTTCTCATGCTACCCATG  400

seq1  TCCGTGTCCAGAAGATAACACAGCCATGAGCACGCCTTACTTTGTCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTCCAGAAGATAACACAGCCATGAGCACGCCTTACTTTGTCATCT  450

seq1  TTGATTTCAAGTCAGATTCTTCAGTCATGGGGAAGGGTGGGAGCTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCAAGTCAGATTCTTCAGTCATGGGGAAGGGTGGGAGCTTTGTA  500

seq1  TTCGTGTCAAACATGCAGGTGCTTATCCAGCTCACAGCAGCGATCGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTCAAACATGCAGGTGCTTATCCAGCTCACAGCAGCGATCGCCTG  550

seq1  GGTGGGTATCAGTCAGCAGTTCCAGGAGTTCGGTCCCTATTGCCCACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTATCAGTCAGCAGTTCCAGGAGTTCGGTCCCTATTGCCCACACT  600

seq1  CAACAGCTGCAAACTCATGTCTTTGGCTAGTCTGGATCACACACATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCTGCAAACTCATGTCTTTGGCTAGTCTGGATCACACACATAAAA  650

seq1  CTTACTTCCATCTTCATTCCAAGAAGGGAAGGCGGTTCAAGAAAGGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCCATCTTCATTCCAAGAAGGGAAGGCGGTTCAAGAAAGGGAGA  700

seq1  ACAGAGGGAGGGGAAAGACGAGGGGAGGGGCCTGGATAATCGTGTAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGAGGGGAAAGACGAGGGGAGGGGCCTGGATAATCGTGTAATAT  750

seq1  TTGATTCGTTCTCTGTAACACACACACACAAACATATGCACACATACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCGTTCTCTGTAACACACACACACAAACATATGCACACATACACA  800

seq1  CATGCATATGTGTATGCACACACGGGCATACATGCATACACACACGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATATGTGTATGCACACACGGGCATACATGCATACACACACGCACA  850

seq1  CGCACCACCC-TTGCCTTGGAACAT-AAGGAATGAAAGTAATGAC-TCGA  897
      |||||||||| |||||||||||||| ||||||||||||||||||| ||||
seq2  CGCACCACCCTTTGCCTTGGAACATAAAGGAATGAAAGTAATGACTTCGA  900

seq1  CATTG-TTGGCAATGGAGTCCCTGGC-TCCCGAGTGCAATCCTAACCCT-  944
      ||||| |||||||||||||||||||| || ||||||||||||||||||| 
seq2  CATTGTTTGGCAATGGAGTCCCTGGCTTCTCGAGTGCAATCCTAACCCTA  950

seq1  AGATTGTCCGTTTTGCAGGGCCG-CTGTTCAAGAGAGAACTGCAAA-TAT  992
      ||||||||||||||||||||||| ||||||||||||  |||||||| |||
seq2  AGATTGTCCGTTTTGCAGGGCCGTCTGTTCAAGAGAAGACTGCAAATTAT  1000

seq1  C-TTCATCCTCCGACACACTT--AAAAACCCAG-CTAG-AGATTAATGGG  1037
      | ||||| |  |||  |||||  |||||| ||| |||| |||||||| ||
seq2  CTTTCATTCCTCGAACCACTTTAAAAAACTCAGCCTAGAAGATTAATTGG  1050

seq1  AGGAACAATTTGATCC-AGCAAAAAACTGCA-GCAGCG-ATGCTTGCCCA  1084
        |||||||||||||| ||||||||  |||| |||||| |||| || |||
seq2  GAGAACAATTTGATCCAAGCAAAAACTTGCAGGCAGCGAATGCCTG-CCA  1099

seq1  GCAGATG-CAATTTATGTTTCCAGGAACGCCG-CTCCA-TCCTGTGGTG-  1130
      ||||||| ||||||||||| |||||||||||| ||| | || ||||||| 
seq2  GCAGATGTCAATTTATGTTCCCAGGAACGCCGCCTCTATTCTTGTGGTGA  1149

seq1  AGTGTGCCTT  1140
      ||||| ||||
seq2  AGTGT-CCTT  1158