BAC Information

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BAC

Clone NameB6Ng01-337M14
Chromosome14 (Build37)
Map Location 84,478,220 - 84,479,316
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
Downstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337M14.bB6Ng01-337M14.g
ACCGA122302GA122303
length1,0971,107
definitionB6Ng01-337M14.b B6Ng01-337M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttaaatcttctttacaatgttcattgataaaaactaccattta
acttatatctaaaacttaacttaaagcacacttatttagtatgggtcaat
agagggccactatggacacattagagggccctcttccttggagtactcat
taggtatatgcaattctcttgttttaaattaagttaaatttaggctttca
tgtacacatgactgaagaaagatttctttttaaggttagagctttcccta
atccaggttagagaacctagattgctctagtgcttttgttctatagattt
ttttcttttcttttcttttcttttcttttcttttcttttcttttcttttc
ttttcttctcttcttttcattttcttttcttttctcttttcttttctttt
cttttctcttcttttcttttagtatttatttatttatttatttattcatc
tatttatttatttgggtggctagaattgttttccaaaccattctttgagg
caattctttatttaggtttttcttaatttttgagattttgtagatgagca
gtgtagttatattattcctaattttcatatacatatatgacattgacgat
atatgaagagagtggagagagcaagagtgagagggaccattttgagttgc
ttatatgtgcacataattagaatatgtggaattggatcaggagactgagg
agattagtcgttgaagaaaaataattcttgctctctcagtggttattgat
tgtctgaaactgtttttcagatggagaattgatagaggttgtgaaatttc
tcccatccacattatcatgttgagtagagttttcagcatgaagaacttgt
atctgaagtcaaattattgggattccacaagtttccaatctccttaatgt
tgaggaggcattctctagcagaggtatcccaatcatttggcactactatt
tgttccattatccatgaaccttaaatataaaggttgcattatagctctac
caaatggatcttggcactctaggtttgaatatctctgtagtttgatcaga
gctatatggtctctagaactgtttctattatgctgaaaaaatagaca
gaattcagtaagaatgttacctattcagtaacattcaaattcacttgtag
tggagacagtgaaactagttaggcattacaatttacttgaatagagctag
aaaagctcagggctagtctgcatagtaattacttaggataagagctgagt
cacacccacacacaggaatacacaacggcctaggaaataggtaggctgta
gtatgaaagggttagtagaatggacttcccctgttgctggttttttgttt
ttttgctttctaggcccagaggaatagtggaatcaggtatttactgaagg
acccctggtggtgggtttaacaatagactagcattgtatctgagcattca
cctgtctcctgtgcttagcttatcttaattagggttgttcctattctcag
ttgtaaacaaggcctggctcccaccatctttttatgtatacatttccttg
ttttgtgttaagaaccagtgtaccttgatggatgtatttgcctagccttc
tagtttttcttctgtattaaaagtctggtgtttgcttagaaaaaattgca
tccagatacagcactcccttgtgtctgtgtcggtttgtcatctctcgcca
atgccaactccatgcccatctgctggaacccctaatttccacggattgag
aggcctactgagccctgtctacggcaggaaaggacatagtcaatagacaa
ataggcacttacagattgggaaaaaaaaaagtcatcactaaacccacatc
caatagagggctaatatccaaaatatataaagagtcagaaattatcacca
aaaaaaaccaacacccatttaggaattgagaaaaatagattttaccattt
tagtatattttaagagagaggatgtagtattctgtatattatgggatgga
taaatcactacttccaaatatttctctcatctgttgggtgttgttctatt
gcaatatggtaggattaatataggagatgcttaataactggtccatttcc
tcagttggaatcagaatgcgaaaggatcaccatttaatggatcctgtctt
acgtagtatcgcaactcatgatccatagacctttgcgatgcacgtccgtt
gttcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84478220_84479316
seq2: B6Ng01-337M14.b_47_1143

seq1  GAATTCCTTAAATCTTCTTTACAATGTTCATTGATAAAAACTACCATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAATCTTCTTTACAATGTTCATTGATAAAAACTACCATTTA  50

seq1  ACTTATATCTAAAACTTAACTTAAAGCACACTTATTTAGTATGGGTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATCTAAAACTTAACTTAAAGCACACTTATTTAGTATGGGTCAAT  100

seq1  AGAGGGCCACTATGGACACATTAGAGGGCCCTCTTCCTTGGAGTACTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCCACTATGGACACATTAGAGGGCCCTCTTCCTTGGAGTACTCAT  150

seq1  TAGGTATATGCAATTCTCTTGTTTTAAATTAAGTTAAATTTAGGCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATATGCAATTCTCTTGTTTTAAATTAAGTTAAATTTAGGCTTTCA  200

seq1  TGTACACATGACTGAAGAAAGATTTCTTTTTAAGGTTAGAGCTTTCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACATGACTGAAGAAAGATTTCTTTTTAAGGTTAGAGCTTTCCCTA  250

seq1  ATCCAGGTTAGAGAACCTAGATTGCTCTAGTGCTTTTGTTCTATAGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTTAGAGAACCTAGATTGCTCTAGTGCTTTTGTTCTATAGATTT  300

seq1  TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC  350

seq1  TTTTCTTCTCTTCTTTTCATTTTCTTTTCTTTTCTCTTTTCTTTTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTCTTCTTTTCATTTTCTTTTCTTTTCTCTTTTCTTTTCTTTT  400

seq1  CTTTTCTCTTCTTTTCTTTTAGTATTTATTTATTTATTTATTTATTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTCTTTTCTTTTAGTATTTATTTATTTATTTATTTATTCATC  450

seq1  TATTTATTTATTTGGGTGGCTAGAATTGTTTTCCAAACCATTCTTTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTGGGTGGCTAGAATTGTTTTCCAAACCATTCTTTGAGG  500

seq1  CAATTCTTTATTTAGGTTTTTCTTAATTTTTGAGATTTTGTAGATGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTTATTTAGGTTTTTCTTAATTTTTGAGATTTTGTAGATGAGCA  550

seq1  GTGTAGTTATATTATTCCTAATTTTCATATACATATATGACATTGACGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTATATTATTCCTAATTTTCATATACATATATGACATTGACGAT  600

seq1  ATATGAAGAGAGTGGAGAGAGCAAGAGTGAGAGGGACCATTTTGAGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGAGAGTGGAGAGAGCAAGAGTGAGAGGGACCATTTTGAGTTGC  650

seq1  TTATATGTGCACATAATTAGAATATGTGGAATTGGATCAGGAGACTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTGCACATAATTAGAATATGTGGAATTGGATCAGGAGACTGAGG  700

seq1  AGATTAGTCGTTGAAGAAAAATAATTCTTGCTCTCTCAGTGGTTATTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTCGTTGAAGAAAAATAATTCTTGCTCTCTCAGTGGTTATTGAT  750

seq1  TGTCTGAAACTGTTTTTCAGATGGAGAATTGATAGAGGTTGTGAAATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAACTGTTTTTCAGATGGAGAATTGATAGAGGTTGTGAAATTTC  800

seq1  TCCCATCCACATTATCATGTTGAGTAGAGTTTTCAGCATGAAGAACTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCACATTATCATGTTGAGTAGAGTTTTCAGCATGAAGAACTTGT  850

seq1  ATCTGAAGTCAAATTATTGGGATTCCACAAGTTTCCAATCTCCTTAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGTCAAATTATTGGGATTCCACAAGTTTCCAATCTCCTTAATGT  900

seq1  TGAGGAGGCATTCTCTAGCAGGAGGTATCCCAATCATTTGGCACTACTAT  950
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TGAGGAGGCATTCTCTAGCA-GAGGTATCCCAATCATTTGGCACTACTA-  948

seq1  TTTGTTCCATTATCCATGAACCTTAAATATAAAGGTTGCATTATAGCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCATTATCCATGAACCTTAAATATAAAGGTTGCATTATAGCTCT  998

seq1  ACCAAATGGATCTTGGCACTCTAGGTTTGGATATTCTCTGTAGTTTGATC  1050
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  ACCAAATGGATCTTGGCACTCTAGGTTTGAATA-TCTCTGTAGTTTGATC  1047

seq1  AGAGCTATAT-GTCTCTAGAACTGTTTCTA-TATGCTG-AAAAATAGACA  1097
      |||||||||| ||||||||||||||||||| ||||||| |||||||||||
seq2  AGAGCTATATGGTCTCTAGAACTGTTTCTATTATGCTGAAAAAATAGACA  1097