BAC Information

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BAC

Clone NameB6Ng01-338D07
Chromosome14 (Build37)
Map Location 110,638,956 - 110,640,067
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338D07.bB6Ng01-338D07.g
ACCGA122582GA122583
length1,2151,118
definitionB6Ng01-338D07.b B6Ng01-338D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccttttgtcaattctcgatcttacaacacaagccattgctgat
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacaataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattcctccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacaccaagatattttatattat
ttgtgactattgagaaggtattgtttccctaatttctttctcagcctgtt
tattctttgtatagaagaaaggccattgacttgtttgactttatttttta
tcagctacttcacccgaagctgttatcagtttaggagtctcctgggtaga
gtttaaggtcacttatataactatcaatcatctgcaaaagtgaatatttg
acctcccctttgcattgatccatgatcctttgttacgcaatgctctgggc
ataatacctccacag

gaattcacttttttggtaaattttcttgattttaaattattgggtattta
tgcaatagtttccttttatccaataatttattttcaattttcacaaacaa
caaagcttgcagtgtttgcatatatagtacatcactgaaaaccttacaga
taaatagaagtttttaggatatgtgcatctgttgctatactactggtgat
atacttttagtatatttaaagatgttaatgttaccagaatctaataaacc
tgtcttaatgaactaaatcttctgcttactctgacatatttaatgtcaca
tgacttaccaaaatgaagagaattatttaactcattgtatagaagtacta
caaaatttacaaatgtacttctttcatacatttgcttttattatttttgc
tagaataattgaactaataattgacctaaaaaataactccaggaaagaga
ggaaaaacaaaacaaaatcgaaaaaaaaccagatctactaaggaatagta
atgaaaatggaaatatttgtaaattgagtggacaataagtttagactgtt
tttgaatatatattatagagtaattttgacataattaatatatttatata
tacacacatattatgtatacatatatgtaatgtgattttatgcaaggttc
tagaacactaggtatggaatccctcccctaggattatatatatatatata
tatatagtgtaatatatattatattaaggtaactgccaattttaaaatag
aaataaatataagaaatttgaatataggcattgtagtgctcataaaacca
tacaaacaaataataaatgtttgcccagtgacattatagtcaagaactcc
aaggaaacaaattttagaaactgaatttttaaataaatgtctgagatgga
cataaattgtaattttagagaagttcttccaaatgacttgaatagtcaat
ggagctgatttactcccaaaggtcatagctgacacacttctgagtgaata
ctcactgtagcatctagtttaaagaaacacgagttgatttacaaattgga
gtatattttcataaactaccatctgtaggctggtgatgcaataacatcaa
cagttaaagcccacaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110638956_110640067
seq2: B6Ng01-338D07.g_64_1181

seq1  GAATTCACTTTTTTGGTAAATTTTCTTGATTTTAAATTATTGGGTATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTTTGGTAAATTTTCTTGATTTTAAATTATTGGGTATTTA  50

seq1  TGCAATAGTTTCCTTTTATCCAATAATTTATTTTCAATTTTCACAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGTTTCCTTTTATCCAATAATTTATTTTCAATTTTCACAAACAA  100

seq1  CAAAGCTTGCAGTGTTTGCATATATAGTACATCACTGAAAACCTTACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTGCAGTGTTTGCATATATAGTACATCACTGAAAACCTTACAGA  150

seq1  TAAATAGAAGTTTTTAGGATATGTGCATCTGTTGCTATACTACTGGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGAAGTTTTTAGGATATGTGCATCTGTTGCTATACTACTGGTGAT  200

seq1  ATACTTTTAGTATATTTAAAGATGTTAATGTTACCAGAATCTAATAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTAGTATATTTAAAGATGTTAATGTTACCAGAATCTAATAAACC  250

seq1  TGTCTTAATGAACTAAATCTTCTGCTTACTCTGACATATTTAATGTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAATGAACTAAATCTTCTGCTTACTCTGACATATTTAATGTCACA  300

seq1  TGACTTACCAAAATGAAGAGAATTATTTAACTCATTGTATAGAAGTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTACCAAAATGAAGAGAATTATTTAACTCATTGTATAGAAGTACTA  350

seq1  CAAAATTTACAAATGTACTTCTTTCATACATTTGCTTTTATTATTTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTACAAATGTACTTCTTTCATACATTTGCTTTTATTATTTTTGC  400

seq1  TAGAATAATTGAACTAATAATTGACCTAAAAAATAACTCCAGGAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAATTGAACTAATAATTGACCTAAAAAATAACTCCAGGAAAGAGA  450

seq1  GGAAAAACAAAACAAAATCGAAAAAAAACCAGATCTACTAAGGAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACAAAACAAAATCGAAAAAAAACCAGATCTACTAAGGAATAGTA  500

seq1  ATGAAAATGGAAATATTTGTAAATTGAGTGGACAATAAGTTTAGACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATGGAAATATTTGTAAATTGAGTGGACAATAAGTTTAGACTGTT  550

seq1  TTTGAATATATATTATAGAGTAATTTTGACATAATTAATATATTTATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATATATATTATAGAGTAATTTTGACATAATTAATATATTTATATA  600

seq1  TACACACATATTATGTATACATATATGTAATGTGATTTTATGCAAGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATATTATGTATACATATATGTAATGTGATTTTATGCAAGGTTC  650

seq1  TAGAACACTAGGTATGGAATCCCTCCCCTAGGATTATATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACTAGGTATGGAATCCCTCCCCTAGGATTATATATATATATATA  700

seq1  TATATAGTGTAATATATATTATATTAAGGTAACTGCCAATTTTAAAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTGTAATATATATTATATTAAGGTAACTGCCAATTTTAAAATAG  750

seq1  AAATAAATATAAGAAATTTGAATATAGGCATTGTAGTGCTCATAAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATAAGAAATTTGAATATAGGCATTGTAGTGCTCATAAAACCA  800

seq1  TACAAACAAATAATAAATGTTTGCCCAGTGACATTATAGTCAAGAACTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAAATAATAAATGTTTGCCCAGTGACATTATAGTCAAGAACTCC  850

seq1  AAGGAAACAAATTTTAGAAACTGAATTTTTAAATAAATGTCTGAGATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACAAATTTTAGAAACTGAATTTTTAAATAAATGTCTGAGATGGA  900

seq1  CATAAATTGTAATTTTAGAGAAGTTCTTCCAAATGACTTGAATAGTCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTGTAATTTTAGAGAAGTTCTTCCAAATGACTTGAATAGTCAAT  950

seq1  GGAGCTGATTTACTCCC-AAGGTCATAGCTGACAACACTTCTGAGTGAAT  999
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  GGAGCTGATTTACTCCCAAAGGTCATAGCTGAC-ACACTTCTGAGTGAAT  999

seq1  ACTCACTGTAGCATCTAGTTTACAG-AACACGAGTTGATTTACAAATTGG  1048
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  ACTCACTGTAGCATCTAGTTTAAAGAAACACGAGTTGATTTACAAATTGG  1049

seq1  AGTATA-TTTCATAAACTACCATCTGTAGGCT-GTGATGCCATACATTCA  1096
      |||||| ||||||||||||||||||||||||| ||||||| |||   |||
seq2  AGTATATTTTCATAAACTACCATCTGTAGGCTGGTGATGCAATAACATCA  1099

seq1  ACAGT--AAG-CCACAACC  1112
      |||||  ||| ||||||||
seq2  ACAGTTAAAGCCCACAACC  1118


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