BAC Information

Click to search

BAC

Clone NameB6Ng01-339H10
Chromosome14 (Build37)
Map Location 121,604,954 - 121,606,024
singlet/doubletsinglet
Overlap geneFarp1
Upstream geneMbnl2, Rap2a, LOC668835, LOC668837, Ranbp5, LOC100043837
Downstream geneStk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339H10.bB6Ng01-339H10.g
ACCGA123454GA123455
length931,085
definitionB6Ng01-339H10.b B6Ng01-339H10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aatatctatctatctatctatctatctatctatctatctatctatctatc
tatctatctatcttccctccctccctccctccctccctccttc
gaattctttgggaaatatgagtgcctgccagctgggcagaaaattggcga
atcctaaaacaagcagacagtgttggaagttatgaaacggactgtagtct
ttcttaaaataaagaaataaagaaaaaggaaacgctgtacggcataggaa
ttcttccacagcttcatacccccatggtccgtttttaaaagaatggtttt
ttgttaaggtgtttgaattgtgctggagttaatgaaagaaagaagattcc
aggaaaaaaaaatggcaacccataagcttaatcatgcatcttcttgcatg
ctggtgtgagaagaggagcctagaaccaaggattagtctaagcagaccca
ggtccctgtctgccagcctacctgggaaatgtccgtatgtgtacagcata
ttggaaacagcagagaacagaaccacagtggcagaaggcagggttggtga
cccgtagttcgtggtcctcttttatgtcccttcctttggataagcgtgca
tgggctcgctttatattgggcagaagggagatttctggtagtcacagctc
actcctgctgcctgtgcatgtgacccacggacacaggccagagagctgag
attatccacagaagatgtcgtacacccgcaggtagctgtggctatcttcc
agcttgctctgatggcagccatgggaccataaagcggtgtctgttagagg
aataaaagcgcagaataccccacgctgaaccatctttattggcccctgca
gccttgcaaggacaggctaatgggcacactcattgtacctgtcaggtctc
agccctcaccgtcgtttaatatcgtgagttagttggctcctgttacgtgg
gtattggagaggtaatggaaacataaaaccgggtgacttttgcctcccaa
ggttttgatgcgtgtggtagagtttgatccatcatagcagcaagacttta
ggaaggccatggagttataaaggagaaaaccaaggcattatttctaaatg
gttacctgcctccacaatcaattcccctttcctcttccacttgcgttacc
ttgggaattgaacttagttcacttgtcaggcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121604954_121606024
seq2: B6Ng01-339H10.g_64_1148

seq1  GAATTCTTTGGGAAATATGAGTGCCTGCCAGCTGGGCAGAAAATTGGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGAAATATGAGTGCCTGCCAGCTGGGCAGAAAATTGGCGA  50

seq1  ATCCTAAAACAAGCAGACAGTGTTGGAAGTTATGAAACGGACTGTAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAAACAAGCAGACAGTGTTGGAAGTTATGAAACGGACTGTAGTCT  100

seq1  TTCTTAAAATAAAGAAATAAAGAAAAAGGAAACGCTGTACGGCATAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAAATAAAGAAATAAAGAAAAAGGAAACGCTGTACGGCATAGGAA  150

seq1  TTCTTCCACAGCTTCATACCCCCATGGTCCGTTTTTAAAAGAATGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCACAGCTTCATACCCCCATGGTCCGTTTTTAAAAGAATGGTTTT  200

seq1  TTGTTAAGGTGTTTGAATTGTGCTGGAGTTAATGAAAGAAAGAAGATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGGTGTTTGAATTGTGCTGGAGTTAATGAAAGAAAGAAGATTCC  250

seq1  AGGAAAAAAAAATGGCAACCCATAAGCTTAATCATGCATCTTCTTGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAATGGCAACCCATAAGCTTAATCATGCATCTTCTTGCATG  300

seq1  CTGGTGTGAGAAGAGGAGCCTAGAACCAAGGATTAGTCTAAGCAGACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGAGAAGAGGAGCCTAGAACCAAGGATTAGTCTAAGCAGACCCA  350

seq1  GGTCCCTGTCTGCCAGCCTACCTGGGAAATGTCCGTATGTGTACAGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGTCTGCCAGCCTACCTGGGAAATGTCCGTATGTGTACAGCATA  400

seq1  TTGGAAACAGCAGAGAACAGAACCACAGTGGCAGAAGGCAGGGTTGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACAGCAGAGAACAGAACCACAGTGGCAGAAGGCAGGGTTGGTGA  450

seq1  CCCGTAGTTCGTGGTCCTCTTTTATGTCCCTTCCTTTGGATAAGCGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTAGTTCGTGGTCCTCTTTTATGTCCCTTCCTTTGGATAAGCGTGCA  500

seq1  TGGGCTCGCTTTATATTGGGCAGAAGGGAGATTTCTGGTAGTCACAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCGCTTTATATTGGGCAGAAGGGAGATTTCTGGTAGTCACAGCTC  550

seq1  ACTCCTGCTGCCTGTGCATGTGACCCACGGACACAGGCCAGAGAGCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCTGCCTGTGCATGTGACCCACGGACACAGGCCAGAGAGCTGAG  600

seq1  ATTATCCACAGAAGATGTCGTACACCCGCAGGTAGCTGTGGCTATCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCACAGAAGATGTCGTACACCCGCAGGTAGCTGTGGCTATCTTCC  650

seq1  AGCTTGCTCTGATGGCAGCCATGGGACCATAAAGCGGTGTCTGTTAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTCTGATGGCAGCCATGGGACCATAAAGCGGTGTCTGTTAGAGG  700

seq1  AATAAAAGCGCAGAATACCCCACGCTGAACCATCTTTATTGGCCCCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGCGCAGAATACCCCACGCTGAACCATCTTTATTGGCCCCTGCA  750

seq1  GCCTTGCAAGGACAGGCTAATGGGCACACTCATTGTACCTGTCAGGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCAAGGACAGGCTAATGGGCACACTCATTGTACCTGTCAGGTCTC  800

seq1  AGCCCTCACCGTCGTTTAATATCGTGAGTTAGTTGGCTCCTGTTACGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCACCGTCGTTTAATATCGTGAGTTAGTTGGCTCCTGTTACGTGG  850

seq1  GTATTGGAGAGGTAATGGAAACATAAAACC-GGTGACTTTTGCCTCCCAA  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTATTGGAGAGGTAATGGAAACATAAAACCGGGTGACTTTTGCCTCCCAA  900

seq1  GG-TTTGATGCGTGTGGTAGAGTTTGATCCATCATAGCAGCAAGACCTTA  948
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTTTTGATGCGTGTGGTAGAGTTTGATCCATCATAGCAGCAAGACTTTA  950

seq1  GGAA-GCCATGGAGTTATAAA-GAG-AAACCAAGGCA-TAATTCTAAATG  994
      |||| |||||||||||||||| ||| ||||||||||| || |||||||||
seq2  GGAAGGCCATGGAGTTATAAAGGAGAAAACCAAGGCATTATTTCTAAATG  1000

seq1  GGTTACTGC--TCAC-ATC-ATTCCC---TTCTCTTCCACCTTGTG-TAC  1036
      | |  ||||   ||| ||| ||||||   | |||||||| |||| | |||
seq2  GTTACCTGCCTCCACAATCAATTCCCCTTTCCTCTTCCA-CTTGCGTTAC  1049

seq1  C-TGGGAATTGAACTTAGGTCACTTGTCAGGCTTGG  1071
      | |||||||||||||||| |||||||||||||||||
seq2  CTTGGGAATTGAACTTAGTTCACTTGTCAGGCTTGG  1085