BAC Information

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BAC

Clone NameB6Ng01-339M01
Chromosome14 (Build37)
Map Location 8,851,539 - 8,851,943
singlet/doubletsinglet
Overlap geneAbhd6
Upstream geneLOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3
Downstream geneRpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik, LOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339M01.bB6Ng01-339M01.g
ACCGA123658GA123659
length514399
definitionB6Ng01-339M01.b B6Ng01-339M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaaccccagttctccccacttgcatatgaccttgaatgagttgttaccct
actgagcatcaattttctgttctacaaaaaggaaataatatttcattcaa
aaggctacagcttcaggtccagtttagactcagcagacagtaccaaacat
tatgtttttatcctcatccacgaggatagatgcacatgcacagttaagca
cgtgtgcacatgttcaagacacccttggatgctgttccttaatttttaag
agggggtatctggagctcactaactaggctaactggctggctagcaacct
ccaagggtccacctgtctctgcctactcagcactaggattacaagtgcac
actccacccctggcgctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgaattatgtgtgtatgtgtgaatgtgtgaagca
tgtgccagtgcctgaatgtgtgtgtgtaaatgtgatctaaatatctacta
agagacttaagcat
atacatgctaaacaagcacttcaccacagaactatatacccagaagttat
ttaaacttagatggcaaatttccatagacttagacaagttgacctgagtg
ctagtatcttttcaccattatgtttctggtgtgttaaacaaataagaaga
atgggatgaatgttggtgttgaagaggctagatggatggtggaactgtca
gaagaaactggcaggtcaggagaaacaggaagagctatatcggaggcata
gcttagtgtcaaggaggcattagaaaaatctagaaggaaatcctggcaag
tatgttgatatttataatttcctataattgagagtggtagagaatggctg
tgtggggagagtcaggagtgtatcatgggagtgatggggagagaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8851539_8851943
seq2: B6Ng01-339M01.g_66_470

seq1  GAATTCATACATGCTAAACAAGCACTTCACCACAGAACTATATACCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACATGCTAAACAAGCACTTCACCACAGAACTATATACCCAGA  50

seq1  AGTTATTTAAACTTAGATGGCAAATTTCCATAGACTTAGACAAGTTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTAAACTTAGATGGCAAATTTCCATAGACTTAGACAAGTTGACC  100

seq1  TGAGTGCTAGTATCTTTTCACCATTATGTTTCTGGTGTGTTAAACAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTAGTATCTTTTCACCATTATGTTTCTGGTGTGTTAAACAAATA  150

seq1  AGAAGAATGGGATGAATGTTGGTGTTGAAGAGGCTAGATGGATGGTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATGGGATGAATGTTGGTGTTGAAGAGGCTAGATGGATGGTGGAA  200

seq1  CTGTCAGAAGAAACTGGCAGGTCAGGAGAAACAGGAAGAGCTATATCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAAGAAACTGGCAGGTCAGGAGAAACAGGAAGAGCTATATCGGA  250

seq1  GGCATAGCTTAGTGTCAAGGAGGCATTAGAAAAATCTAGAAGGAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGCTTAGTGTCAAGGAGGCATTAGAAAAATCTAGAAGGAAATCCT  300

seq1  GGCAAGTATGTTGATATTTATAATTTCCTATAATTGAGAGTGGTAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTATGTTGATATTTATAATTTCCTATAATTGAGAGTGGTAGAGAA  350

seq1  TGGCTGTGTGGGGAGAGTCAGGAGTGTATCATGGGAGTGATGGGGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGGGGAGAGTCAGGAGTGTATCATGGGAGTGATGGGGAGAGA  400

seq1  GGAGA  405
      |||||
seq2  GGAGA  405