BAC Information

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BAC

Clone NameB6Ng01-340D10
Chromosome14 (Build37)
Map Location 67,136,615 - 67,271,280
singlet/doubletdoublet
Overlap geneAdra1a
Upstream geneElp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4
Downstream geneENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340D10.bB6Ng01-340D10.g
ACCGA123986GA123987
length1,0141,167
definitionB6Ng01-340D10.b B6Ng01-340D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,270,746 - 67,271,280)(67,136,615 - 67,137,797)
sequence
gaattcacaaaactgataaagatctagtctcgggcacaaataactctgaa
acctcagcaaggagcggcaaacaacccaacttaaagtgggcaagtgactc
aagcaggtagacacgactccagagctgatagacaaaggcaccatgagcgt
agaggaagcctgggacatcatgaatcatgaggaaatgcagcgcatctgag
taccactgcacacagtgtccacggctgtaaccatcagtcaagagaagaag
tggtggctgtgttaggaagagtggggccttgtgcgtcgcgtcgggtggcc
gcagaaactggggcagctgctgtgggaaactgtttggcagaccctctgca
aactaaacatagaagtctcagatgattcagcaattccacttctgattatg
gatccaaatggactgcggcagacattcaaaggctggtacatgaatattca
tcttggcaaatactcaaaactggctcgagggtagaaagcatttgactgcc
cagcagtggatgggcagctcagccagatactgtatatccacacacacaaa
atgaaatgttagcctgtcatgaaggacaagtatcacagcatgggtgactt
ttagaagagcaggttatgggaggacatatggaaggccacacattgtgtga
ttccttatggacgcagtcctaaggacagggcaatcataccgatgaaggag
gatggatggctgccaggagcaagagaggaatcattgctaatggatacagt
ttcatgtggcggagatggagaagagctcgttagtggtggcggctgcatag
cactgtcagccttttctcaagagctgctgaactgacactttcaagtggtt
aaaacagcaaatcgtatgtcatgtgaatggtcacaattaaaaacacacac
acacatacacacatatacacacacatacacacacatacatacacacacac
atacatacacacacacacatacacacatacacacacacatacacacatgc
acacatacacacac
gaattcaataacatgaacaacccattatttgtgctgttcttggaaaaatt
cggaccctcaaaaagaactaatttaggaatgaaagcagtctttgaataca
cggaatatttagatacctcaaaaactatcggtgctccgactgcctggttt
gacatggccgtggacattatcatatcagaggcttctacatcaggactggg
aagctctgcttgaaacaaaaaatacagatgcaatcattgtgtttctttag
gcaaaatctacttgagtagaggcagatagcaggagctagtgtcttcccaa
tacatcccaatagggctggccatctagaaagctcctaggagggcggacaa
gatactcctgggaaaaggcacttgctgtcaagtctgacaacctgactttg
ctcgttggaacccacaggttggaaggagaaaactcagtttaggaagctat
tctctgagtccacatgtggacagaagcatagaggcatgagcacgcacaca
cacacacacacacacacacacacacacacacacacacacacgcgcgcgcg
cataaaatcaatcaatgcaattgcatttataacccattatgaactcattg
atagactgaggcatgcataaagctatgagaataatgtctcctacataatg
tatgttaaatcaaaggtagcaaatctgcaaatgacaaacaatttacatct
ttatattagttttggttttgctttcatattttctgtgttctgggcatcta
actcagaactctacctctgaggtataccatccagccttgaatttttcatc
atcagtaaaataatcccacacataggtagattacataatataatgtatcc
tttctaccaatacttcacctctgtgagttacacatctgtaagctatagat
gaaaataattgccacacactgagtgcaaagattattctctactattaaca
ttctttgttagagcaccacaaattaatgccaatgacaggaaactactaag
tagatcaaagttatcccattaaaaattattttaacagaatatttataatg
caagcatcactgtgtcatctaaataaacaaaaatacatatacataccaac
atttcatgttctttagatagcatattttatgtgatttattgaggcctgga
agggtcctctgcagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67270746_67271280
seq2: B6Ng01-340D10.b_44_578 (reverse)

seq1  ATACAGTATCTGGCTGAGCTGCCCATCCACTGCTGGGCAGTCAAATGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTATCTGGCTGAGCTGCCCATCCACTGCTGGGCAGTCAAATGCTT  50

seq1  TCTACCCTCGAGCCAGTTTTGAGTATTTGCCAAGATGAATATTCATGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCGAGCCAGTTTTGAGTATTTGCCAAGATGAATATTCATGTAC  100

seq1  CAGCCTTTGAATGTCTGCCGCAGTCCATTTGGATCCATAATCAGAAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGAATGTCTGCCGCAGTCCATTTGGATCCATAATCAGAAGTGG  150

seq1  AATTGCTGAATCATCTGAGACTTCTATGTTTAGTTTGCAGAGGGTCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTGAATCATCTGAGACTTCTATGTTTAGTTTGCAGAGGGTCTGCC  200

seq1  AAACAGTTTCCCACAGCAGCTGCCCCAGTTTCTGCGGCCACCCGACGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTTCCCACAGCAGCTGCCCCAGTTTCTGCGGCCACCCGACGCGA  250

seq1  CGCACAAGGCCCCACTCTTCCTAACACAGCCACCACTTCTTCTCTTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAAGGCCCCACTCTTCCTAACACAGCCACCACTTCTTCTCTTGACT  300

seq1  GATGGTTACAGCCGTGGACACTGTGTGCAGTGGTACTCAGATGCGCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTACAGCCGTGGACACTGTGTGCAGTGGTACTCAGATGCGCTGCA  350

seq1  TTTCCTCATGATTCATGATGTCCCAGGCTTCCTCTACGCTCATGGTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATGATTCATGATGTCCCAGGCTTCCTCTACGCTCATGGTGCCT  400

seq1  TTGTCTATCAGCTCTGGAGTCGTGTCTACCTGCTTGAGTCACTTGCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTATCAGCTCTGGAGTCGTGTCTACCTGCTTGAGTCACTTGCCCAC  450

seq1  TTTAAGTTGGGTTGTTTGCCGCTCCTTGCTGAGGTTTCAGAGTTATTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTGGGTTGTTTGCCGCTCCTTGCTGAGGTTTCAGAGTTATTTGT  500

seq1  GCCCGAGACTAGATCTTTATCAGTTTTGTGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  GCCCGAGACTAGATCTTTATCAGTTTTGTGAATTC  535

seq1: chr14_67136615_67137797
seq2: B6Ng01-340D10.g_67_1233

seq1  GAATTCAATAACATGAACAACCCATTATTTGTGCTGTTCTTGGAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAACATGAACAACCCATTATTTGTGCTGTTCTTGGAAAAATT  50

seq1  CGGACCCTCAAAAAGAACTAATTTAGGAATGAAAGCAGTCTTTGAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCCTCAAAAAGAACTAATTTAGGAATGAAAGCAGTCTTTGAATACA  100

seq1  CGGAATATTTAGATACCTCAAAAACTATCGGTGCTCCGACTGCCTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATATTTAGATACCTCAAAAACTATCGGTGCTCCGACTGCCTGGTTT  150

seq1  GACATGGCCGTGGACATTATCATATCAGAGGCTTCTACATCAGGACTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCCGTGGACATTATCATATCAGAGGCTTCTACATCAGGACTGGG  200

seq1  AAGCTCTGCTTGAAACAAAAAATACAGATGCAATCATTGTGTTTCTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGCTTGAAACAAAAAATACAGATGCAATCATTGTGTTTCTTTAG  250

seq1  GCAAAATCTACTTGAGTAGAGGCAGATAGCAGGAGCTAGTGTCTTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCTACTTGAGTAGAGGCAGATAGCAGGAGCTAGTGTCTTCCCAA  300

seq1  TACATCCCAATAGGGCTGGCCATCTAGAAAGCTCCTAGGAGGGCGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCCAATAGGGCTGGCCATCTAGAAAGCTCCTAGGAGGGCGGACAA  350

seq1  GATACTCCTGGGAAAAGGCACTTGCTGTCAAGTCTGACAACCTGACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCTGGGAAAAGGCACTTGCTGTCAAGTCTGACAACCTGACTTTG  400

seq1  CTCGTTGGAACCCACAGGTTGGAAGGAGAAAACTCAGTTTAGGAAGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTGGAACCCACAGGTTGGAAGGAGAAAACTCAGTTTAGGAAGCTAT  450

seq1  TCTCTGAGTCCACATGTGGACAGAAGCATAGAGGCATGAGCACGCACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGTCCACATGTGGACAGAAGCATAGAGGCATGAGCACGCACACA  500

seq1  CACACACACACACACACACACACACACACACACACACACACGCGCGCGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACGCGCGCGCG  550

seq1  CATAAAATCAATCAATGCAATTGCATTTATAACCCATTATGAACTCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATCAATCAATGCAATTGCATTTATAACCCATTATGAACTCATTG  600

seq1  ATAGACTGAGGCATGCATAAAGCTATGAGAATAATGTCTCCTACATAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGAGGCATGCATAAAGCTATGAGAATAATGTCTCCTACATAATG  650

seq1  TATGTTAAATCAAAGGTAGCAAATCTGCAAATGACAAACAATTTACATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAATCAAAGGTAGCAAATCTGCAAATGACAAACAATTTACATCT  700

seq1  TTATATTAGTTTTGGTTTTGCTTTCATATTTTCTGTGTTCTGGGCATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAGTTTTGGTTTTGCTTTCATATTTTCTGTGTTCTGGGCATCTA  750

seq1  ACTCAGAACTCTACCTCTGAGGTATACCATCCAGCCTTGAATTTTTCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAACTCTACCTCTGAGGTATACCATCCAGCCTTGAATTTTTCATC  800

seq1  ATCAGTAAAATAATCCCACACATAGGTAGATTACATAATATAATGTATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAAATAATCCCACACATAGGTAGATTACATAATATAATGTATCC  850

seq1  TTTCTACCAATACTTCACCTCTGTGAGTTACACATCTGTAAGCTATAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCAATACTTCACCTCTGTGAGTTACACATCTGTAAGCTATAGAT  900

seq1  GAAAATAATTGCCACACACTGAGTGCAAAGATTATTCTCTACTATTAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATTGCCACACACTGAGTGCAAAGATTATTCTCTACTATTAACA  950

seq1  TTCTTTGTTAGAGCA-CACAAATTAATGCCCAATGACAGGAAACTACTAA  999
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TTCTTTGTTAGAGCACCACAAATTAATG-CCAATGACAGGAAACTACTAA  999

seq1  GTAGATCAAAG-TATCCCATTAAAAATTAATTTTAACAGAATATTTAATA  1048
      ||||||||||| |||||||||||||||| ||||||||||||||||| |||
seq2  GTAGATCAAAGTTATCCCATTAAAAATT-ATTTTAACAGAATATTT-ATA  1047

seq1  ATGCAAAGCAATCACTGTGTCATTCTAAATTAAAACAAAAATTACAAATA  1098
      |||| |||| |||||||||||| |||||||  ||||||||| |||| |||
seq2  ATGC-AAGC-ATCACTGTGTCA-TCTAAAT--AAACAAAAA-TACATATA  1091

seq1  ATAACAATACAAAACAATTTCATG-TCTTTAGATAGCATATTTTTATGTG  1147
            |||| ||   |||||||| ||||||||||||||| |||||||||
seq2  -----CATACCAA--CATTTCATGTTCTTTAGATAGCATA-TTTTATGTG  1133

seq1  ATTTATTGAGGGGCTGGAGAGGTGCCTCTGCAGTTA  1183
      ||||||||| || ||||| |||  ||||||||||||
seq2  ATTTATTGA-GGCCTGGA-AGGGTCCTCTGCAGTTA  1167