MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-341J08
Chromosome	14 (Build37)
Map Location	18,244,961 - 18,245,770
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Top2b, Rarb, Tpi-rs9
Downstream gene	Thrb, LOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Top2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21974 MGI:98791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rarb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218772 MGI:97857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpi-rs9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271171 MGI:98807
definition	gene_synonym : Tpi-9 note : triosephosphate isomerase related sequence 9 pseudo : _no_value

name	Thrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21834 MGI:98743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627608 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	Nr1d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353187 MGI:2449205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC632287 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:632287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins pseudo : _no_value

name	Rpl15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66480 MGI:1913730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkiras1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69721 MGI:1916971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22194 MGI:107411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Top2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328147 GeneID:21974 MGI:98791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : topoisomerase (DNA) II beta transcript_id : NM_009409.2

name	Rarb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45593123 GeneID:218772 MGI:97857
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoic acid receptor, beta transcript_id : NM_011243.1

name	Thrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130406 GeneID:21834 MGI:98743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor beta transcript_id : NM_009380.2

name	Nr1d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367557 GeneID:353187 MGI:2449205
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 1, group D, member 2 transcript_id : NM_011584.3

name	Rpl15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485552 GeneID:66480 MGI:1913730
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L15 transcript_id : NM_025586.3

name	Nkiras1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872198 GeneID:69721 MGI:1916971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NFKB inhibitor interacting Ras-like protein 1 transcript_id : NM_023526.3

name	Ube2e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365631 GeneID:22194 MGI:107411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2E 1, UBC4/5 homolog (yeast) transcript_id : NM_009455.3

name	Top2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328148 CCDS:CCDS26833.1 GeneID:21974 MGI:98791
definition	GO_component : GO:0005694 - chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP] codon_start : 1 product : topoisomerase (DNA) II beta protein_id : NP_033435.2

name	Rarb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45593124 CCDS:CCDS26834.1 GeneID:218772 MGI:97857
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0048048 - embryonic eye morphogenesis [Evidence IGI]; GO:0043065 - positive regulation of apoptosis [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IMP] codon_start : 1 note : RAR beta 2; RARbeta1/beta3; retinoic acid receptor beta 1/ beta 3 product : retinoic acid receptor, beta protein_id : NP_035373.1

name	Thrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678343 CCDS:CCDS26835.1 GeneID:21834 MGI:98743
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0004887 - thyroid hormone receptor activity [Evidence TAS]; GO:0003700 - transcription factor activity [Evidence TAS]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0008016 - regulation of heart contraction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0007605 - sensory perception of sound [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : TR beta product : thyroid hormone receptor beta protein_id : NP_033406.1

name	Nr1d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543338 GeneID:353187 MGI:2449205
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0004887 - thyroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Rev-erb beta product : nuclear receptor subfamily 1, group D, member 2 protein_id : NP_035714.2

name	Rpl15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385036 CCDS:CCDS22925.1 GeneID:66480 MGI:1913730
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L15 protein_id : NP_079862.1

name	Nkiras1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541888 CCDS:CCDS26836.1 GeneID:69721 MGI:1916971
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : I-kappa-B-interacting Ras-like protein 1 product : kappaB-Ras1 protein protein_id : NP_076015.2

name	Ube2e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678479 CCDS:CCDS26837.1 GeneID:22194 MGI:107411
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004840 - ubiquitin conjugating enzyme activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : ubiquitin-conjugating enzyme 5 product : ubiquitin-conjugating enzyme E2E 1, UBC4/5 homolog protein_id : NP_033481.1

name	LOC627608 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627608
definition	number : 1 pseudo : _no_value

name	LOC632287 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265169 GeneID:632287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins product : similar to pleckstrin homology domain containing, family F (with FYVE domain) member 1 pseudo : _no_value transcript_id : XR_033982.1

clone name	MSMg01-139A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231O22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-145A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261A08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-305I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-323D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-341J08.b	B6Ng01-341J08.g
ACC	GA124924	GA124925
length	996	994
definition	B6Ng01-341J08.b	B6Ng01-341J08.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctccccacccctattccccctctcctttgcctatgagagggtgct ttatttttaaaccttttaattttcttaaggaggcccacttatgacaggtg aaaattacatggcatttagactttagcatctgtgggcaagcttcctcagt aaacagcctccatgctatgttaatagtctacatgttgtataacctccctc ttagctttattcttccacttaacccaagctagggtcacctgagaatggat ttcccagagcacatttgcctataggcatatctatgggggagggggttgtc ttgattgtttatcatgttggaaggcccagcctattgacagcaacatcata tccagaaaggccccatgttgtggtaatttcttacccccaaataagcctgt ataaaacacacaaaaccagttgttatatttataaggtaaatgcctagatt gggcagatctatcactatactaatttattccccagctatgagaccccttg ctccttatggcttctctaggccatgtggttatgctccatttttctctgtc tcttctttctccatttctctctctcctcccctctctgagtcctccagtct cacctttcccttctattgcccaatcattggctctagcctttatttgacca gtcagactgaagagaaggttcagttgagatcacctgagtatgtgatctag ccttcatctgggcagcccctcttgaggaagcagaattaacttcaaaataa aaacagcaccagggcaaccaaaaaactttccctccttctgtccaattaaa atgctctttctctcagatatagattgagtacaatcttgacaatttatcaa tggttcaaatatattatacacttaacatccaggtctattcgtacttgtca attagattaagggctctaccatctatcctacctaaagaattaacaattct atacctggaatacattctgattagtttgcttaccatctaaaatcat	gaattccagtctagacagggctggtgaggccatgtatcaagaattaatta actaaaacccagtagctaagctccttactggccaatggatgcttcacaca tttttttttttcttcagctccatcctagtctgggctctgtcttcgcactg gaagcatttccattggtttgtgcatcagttcaaagtctggggatgctccc acagtgttactctaaattttacatgtgttttatagagtagagcatattct tggctataggtgcctttcttcttaaacactgtccataattatttgagctt atgttgaagaggttgttgtgccacggaaatgttcgtgatcccccaaaaca cataggagccattctgatgctcacagcaatgtctttattctattccagct agctcagactccctcaatgcaccaccatcatgcaggatgggtttggtggt ggagaagacgcaaaggtctacggggcaaggctttctagtaatcaggaaac agggaatatgcgtgcaagcatctaattagaaagctgctgtggcctttaac ataactggctggttctgggagtcatatcataaacttaacttctgctcccc tctgctttggtggtcattattcaaggggtgggcttgtaacctggagtgca ggtttgttgggggccaagagacactggtcttgttggtggtgtaacctaga aaatctgcttttgttgaggattagcttagatactggagctaggctcagct tttgttggtggcaattttggaaactaatgctagataccaacctgttagtc tacctgagttcaaagttaggtcaggtttcttttaaagtggagtctgaatt taaaagcttttggcatctcaagggaactttattaccagaccctctttccc tcctggaaacaaatggttcataaagaacataggcaccccttcccctctgg aagggaagggctaattacatttcctcagaacacagggaggaggg
quality values	Open. Hide. 58 26 33 31 58 54 47 49 58 58 41 30 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 51 56 38 38 32 38 44 51 56 62 62 59 62 62 62 46 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 59 59 59 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 49 62 62 62 62 62 62 45 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 43 62 59 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 56 62 54 62 62 62 62 51 62 56 56 56 56 56 47 62 51 56 56 62 62 47 62 62 62 62 62 62 62 62 62 56 47 47 56 62 56 47 62 62 62 62 62 51 56 56 56 56 47 47 54 62 54 42 62 56 56 56 56 56 56 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 54 62 62 62 62 62 62 52 48 52 62 54 62 62 54 52 54 45 54 52 47 42 54 58 58 54 54 58 58 37 45 52 52 42 51 52 58 37 54 37 39 54 54 54 42 52 54 58 36 41 54 52 52 46 48 47 42 38 54 42 52 54 54 54 52 52 47 52 52 42 34 54 52 33 58 23 54 58 46 37 18 38 25 52 42 17 45 30 47 41 39 25 18 7 26 50 30 33 26 38 40 50 49 52 50 36 8 38 31 34 46 33 46 53 39 41 41 40 21 21 45 33 58 42 40 40 50 37 50 50 35 33 46 29 25 37 31 22 37 40 49 31 46 49 28 13 32 39 31 39 37 17 25 29 25 25 15 30 26 40 51 39 18 48 58 33 46 31 50 54 50 29 21 19 23 26 13 12 19 24 26 18 22 14 31 41 42 40 22 18 26 26 18 7 12 9 27 18 25 52 32 19 32 26 16 25 50 28 53 34 53 39 27 23 25 27 9 30 31 29 22 28 21 31 54 49 44 35 41 28 39 30 53 32 11 44 26 18 17 31 17 32 16 31 37 39 39 29 23 31 20 29 33 11 10 5 11 6 13 10 35 20 39 13 13 22 23 27 27 29 33 54 7 15 33 39 54 28 19 14 9 20 28 20 33 41 21 15 27 33 32 46 39 35 34 21 15 31 21 18 17 13 39 31 16 26 10 15 13 10 6 23 13 29 45 42 23 31 32 8 41 15 15 21 20 8 8 13 39 31 46 46 29 37 36 34 16 40 18 21 18 12 16 20 29 15 21 9 27 6 16 18 13 26 25 8 12 23 15 34 13 12 31 7 9 14 7 28 26 12 9 11 32 31 9 22 31 31 9 10 12 31 38 34 19 24 19 32 34 46 21 26 22 10 30 17 31 7 9 27 12 31 9 14 8 32 27 29 31 41 37 11 35 11 14	Open. Hide. 62 49 39 47 62 62 47 26 62 42 51 50 23 22 29 38 20 34 62 62 59 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 54 62 62 59 56 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 48 56 59 49 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 50 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 54 62 62 62 62 62 50 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 46 49 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 62 62 56 62 43 56 62 62 56 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 54 52 62 62 62 62 48 52 62 62 62 62 45 47 52 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 52 58 58 58 54 54 58 58 58 58 54 58 58 58 58 58 54 54 54 47 58 54 58 52 52 58 52 54 54 58 58 54 58 58 58 54 58 58 49 39 58 58 54 58 58 52 39 30 58 54 54 51 42 38 46 52 54 58 58 58 54 58 52 54 58 54 58 54 58 58 58 54 42 58 52 50 44 39 43 48 58 42 58 58 50 58 58 33 51 58 37 51 39 42 51 52 38 58 46 25 47 48 58 49 49 50 58 48 41 30 53 54 58 39 46 41 33 46 43 51 43 49 46 50 54 37 41 48 50 54 58 41 51 46 58 50 42 43 43 44 46 37 11 30 39 58 31 33 32 27 15 24 24 29 37 49 39 28 51 32 53 53 41 39 26 13 28 41 32 40 52 22 42 21 39 14 44 58 58 37 30 39 42 41 37 32 58 58 31 39 16 22 35 33 16 53 32 11 28 50 24 53 53 51 52 29 54 35 32 40 35 54 21 51 21 44 37 34 18 32 28 26 31 22 7 28 33 54 54 32 53 24 19 28 25 17 27 27 24 16 46 25 44 47 31 54 33 51 54 7 14 31 22 31 29 47 35 43 33 23 51 28 17 14 27 31 32 31 35 13 23 51 29 27 12 16 32 32 30 25 25 31 25 41 12 27 34 43 36 24 27 24 23 21 12 33 28 30 32 33 9 27 8 52 8 12 13 6 5 9 9 12 21 20 20 31 30 42 29 21 31 12 18 28 32 33 45 37 37 42 45 39 22 25 16 48 33 9 9 23 23 30 19 12 33 31 28 18 8 30 29 29 33 15 13 33 15 12 7 9 9 22 23 16 21 32 14 46 32 10 37 13 27 30 31 22 11 6 5 16 12 31 17 20 41 30 21 19 46 35 10 16 28 7 7 19 8 27 20 31 20 19 31 33 19 23 25 31 16 17 11 11 13 37 31 27 14 11 31 28 31 12 10 14 29 20 38 29 26 17 46 23 21 11 18 31 19 6 19 27 26 22 32 24 19 10 31 31 24 33 6 18 9 8 6 11 21 14 8 9 25 13 33 18 35 18 25 30 13 22 20

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_18244961_18245770
seq2: B6Ng01-341J08.g_68_878

seq1  GAATTCCAGTCTAGACAGGGCTGGTGAGGCCATGTATCAAGAATTAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCTAGACAGGGCTGGTGAGGCCATGTATCAAGAATTAATTA  50

seq1  ACTAAAACCCAGTAGCTAAGCTCCTTACTGGCCAATGGATGCTTCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACCCAGTAGCTAAGCTCCTTACTGGCCAATGGATGCTTCACACA  100

seq1  TTTTTTTTTTTCTTCAGCTCCATCCTAGTCTGGGCTCTGTCTTCGCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTCTTCAGCTCCATCCTAGTCTGGGCTCTGTCTTCGCACTG  150

seq1  GAAGCATTTCCATTGGTTTGTGCATCAGTTCAAAGTCTGGGGATGCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATTTCCATTGGTTTGTGCATCAGTTCAAAGTCTGGGGATGCTCCC  200

seq1  ACAGTGTTACTCTAAATTTTACATGTGTTTTATAGAGTAGAGCATATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTACTCTAAATTTTACATGTGTTTTATAGAGTAGAGCATATTCT  250

seq1  TGGCTATAGGTGCCTTTCTTCTTAAACACTGTCCATAATTATTTGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATAGGTGCCTTTCTTCTTAAACACTGTCCATAATTATTTGAGCTT  300

seq1  ATGTTGAAGAGGTTGTTGTGCCACGGAAATGTTCGTGATCCCCCAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAGAGGTTGTTGTGCCACGGAAATGTTCGTGATCCCCCAAAACA  350

seq1  CATAGGAGCCATTCTGATGCTCACAGCAATGTCTTTATTCTATTCCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAGCCATTCTGATGCTCACAGCAATGTCTTTATTCTATTCCAGCT  400

seq1  AGCTCAGACTCCCTCAATGCACCACCATCATGCAGGATGGGTTTGGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGACTCCCTCAATGCACCACCATCATGCAGGATGGGTTTGGTGGT  450

seq1  GGAGAAGACGCAAAGGTCTACGGGGCAAGGCTTTCTAGTAATCAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGACGCAAAGGTCTACGGGGCAAGGCTTTCTAGTAATCAGGAAAC  500

seq1  AGGGAATATGCGTGCAAGCATCTAATTAGAAAGCTGCTGTGGCCTTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATATGCGTGCAAGCATCTAATTAGAAAGCTGCTGTGGCCTTTAAC  550

seq1  ATAACTGGCTGGTTCTGGGAGTCATATCATAAACTTAACTTCTGCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGGCTGGTTCTGGGAGTCATATCATAAACTTAACTTCTGCTCCCC  600

seq1  TCTGCTTTGGTGGTCATTATTCAAGGGGTGGGCTTGTAACCTGGAGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTGGTGGTCATTATTCAAGGGGTGGGCTTGTAACCTGGAGTGCA  650

seq1  GGTTTGTTGGGGGCCAAGAGACACTGGTCTTGTTGGTGGTGTAACCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTGGGGGCCAAGAGACACTGGTCTTGTTGGTGGTGTAACCTAGA  700

seq1  AAATCTGCTTTTGTTGAGGATTAGCTTAGATACTGGAGCTAGGCTCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCTTTTGTTGAGGATTAGCTTAGATACTGGAGCTAGGCTCAGCT  750

seq1  TTTGTTGGTGGCAA-TTTGGAAACTAATGCTAGATACCAACCTGTTAGTC  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTGGCAATTTTGGAAACTAATGCTAGATACCAACCTGTTAGTC  800

seq1  TACCTGAGTTC  810
      |||||||||||
seq2  TACCTGAGTTC  811

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information