BAC Information

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BAC

Clone NameB6Ng01-342C02
Chromosome14 (Build37)
Map Location 14,837,133 - 14,838,291
singlet/doubletsinglet
Overlap genenone
Upstream geneEG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7
Downstream geneAtxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342C02.bB6Ng01-342C02.g
ACCGA125308GA125309
length1,2181,135
definitionB6Ng01-342C02.b B6Ng01-342C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataatacaagcaatatacagcaaacca
atacccaatatcaaactaaatgaagagaaacttgaagcaatcccactaaa
atgaaggaatagacaaggctgcccactttctccctacctatgcaatatag
tacttgaagttctatacagagcaattcgacaacaaaagaacatcatgggg
aattggaaaagaataggtcaaaatatcactatttgcagatgatatgttag
tatatataagtgatcccaaaattttaccagagaactcctaaacctgataa
acagcttcagtgcagtagcctggtataaaattaactcaaataaatcaatg
gccttcctctacacaaaggataaatgaactgagaaagaaattagggaaac
aacacccttcacaatagtcacaaataatataaaataccttggtgtgactc
taactaaggaagtgaaagatctgtatgataagaacttcaagtctctgaag
aaagaaattgaagatctcagaagatgagaagatctcccgtgctcatggat
tggcaggattaatatagtaaaaatggatatcctaccaaaagcaatctaca
gattcaatgaaattcccatcaaaattccaactcaattcttcaacgaatta
gaaagagcaatctgcaaaatcatctggaataacaaaaaacctaggatagc
aaaaactcttctcaaggctaaaagagcctctggtggaatcaccatacctg
acctaaagctttactacagagcaaatgggataaaaactacacagtactgg
tatagtgacagataagtagatcaatgagatagaattgaagacccagaaat
gaatccacacatctatggtcacttgatctttgacaagggagctaaaacca
tccagtggaaaaaagacagcattttcaacaaatggtgctggcaaattggc
ggttatcatgtataagaatgtgcattaatccattcctatctccttgtact
aaggtcaagtctagtggctcaaagaattccacataggacagagaaactga
aatatacaggagaagtaagtaaaagctggagatatggtacagggaaattt
ctaacgaacagcaggctgtgtattgtagatcagaatggaaatggaaccct
cataacttgcaagctctgtaagccaagaccctcatagaccaaaggcccct
acagattggtaaagatat
gaattcactttatcaaactgtaatgtgtaaactggtgcctaagctggctg
gagctgaactcttgaaaacaaacagtctaggtttgttagtatgagatgga
taaaatagcacagatatttcttccccctttccttaccaaagttcagttgt
tagccacgccatcagaaacatggcaccctgtctctctactttctcctata
ccttgatctagtgagggttttattgcttctgaaaacacaaacttaaacaa
aactttcattcccctttctcccttaaagtagcaaatttctccttagtagg
agtaagagaacagcagattttcaagtttgggttactgttcactggcacat
gtttgaagaactattcatcactatggttccctgttttcctcttctggtaa
gtgtgagcacacacatacacatcatacatacatacatacatacatacaca
cacacacacacacacacacacacacacacacacattctcatataaaaagt
gaggccatgggccagatttggaagggttcacctttaatcccagcactcag
gagggggaggcgagtggatctctatgaattccaagacacccagggctaca
tagtgagaccctggagagaggagaggagaggaaagagagagacgaagaga
gaggaaaggggagaaaagggaaagcaagaagagaaaggtctggagaggag
aagaggaagagaataaacctcgagagcactaacaatccaaattctttccc
agttccacggatccctaaccttgctggccagaaacacagcttacactcct
atgtccactccgttgtaaatgttttcatcatagcggagagcaaagattca
gaccttcctatttttcttttttttgttttttaactattgttcggcaattc
taagactataagtcagggaccattggcagggagcaaagactataaggagc
tttttatttccttaagtgtttgaagacatatccttggtatatttaattat
atgaataccttgattggggaggcctctgaatcctttaagtattttatact
atatcactagatataataacaaactgtatatctcataggtttgacttatt
atgcatgacatgctctacgagtctgcaactttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14837133_14838291
seq2: B6Ng01-342C02.g_66_1200 (reverse)

seq1  AAAAAAGTTACAGGACTTCTGTAGAGCATGTCATACATTAAATAAGTTCA  50
      ||||||||| || ||||   |||||||||||||| |||  |||||| |||
seq2  AAAAAAGTTGCA-GACT--CGTAGAGCATGTCATGCAT--AATAAG-TCA  44

seq1  AAACTTAATGAAGATATTACAGTTTTGGTAATTATTAATCTTATTTTATT  100
      || ||  ||| ||||| ||||||||  || |||||  ||||  |  ||| 
seq2  AACCT--ATG-AGATA-TACAGTTT--GTTATTAT--ATCTAGTGATAT-  85

seq1  ATATTTATAAAATACTTAAAGGA-TCAGAGGCCTCCCAAATCAAGGTATC  149
           |||||||||||||||||| ||||||||||||| ||||||||||| 
seq2  ---AGTATAAAATACTTAAAGGATTCAGAGGCCTCCCCAATCAAGGTATT  132

seq1  ATTATAATT-AATATACCAAGGATATTGTCTTCAAACACTTTAAGGAAAT  198
        ||||||| ||||||||||||||| ||||||||||||| ||||||||||
seq2  CATATAATTAAATATACCAAGGATA-TGTCTTCAAACAC-TTAAGGAAAT  180

seq1  AAAAGCTTCCTTATAGTCTTTGCTCCCTGCCAATGGTCCCTGACTTATAG  248
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTCCTTATAGTCTTTGCTCCCTGCCAATGGTCCCTGACTTATAG  230

seq1  TCTTAGAATTGCCGAACAATAGTTAAAAAAAAAAAAAAAAAAAAAGAAAA  298
      ||||||||||||||||||||||||      |||||| |||||||||||||
seq2  TCTTAGAATTGCCGAACAATAGTT------AAAAAACAAAAAAAAGAAAA  274

seq1  ATAGGAAGGTCTGAATCTTTGCTCTCCGCTATGATGAAAACATTTACAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGGTCTGAATCTTTGCTCTCCGCTATGATGAAAACATTTACAAC  324

seq1  GGAGTGGACATAGGAGTGTAAGCTGTGTTTCTGGCCAGCAAGGTTAGGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGACATAGGAGTGTAAGCTGTGTTTCTGGCCAGCAAGGTTAGGGA  374

seq1  TCCGTGGAACTGGGAAAGAATTTGGATTGTTAGTGCTCTCGAGGTTTATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGAACTGGGAAAGAATTTGGATTGTTAGTGCTCTCGAGGTTTATT  424

seq1  CTCTTCCTCTTCTCCTCTCCAGACCTTTCTCTTCTTGCTTTCCCTTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCTTCTCCTCTCCAGACCTTTCTCTTCTTGCTTTCCCTTTTCT  474

seq1  CCCCTTTCCTCTCTCTTCGTCTCTCTCTTTCCTCTCCTCTCCTCTCTCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCCTCTCTCTTCGTCTCTCTCTTTCCTCTCCTCTCCTCTCTCCA  524

seq1  GGGTCTCACTATGTAGCCCTGGGTGTCTTGGAATTCATAGAGATCCACTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCACTATGTAGCCCTGGGTGTCTTGGAATTCATAGAGATCCACTC  574

seq1  GCCTCCCCCTCCTGAGTGCTGGGATTAAAGGTGAACCCTTCCAAATCTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCCCTCCTGAGTGCTGGGATTAAAGGTGAACCCTTCCAAATCTGG  624

seq1  CCCATGGCCTCACTTTTTATATGAGAATGTGTGTGTGTGTGTGTGTGTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGCCTCACTTTTTATATGAGAATGTGTGTGTGTGTGTGTGTGTGT  674

seq1  GTGTGTGTGTGTGTGTATGTATGTATGTATGTATGTATGATGTGTATGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTATGTATGTATGTATGTATGTATGATGTGTATGTG  724

seq1  TGTGCTCACACTTACCAGAAGAGGAAAACAGGGAACCATAGTGATGAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCACACTTACCAGAAGAGGAAAACAGGGAACCATAGTGATGAATA  774

seq1  GTTCTTCAAACATGTGCCAGTGAACAGTAACCCAAACTTGAAAATCTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCAAACATGTGCCAGTGAACAGTAACCCAAACTTGAAAATCTGCT  824

seq1  GTTCTCTTACTCCTACTAAGGAGAAATTTGCTACTTTAAGGGAGAAAGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTACTCCTACTAAGGAGAAATTTGCTACTTTAAGGGAGAAAGGG  874

seq1  GAATGAAAGTTTTGTTTAAGTTTGTGTTTTCAGAAGCAATAAAACCCTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAGTTTTGTTTAAGTTTGTGTTTTCAGAAGCAATAAAACCCTCA  924

seq1  CTAGATCAAGGTATAGGAGAAAGTAGAGAGACAGGGTGCCATGTTTCTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCAAGGTATAGGAGAAAGTAGAGAGACAGGGTGCCATGTTTCTGA  974

seq1  TGGCGTGGCTAACAACTGAACTTTGGTAAGGAAAGGGGGAAGAAATATCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTGGCTAACAACTGAACTTTGGTAAGGAAAGGGGGAAGAAATATCT  1024

seq1  GTGCTATTTTATCCATCTCATACTAACAAACCTAGACTGTTTGTTTTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATTTTATCCATCTCATACTAACAAACCTAGACTGTTTGTTTTCAA  1074

seq1  GAGTTCAGCTCCAGCCAGCTTAGGCACCAGTTTACACATTACAGTTTGAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGCTCCAGCCAGCTTAGGCACCAGTTTACACATTACAGTTTGAT  1124

seq1  AAAGTGAATTC  1159
      |||||||||||
seq2  AAAGTGAATTC  1135