BAC Information

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BAC

Clone NameB6Ng01-342J20
Chromosome14 (Build37)14 (Build37)
Map Location 5,136,252 - 5,137,1847,214,002 - 7,217,167
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374
Downstream gene4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342J20.bB6Ng01-342J20.g
ACCGA125645GA125646
length9361,142
definitionB6Ng01-342J20.b B6Ng01-342J20.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(5,136,252 - 5,137,184)(7,214,002 - 7,217,167)
sequence
gaattccagggacataagctcactgaatcactgctttcattggaaaagta
aattttggccagaacaattctgtgctggctaactttatgtcaactaggca
ccagctgaaagcatctgagaggagggaagctcaatggagaaaattcctcc
acaagatcaggctgttgctatacctagaagacattttcttaattagattg
gtggatgcagtcccagcccattgtgggtgggaccgtcacttgcatggtgg
tcctaggttctataagaaattaggttgagcaagccataaggaacaagcca
gtaagcagcattccccagtggcctctgcatcagctcctgtctccagattt
ctatactgtttgagttcctgtccagattccttccatgatgagctgtgatg
tggaagtataagccaaataaacttttcttcccaagttactttggttatga
tattgcagcaatagaagctctatataacaaatttcaattaaaaattcatt
taacaaaccaactattaaatctattaggatgtatgttggcacatgatagc
aagtaggactctaaatgttaatttctatgataagggtttgttatccccaa
gcaccaaggaagtgcaaatcaaccacagtgacattctgcctcatacccca
tacctgtgagcacagatatcaaaaacagagcagagagatcaggcactgct
gacagcatacagtaaaggcatcattctgtgtctctgccttccctctaggg
gtcaggaatgccaccaatgtgccacttggggaaggcaaaactcagggata
ttagcctgtgtttcttcctagcccctggggtgctgagccacattgctcag
ggaaaggctgaaacacagtcacagatagggggccaagcctgtgtttctct
gggtgaaaagagcagggttggggggggaagggggaa
gaattcaagagagatgtgtgcaacttagaaaaccatgtggattccttatg
gggtgcgagcatgccctgaacagaagtgaaggctatgattgtttctccag
tgcaggaacctcacagggttcctcttgtcaatccccctatctgcaaataa
ccagagacaccttacaacacaaaagcccatgggtacttcataggtcctag
aatctgcaagagtttgctaaagaaaaatattcccaaggccgagcaatgaa
ccttaaaagttatggtcatgaaaaaaacaaaacaacacccctgtacatct
atgactattgtagggcacacattcaaacacacataatatttgtgtttatg
caatacaagcatattgtattgcagtgacctgtttagtttcccggttaata
caaatataaaaatctcccaggaaacattggaggcataaaaaacaaatctt
gaaggggaaagatacttagtgggcatagcatataggaaacacagtcagtg
atatgctttccactcataaaccggtctgggattcagggttcttgtcctat
tatccaatctggctcagcaagttcccaaggctgtgtagaataggtttgtt
tcccagcctaggctcacatgttgttggtggaccagcctcttgttgttgct
cactgtttcagacttgtcccaaggtaaacagtttcttccaataggatctc
ccctttccatcacctgactgacttggtgtccaaaggtatgagcccagagt
aataggaactgtctataactaggatccaaaggaaccattttctccccaga
atgtgattgtgccagggctattttgagtaagaaaaggatgactaattgaa
gggcaaaagcttgcatggattatctcacactgagttcatgggaagggctg
caccacacaggaccttttcattcttcagcagatggacatcagatagcttc
tgctttctgacatggcttcttaaaaacaataccaatttttatactaccag
aactgttcttgaaggttcctcatttctcccaacccccactgagctgattt
aactcttgagaaaattgaatgtttgagacagtccgctgaatgcctacaca
gaataagaataggttgtgagatactttagaattatcaagacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5136252_5137184
seq2: B6Ng01-342J20.b_50_985

seq1  GAATTCCAGGGACATAAGCTCCCTGAATCACTGCTTTCATTGGAAAAGTA  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAATTCCAGGGACATAAGCTCACTGAATCACTGCTTTCATTGGAAAAGTA  50

seq1  AATTTTGGCCAGAACAATTCTGTGCTGGCTAACTTTATGTCAACTAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGCCAGAACAATTCTGTGCTGGCTAACTTTATGTCAACTAGGCA  100

seq1  CCAGCTGAAAGCATCTGAGAGGAGGGAAGCTCAATGGAGAAAATTCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGAAAGCATCTGAGAGGAGGGAAGCTCAATGGAGAAAATTCCTCC  150

seq1  ACAAGATCAGGCTGTTGCTATACCTAGAAGACATTTTCTTAATTAGATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCAGGCTGTTGCTATACCTAGAAGACATTTTCTTAATTAGATTG  200

seq1  GTGGATGCAGTCCCAGCCCATTGTGGGTGGGACCGTCACTTGCATGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCAGTCCCAGCCCATTGTGGGTGGGACCGTCACTTGCATGGTGG  250

seq1  TCCTAGGTTCTATAAGAAATTAGGTTGAGCAAGCCATAAGGAACAAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTCTATAAGAAATTAGGTTGAGCAAGCCATAAGGAACAAGCCA  300

seq1  GTAAGCAGCATTCCCCAGTGGCCTCTGCATCAGCTCCTGTCTCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGCATTCCCCAGTGGCCTCTGCATCAGCTCCTGTCTCCAGATTT  350

seq1  CTATACTTTTTGTGTTCCTGTCCTGACTTCCTTCCATGATGAGCTGTGAT  400
      ||||||| |||| |||||||||| || |||||||||||||||||||||||
seq2  CTATACTGTTTGAGTTCCTGTCCAGA-TTCCTTCCATGATGAGCTGTGAT  399

seq1  GTGGAAGTATAAGCCAAATAAACTTTTCTTCCCAAGTTACTTTGGTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTATAAGCCAAATAAACTTTTCTTCCCAAGTTACTTTGGTTATG  449

seq1  ATATTGCAGCAATAGAAGCTCTATATAACAAATTTCAATTAAAAATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCAGCAATAGAAGCTCTATATAACAAATTTCAATTAAAAATTCAT  499

seq1  TTAACAAACCAACTATTAAATCTATTAGGATGTATGTTGGCACATGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAACCAACTATTAAATCTATTAGGATGTATGTTGGCACATGATAG  549

seq1  CAAGTAGGACTCTAAATGTTAATTTCTATGATAAGGGTTTGTTATCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGACTCTAAATGTTAATTTCTATGATAAGGGTTTGTTATCCCCA  599

seq1  AGCACCAAGGAAGTGCAAATCAACCACAGTGACATTCTGCCTCATACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAGGAAGTGCAAATCAACCACAGTGACATTCTGCCTCATACCCC  649

seq1  ATACCTGTGAGCACAGATATCAAAAACAGAGCAGAGAGATCAGGCACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTGAGCACAGATATCAAAAACAGAGCAGAGAGATCAGGCACTGC  699

seq1  TGACAGCATACAGTAAAGGCATCATTCTGTGTCTCTGCCTTCCCTCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGACAGCATACAGTAAAGGCATCATTCTGTGTCTCTGCCTTCCCTCTAGG  749

seq1  GGTCAGGAATGCCACCAATGTGCCACTTGGGGAAGGCAAAACTCAGGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGAATGCCACCAATGTGCCACTTGGGGAAGGCAAAACTCAGGGAT  799

seq1  ATTAGCCTGTGTTTCTTCCTAGCCCCTGGGGTGCTGAGCCACATTGCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCTGTGTTTCTTCCTAGCCCCTGGGGTGCTGAGCCACATTGCTCA  849

seq1  GGG-AAGGCTGAAACACAGTCACAGATAGGGGGCCAAGCCTGTGTTTCTC  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGCTGAAACACAGTCACAGATAGGGGGCCAAGCCTGTGTTTCTC  899

seq1  TGGGTGAAAAGAGCAGGGTTGGGGGG---AGGGGGAA  933
      ||||||||||||||||||||||||||   ||||||||
seq2  TGGGTGAAAAGAGCAGGGTTGGGGGGGGAAGGGGGAA  936

seq1: chr14_7214002_7217167
seq2: B6Ng01-342J20.g_67_1208

seq1  GAATTCAAGAGAGATGTGTGCAACTTAGAAAACCATGTGGATTCCTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAGATGTGTGCAACTTAGAAAACCATGTGGATTCCTTATG  50

seq1  GGGTGCGAGCGTGCCCTGAACAGAAGTGAAGGCTATGATTGTTTCTCCAG  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCGAGCATGCCCTGAACAGAAGTGAAGGCTATGATTGTTTCTCCAG  100

seq1  TGCAGGAACCTCACAGGGTTCCTCTTGTCAATCCCCCTATCTGCAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAACCTCACAGGGTTCCTCTTGTCAATCCCCCTATCTGCAAATAA  150

seq1  CCAGAGACACCTTACAACACAAAAGCCCATGGGTACTTCATAGGTCCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACACCTTACAACACAAAAGCCCATGGGTACTTCATAGGTCCTAG  200

seq1  AATCTGCAAGAGTTTGCTAAAGAAAAATATTCCCAAGGCCGAGCAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAAGAGTTTGCTAAAGAAAAATATTCCCAAGGCCGAGCAATGAA  250

seq1  CCTTAAAAGTTATGGTCATGAAAAAAACAAAACAACACCCCTGTACATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAGTTATGGTCATGAAAAAAACAAAACAACACCCCTGTACATCT  300

seq1  ATGACTATTGTAGGGCACACATTCAAACACACATAATATTTGTGTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATTGTAGGGCACACATTCAAACACACATAATATTTGTGTTTATG  350

seq1  CAATACAAGCATATTGTATTGCAGTGACCTGTTTAGTTTCCCGGTTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAAGCATATTGTATTGCAGTGACCTGTTTAGTTTCCCGGTTAATA  400

seq1  CAAATATAAAAATCTCCCAGGACACTTTGGAGGCATAAAAAACAAATCTT  450
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  CAAATATAAAAATCTCCCAGGAAACATTGGAGGCATAAAAAACAAATCTT  450

seq1  GAAGGGGAAAGATACTTAGTGGGCATAGCATATAGGCAACACAGTCAATG  500
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  GAAGGGGAAAGATACTTAGTGGGCATAGCATATAGGAAACACAGTCAGTG  500

seq1  ATATGCTTTCCACTCATAAACCGGTCTGGGATTCAGGGTTCTTGTCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTTCCACTCATAAACCGGTCTGGGATTCAGGGTTCTTGTCCTAT  550

seq1  TATCCAATCTGGCTCAGCAAGTTCCCAAGGCTGTGTAGAATATGTTTGTT  600
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATCCAATCTGGCTCAGCAAGTTCCCAAGGCTGTGTAGAATAGGTTTGTT  600

seq1  TCCCAGCCTAGGCTCACATGTTGGTGGTGGACCAGCCTCTTCTTGTTGCT  650
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TCCCAGCCTAGGCTCACATGTTGTTGGTGGACCAGCCTCTTGTTGTTGCT  650

seq1  CACTGTTTCAGACTTGTCCCAAAGTAAACAGTTTCTTCCAATAGGATCTC  700
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACTGTTTCAGACTTGTCCCAAGGTAAACAGTTTCTTCCAATAGGATCTC  700

seq1  CCCTTTCCATCACCTGACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCATCACCTGACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGT  750

seq1  AATAGGAACTGTCTATAACTAGGATCCAAAGGAACCATTTTCTCCCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAACTGTCTATAACTAGGATCCAAAGGAACCATTTTCTCCCCAGA  800

seq1  ATGTGATTGTGCCAGGGCTATTTTGAGTAAGAAAAGGCTGACTAATTGAA  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGTGATTGTGCCAGGGCTATTTTGAGTAAGAAAAGGATGACTAATTGAA  850

seq1  GGGCAAAAGCTTGCATGGATTATCTCACACTGAGTTCAT-GGAAGGGCTG  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGCAAAAGCTTGCATGGATTATCTCACACTGAGTTCATGGGAAGGGCTG  900

seq1  CACCACACAGGACCTTTTCATTCTTCAGCAGATGGACATCAGGATAGCTT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||  
seq2  CACCACACAGGACCTTTTCATTCTTCAGCAGATGGACATCA-GATAGC--  947

seq1  CTCCTTCAGGGCTGCTCTGAGGACGACTACAACACTGAGTGACCTAGACT  999
                                                        
seq2  --------------------------------------------------  947

seq1  CTATCGATATCTCCTCCTTGTTCTGGAAACACTGGGTCAAAAAAGACTTC  1049
                                                        
seq2  --------------------------------------------------  947

seq1  TTTTCTACTTTCTGAACATGGCTTCTGACAGAC-ATACCCAATTTTATAC  1098
        |||| ||||||| ||||||||||| | | || ||||| | ||||||||
seq2  --TTCTGCTTTCTG-ACATGGCTTCTTAAAAACAATACCAATTTTTATAC  994

seq1  TACCAGAACTGT--CTGAAGG-TCCTCATTTCTCCCAACCCCCACTGAGG  1145
      ||||||||||||   |||||| |||||||||||||||||||||||||| |
seq2  TACCAGAACTGTTCTTGAAGGTTCCTCATTTCTCCCAACCCCCACTGA-G  1043

seq1  CTGATTTTAACTC-TGAGAAAAT--GATGTTGAAGAACAGTCATGCTGAA  1192
      |||| |||||||| |||||||||   |||||  || ||||||  ||||||
seq2  CTGA-TTTAACTCTTGAGAAAATTGAATGTTTGAG-ACAGTC-CGCTGAA  1090

seq1  TG-CTACACAG-ATAAG-ATAG--TGTGAG-TACTTTAG-ATTATCAAGA  1235
      || |||||||| ||||| ||||  |||||| |||||||| ||||||||||
seq2  TGCCTACACAGAATAAGAATAGGTTGTGAGATACTTTAGAATTATCAAGA  1140

seq1  CCCTCAATGGGCTCCTGTAACAGGCCTGGTTTGCTCCACAGCTATGGGAA  1285
      ||                                                
seq2  CC------------------------------------------------  1142

seq1  TTCTGCTGGATGCAAGTTCAGCTCCAAACAACTCAATCTCTCAATGAGTA  1335
                                                        
seq2  --------------------------------------------------  1142

seq1  AAATCCAAGACAAACTACAAGGCAAAACTTTACTGAGTAGAGGTAGCAGG  1385
                                                        
seq2  --------------------------------------------------  1142

seq1  AAATGTTATGGTGGCAGGCATTGAGGAAAACAACCTGGAATGCTTAGAAG  1435
                                                        
seq2  --------------------------------------------------  1142

seq1  ACACAGTGAGCCACCTGACCTCCCAGTGGTCCTTCACAATTCACCAAGAG  1485
                                                        
seq2  --------------------------------------------------  1142

seq1  CAGAAAAGGGACATAAACACATGGATTTTATAGAGCAACCTCCTCCTTAC  1535
                                                        
seq2  --------------------------------------------------  1142

seq1  CTTTATATACCATATCCCTTACATTTGCTCTAATGATTTTAATGAGAATC  1585
                                                        
seq2  --------------------------------------------------  1142

seq1  AATAGCTTTGTCTCTAGTCAGCTAAAAATCTGACCCTACAACAATTTTTG  1635
                                                        
seq2  --------------------------------------------------  1142

seq1  TGTCCTTTTTTTCTTGGTTTTTATGTGAGCATGCAGAATAAATGGACTGC  1685
                                                        
seq2  --------------------------------------------------  1142

seq1  TGTATTTGATATTTCATAGGTGCAAGCTAAAACCTCAGAGTGAATTTCTC  1735
                                                        
seq2  --------------------------------------------------  1142

seq1  AGTAAATTTGGCCTCTAGAGACACACACAGATGCATTTATGCACAATCAC  1785
                                                        
seq2  --------------------------------------------------  1142

seq1  ACACACACACAAACACACACACACACACACACACATTTGTATATACAAGC  1835
                                                        
seq2  --------------------------------------------------  1142

seq1  ACACATATCACAAAATTACCTAGTATTTCACAAACACACAAATTTAATAT  1885
                                                        
seq2  --------------------------------------------------  1142

seq1  AAACATGCTCAGCCAAAGGTGGTCCAAACATACACAAACATACACACAAG  1935
                                                        
seq2  --------------------------------------------------  1142

seq1  ACACACAAACATACACACATTATACTGGAGTTCTAAAAAACACCACATTT  1985
                                                        
seq2  --------------------------------------------------  1142

seq1  CCCCAGTTGTGCAGGTATATTTTACTTAGCAATAACATTGTAGCAATGTC  2035
                                                        
seq2  --------------------------------------------------  1142

seq1  TGAATATGAGTTCAAGAGAGATGTAAGCAACCTAGAAACCATGTGGATTC  2085
                                                        
seq2  --------------------------------------------------  1142

seq1  CTTATGGGGTGGGAGCATGCCCTGAACTGAAGTGAAGGCTATGATGATTT  2135
                                                        
seq2  --------------------------------------------------  1142

seq1  CTCCAGTGCAGGAACCTCACAGGGTTCCTCTTGTCAATCCCTCTATCTGC  2185
                                                        
seq2  --------------------------------------------------  1142

seq1  AAATAACCAGAGACACCATACAACACAAAACCCATGGGTACTTCATAGGT  2235
                                                        
seq2  --------------------------------------------------  1142

seq1  TGCAGTATCTGCAAAACTTTGCTAAATAAAAATATTCACAAGGCCTGGCA  2285
                                                        
seq2  --------------------------------------------------  1142

seq1  CTGAACCTTAAAAGTGATGGTCATGAAGAAACAGAAAAACACCCCTGTAC  2335
                                                        
seq2  --------------------------------------------------  1142

seq1  ATCTATGACTATTGTAGGTCACACCCTCAAACACACATAATATTTGTATT  2385
                                                        
seq2  --------------------------------------------------  1142

seq1  TATGCAATACAAGCATATTGTATTGCAGTGACCTGTTTAGTTTCCCGGTT  2435
                                                        
seq2  --------------------------------------------------  1142

seq1  AATACTAATATAAAAATCTCCCAGGACACTTTGGAGGCATAAAAACAAAT  2485
                                                        
seq2  --------------------------------------------------  1142

seq1  CTTGAAGGGGAAAGATACTTAGTGGGCATAGCATATAGGCAGCTCAATCA  2535
                                                        
seq2  --------------------------------------------------  1142

seq1  GTGATAGGCTTTCCACTCATAAACCGGTCTGGGATTCAGGGTTCTTGTCC  2585
                                                        
seq2  --------------------------------------------------  1142

seq1  TATTATCCAATCTGGCTCAGCAAGTTCCCAAGGCTGTGTAGAATATGTTT  2635
                                                        
seq2  --------------------------------------------------  1142

seq1  GTTTCCCAGCCTAGGCTCACATGTTGGTGGTGGACCAGCCTCTTGTTGCT  2685
                                                        
seq2  --------------------------------------------------  1142

seq1  CACTGTTTCAGACTTGTCCCAAAGTAAACAGTTTCTTCCAATAGGATCTC  2735
                                                        
seq2  --------------------------------------------------  1142

seq1  CCCTTTCCATCACCTGACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGT  2785
                                                        
seq2  --------------------------------------------------  1142

seq1  AATAGGAACTGTCTATAACAGGATCCAAAGGAAACATTTTCTCCCCAGAA  2835
                                                        
seq2  --------------------------------------------------  1142

seq1  TGTGATTGTGTCAGGGCTATTTTGAGTAAGATAGGGCTCACTAGTTGAAG  2885
                                                        
seq2  --------------------------------------------------  1142

seq1  GACAAAAGTTTGCATGGATTATCTCACACTGAGTTCATGGAAGGGCTGCA  2935
                                                        
seq2  --------------------------------------------------  1142

seq1  CCATTAGGACCTTTTCATTCTTCAGCAGATGGACATCAGGATAGCTTCTG  2985
                                                        
seq2  --------------------------------------------------  1142

seq1  CATTCTGAACATGGCTTCTAAAAAACATAACCAATTTTATACTACCAGAA  3035
                                                        
seq2  --------------------------------------------------  1142

seq1  CTGTCTGAAGGTCCTCATTTCTCCCAACCCCCACTGAGGCTGATTTTAAC  3085
                                                        
seq2  --------------------------------------------------  1142

seq1  TCTGAGAAAATGGTGTTGAAGAACAGTCCCGCTGAATGCTACACAGATAA  3135
                                                        
seq2  --------------------------------------------------  1142

seq1  GATAGTGTGAGTACTTTAGATTATCAAGACC  3166
                                     
seq2  -------------------------------  1142