BAC Information

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BAC

Clone NameB6Ng01-344D23
Chromosome14 (Build37)
Map Location 44,066,639 - 44,067,576
singlet/doubletsinglet
Overlap geneLOC673380
Upstream geneLOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik
Downstream geneLOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344D23.bB6Ng01-344D23.g
ACCGA126788GA126789
length1,167986
definitionB6Ng01-344D23.b B6Ng01-344D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagccaaaccttgtcaataaacagtgaatgatttatgaataga
tgggaaacttcatggtgcatgcagaattcagagttctggtctcaggaagt
aaagaatttttcttgaatggaaacactacaaaactctcagtagagttcag
gaaaaggtggatgggcctcattcttactttgggcctattgtacccaaata
cagggagggattcatccctatactatttgattggaatgcctgctgcattg
ctttccaggctcagagataatcagctacccaaaatataactattactttt
tcattacccgttttctccagttctccataaaggttattcatctgactacc
tgagagacagagtgggcttctgactaccccaccatccccccagacacctt
ggaccaatgtcatagtgatattgcatagctcaagatggtagacaaagaca
acacaatcaatttggaaaggctttacatgatttttccactattttactgg
agagtttaggtagcattttagcatgcattcagcacacggaggtcaagaag
gcagaaggaacagatgtcaatgccaaagagagcccctcctgaaattatgg
atccattaaaattgaggtttcactggacccgaggcctgttcatcctctat
ccatccaattgagtcttaggtatcttatgaatacaggatcatattccaat
cttcaacagactcaggcctagaactgggaactcaaaaaggtagaaactgg
agaagtgagagctaatgggactacgaagaagcaatccaatgtccctgttg
gcctttgttcacagatgcctattttgtctggttgttttggagaaagagag
attgtgggattttagcttttgaagaacggatataaactttacaatttgat
gttgcccctgtccctgacttcttctattgccaagtacaaggagatttcat
tgcaaagaaatggggttgtaaatcagagatttcatgaaacccatggctca
cttttattgaacaatgtctcctctcaaggcagtgcacactacacatatac
ttccacttgtgtaagtaaagtacagagtaaggtttctgttctctgaacag
agacatcttggtatcgactgttatactgaacgaccagatgatacatttat
atattgggaggaagtac
gaattccagatacagcctttttgcacatgatacttggttgcttagttcag
aggatgatttattctttgggccatgctctaccacaggatgaacactgaat
tcaccatcattaaatcacaacatgagaagacaatgttggatatggaaaaa
atgaagcagtcaataactgattccattgacaagtacaaggaattcataga
agataatgattcctacaggtgagtcccagacacagctgagacccagcact
aggcagggaatgcttgtggccttctaggactttgtacaaaagtgagagct
ctagttctatactctctgtttcttaataggagccctcccttgaggcatgg
gtcttggatttgtacctcttagactcaggtttcctaagtgtgaatattgt
ccaagaccctccagtctttattcttccaaattcaggatcttctgcataga
aaccatttccaccatgctgggaatctcaagcaaccctgaacttctagggt
tctgacagcagattacaagatctgggatccatgacaaaaatggaaagagt
ttataccttttgggtcttctctcctccctaagagggcattgccctctcca
tactgatggttttctggtactacacacatatgagcaaccatgaggaagtt
ttcctcttctgtgatgtatatggaacactcttggtgtcagggttttcaga
aatatttttgagtcttgttgcatgtggctggtctctggatttgacctgcc
tctatttggtacttatggatatacagtggtctctagtctcgggctgtctg
gggattcagagaaccttgcaggcatcataatatttggaagagtggcaggc
aaatcaaaagctagctgggaatcaacaatttatgtttgtatgttttgtgg
gttcagcatcagggcacaccctaccctccttgaaaggattgcaatcaatt
tgaagaaaaaaagtaggatgtttgctgaatgaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44066639_44067576
seq2: B6Ng01-344D23.g_67_1015

seq1  GAATTCCAGATACAGCCTTTTTGCACATGATACTTGGTTGCTTAGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATACAGCCTTTTTGCACATGATACTTGGTTGCTTAGTTCAG  50

seq1  AGGATGATTTATTCTTTGGGCCATGCTCTACCACAGGATGAACACTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATTTATTCTTTGGGCCATGCTCTACCACAGGATGAACACTGAAT  100

seq1  TCACCATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGAAAAA  150

seq1  ATGAAGCAGTCAATAACTGATTCCATTGACAAGTACAAGGAATTCATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAGTCAATAACTGATTCCATTGACAAGTACAAGGAATTCATAGA  200

seq1  AGATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGAGACCCAGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGAGACCCAGCACT  250

seq1  AGGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAAAAGTGAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAAAAGTGAGAGCT  300

seq1  CTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCCTTGAGGCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCCTTGAGGCATGG  350

seq1  GTCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGTGTGAATATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGTGTGAATATTGT  400

seq1  CCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATCTTCTGCATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATCTTCTGCATAGA  450

seq1  AACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGAACTTCTAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGAACTTCTAGGGT  500

seq1  TCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAAATGGAAAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAAATGGAAAGAGT  550

seq1  TTATACCTTTTGGGTCTTCTCTCCTCCCTAAGAGGGCATTGCCCTCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTTTTGGGTCTTCTCTCCTCCCTAAGAGGGCATTGCCCTCTCCA  600

seq1  TACTGATGGTTTTCTGGTACTACACACATATGAGCAACCATGAGGAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGGTTTTCTGGTACTACACACATATGAGCAACCATGAGGAAGTT  650

seq1  TTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTCAGGGTTTTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTCAGGGTTTTCAGA  700

seq1  AATA-TTTTGAGTCTTGTTGCATGTGGCTGGTCTCTGGATTTGACCTGCC  749
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTGAGTCTTGTTGCATGTGGCTGGTCTCTGGATTTGACCTGCC  750

seq1  TCTATTTGGTACTTATGGATATACAGTGGTCTCTAGTCTCGGGCTGTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGGTACTTATGGATATACAGTGGTCTCTAGTCTCGGGCTGTCTG  800

seq1  GGGA-TCAGAG-ACCTTGCAGGCATCATAATATTTGGAAGAGTGGCAGGC  847
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCAGAGAACCTTGCAGGCATCATAATATTTGGAAGAGTGGCAGGC  850

seq1  AAATC-AAAGCTAGCTGGGAATCAAC-ATTTATGTTTTGTATG-TTTGT-  893
      ||||| |||||||||||||||||||| ||||||| |||||||| ||||| 
seq2  AAATCAAAAGCTAGCTGGGAATCAACAATTTATG-TTTGTATGTTTTGTG  899

seq1  GGTTCAGCATCA-GGCACACCC--ACCTCC-TGAAA-GAATGCAATCAAT  938
      |||||||||||| |||||||||   ||||| ||||| || ||||||||||
seq2  GGTTCAGCATCAGGGCACACCCTACCCTCCTTGAAAGGATTGCAATCAAT  949