BAC Information

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BAC

Clone NameB6Ng01-344G22
Chromosome14 (Build37)
Map Location 114,805,026 - 114,937,307
singlet/doubletdoublet
Overlap geneLOC100043821
Upstream geneLOC100043510, LOC382947, LOC668791
Downstream geneLOC100043521, Gpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344G22.bB6Ng01-344G22.g
ACCGA126919GA126920
length1,1401,101
definitionB6Ng01-344G22.b B6Ng01-344G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,936,161 - 114,937,307)(114,805,026 - 114,806,134)
sequence
gaattcattgctgacctagtttgtccaacacctcatgccctttttgtttg
gaactttgggaacagcctaggatcctctgtacaggtgaaattcctatgtc
tgtctttaactcttgctgacccttcacacatgacattatctagtggttta
actctttgaggggatcctgtttcatatccaagctaaagacttggaaactt
gattagattgtctttcttgggtctcctagtaacttcataatcaattattg
tttttatttatttgttttgttttaaatattataattattagttctttaat
aaatttctcatttttatttttttattgaaaatagatttattttctcacat
aatatatcctgcttatggtttcctctgcgtcttacttccttgcttttcca
taccttcatttccctccagatccatcccatccctgtatcattagaaaata
aacaggcttctatgggataataatatatatgagtggttagctgacacagg
gaagaaaatagagaacagaactgtgccacttggaaagatcatgatagttt
gtaagaaagtacatcaaggtaaagtggtagcgagaggaaaagaaagggat
ggttttcttagattaattcatcagaaaatgttgtattatgtcaatacatt
tatatgtaaaatagagaacagggctagacatagaaatactttattttcaa
gaaaaacactatttaaatcagaatgctacagtttgctatgtggtataagt
gaaatgagtcatagtaacacagatgaggaaacaataaattccccaagtac
aagaaggctttatgtcggttcatctgacatatgaatttcttgaaaagagt
tttaagaataaaagaaatatgaactacattgaatattctctaataaaact
gttgacatataatttagacttgctattatcatttcaacttgttcaagtgt
tcatattaaaaataacctagctagaattgtttttctctaaattaagttgc
agataatgagttctgcatttcagatgataagtatgaacagaatcatattg
ttagagaaaaacagtttagcatattattggcctttatacagtaacttgca
ttttggtgtttgttagaatacaaaatgtttggcaaaggaa
gaattcatgttgatgtaaatggcttgtattacggacattgattattatca
atgtctgagaacatgttgatgtctttggtctgtgctgacactgaaggcta
atagtgtccatggcctgtcctgcagaagagaatcacgttgatatctgtga
tctgcactgccacaagagaccatgctgaggtccattgcatgtgctgatgc
tagagagcatgtggaagcccatgtggaagtaaagcacttttggtatggta
gtgatgtctgcagactcacagctgcggtggttctttaatccagaaataat
aatgcagaataaaccatggttcctggaatatattggaaccaagtgatgct
agcaaaaatgttgccattttttgacattcttcgtctcctcaaccttcatc
aaaataggatctggtttggaaggcgtcactgacttagcaaatagcctgta
tatgttccgcttatgtataagggaagcaatccagactatgaagtgtctgg
gcaggtgtagcctgcaggcataagtatacccataacaataggaatcacag
gaaagggagtgttgaacatcattttggcatttaatttttaagtactcttc
aaagtcccacttgctgaagcacggggccccagagggtggtgcttttggag
aggagagaaacggtagaaactttgggacaaatatggcagtgggagggact
taagtgactgaccagattgatctagtggtatatgctggaatctcacttgc
tctgcctttcctttgcagcttcctagccaccatgaatgatcaaatgcact
ctaccatgtgttcctacacagtactgtgcctcacctcaggtggaaagcaa
tgtaccagcacgcctgacagtcctgaggccattgaagttaagtaaatctc
aattttaagttatttgtctcatattttgccatatatagaaattatgataa
cagtgttataatttttaatgagactcaaggcaatccatcaaaattatata
tttttggcaaatacatggcttatagattcaacatgcccaaagaacaactt
aacaatagcattgcatggacacacttctgcagaatgaaacattggctgga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114936161_114937307
seq2: B6Ng01-344G22.b_42_1181 (reverse)

seq1  TTCCTTTTCCCAACATTTTTGTATTCT-ACAAACA-CAAAATGCAGTTAA  48
      ||||||| || |||| ||||||||||| ||||||| |||||||||  | |
seq2  TTCCTTTGCCAAACA-TTTTGTATTCTAACAAACACCAAAATGCAAGTTA  49

seq1  CTGTAT-AAGGCCATAATTATGCTAAACCTGTTTTTTCTCTAAACAATTA  97
      |||||| |||||||  | ||||||||| ||| ||||||||| ||||| ||
seq2  CTGTATAAAGGCCAATAATATGCTAAA-CTG-TTTTTCTCT-AACAA-TA  95

seq1  TGATTCTGTTCATTACTTTAATCATCCTGAAATGCAGAACTCATTTATCT  147
      |||||||||||| |||||  ||||| ||||||||||||||||| ||||||
seq2  TGATTCTGTTCA-TACTT--ATCAT-CTGAAATGCAGAACTCA-TTATCT  140

seq1  GCAACTAAATTTAGAGAAAAACAATTCTAGCTAGGTTATTTTTAATATGA  197
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTAATTTAGAGAAAAACAATTCTAGCTAGGTTATTTTTAATATGA  190

seq1  ACACTTGAACAAGTTGAAATGATAATAGCAAGTCTAAATTATATGTCAAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGAACAAGTTGAAATGATAATAGCAAGTCTAAATTATATGTCAAC  240

seq1  AGTTTTATTAGAGAATATTCAATGTAGTTCATATTTCTTTTATTCTTAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTAGAGAATATTCAATGTAGTTCATATTTCTTTTATTCTTAAA  290

seq1  ACTCTTTTCAAGAAATTCATATGTCAGATGAACCGACATAAAGCCTTCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTCAAGAAATTCATATGTCAGATGAACCGACATAAAGCCTTCTT  340

seq1  GTACTTGGGGAATTTATTGTTTCCTCATCTGTGTTACTATGACTCATTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGGGAATTTATTGTTTCCTCATCTGTGTTACTATGACTCATTTC  390

seq1  ACTTATACCACATAGCAAACTGTAGCATTCTGATTTAAATAGTGTTTTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATACCACATAGCAAACTGTAGCATTCTGATTTAAATAGTGTTTTTC  440

seq1  TTGAAAATAAAGTATTTCTATGTCTAGCCCTGTTCTCTATTTTACATATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATAAAGTATTTCTATGTCTAGCCCTGTTCTCTATTTTACATATA  490

seq1  AATGTATTGACATAATACAACATTTTCTGATGAATTAATCTAAGAAAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTGACATAATACAACATTTTCTGATGAATTAATCTAAGAAAACC  540

seq1  ATCCCTTTCTTTTCCTCTCGCTACCACTTTACCTTGATGTACTTTCTTAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTCTTTTCCTCTCGCTACCACTTTACCTTGATGTACTTTCTTAC  590

seq1  AAACTATCATGATCTTTCCAAGTGGCACAGTTCTGTTCTCTATTTTCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATCATGATCTTTCCAAGTGGCACAGTTCTGTTCTCTATTTTCTTC  640

seq1  CCTGTGTCAGCTAACCACTCATATATATTATTATCCCATAGAAGCCTGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCAGCTAACCACTCATATATATTATTATCCCATAGAAGCCTGTT  690

seq1  TATTTTCTAATGATACAGGGATGGGATGGATCTGGAGGGAAATGAAGGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTAATGATACAGGGATGGGATGGATCTGGAGGGAAATGAAGGTA  740

seq1  TGGAAAAGCAAGGAAGTAAGACGCAGAGGAAACCATAAGCAGGATATATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGCAAGGAAGTAAGACGCAGAGGAAACCATAAGCAGGATATATT  790

seq1  ATGTGAGAAAATAAATCTATTTTCAATAAAAAAATAAAAATGAGAAATTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGAAAATAAATCTATTTTCAATAAAAAAATAAAAATGAGAAATTT  840

seq1  ATTAAAGAACTAATAATTATAATATTTAAAACAAAACAAATAAATAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAACTAATAATTATAATATTTAAAACAAAACAAATAAATAAAAA  890

seq1  CAATAATTGATTATGAAGTTACTAGGAGACCCAAGAAAGACAATCTAATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTGATTATGAAGTTACTAGGAGACCCAAGAAAGACAATCTAATC  940

seq1  AAGTTTCCAAGTCTTTAGCTTGGATATGAAACAGGATCCCCTCAAAGAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCAAGTCTTTAGCTTGGATATGAAACAGGATCCCCTCAAAGAGT  990

seq1  TAAACCACTAGATAATGTCATGTGTGAAGGGTCAGCAAGAGTTAAAGACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACTAGATAATGTCATGTGTGAAGGGTCAGCAAGAGTTAAAGACA  1040

seq1  GACATAGGAATTTCACCTGTACAGAGGATCCTAGGCTGTTCCCAAAGTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGGAATTTCACCTGTACAGAGGATCCTAGGCTGTTCCCAAAGTTC  1090

seq1  CAAACAAAAAGGGCATGAGGTGTTGGACAAACTAGGTCAGCAATGAATTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAGGGCATGAGGTGTTGGACAAACTAGGTCAGCAATGAATTC  1140

seq1: chr14_114805026_114806134
seq2: B6Ng01-344G22.g_64_1164

seq1  GAATTCATGTTGATGTAAATGGCTTGTATTACGGACATTGATTATTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTGATGTAAATGGCTTGTATTACGGACATTGATTATTATCA  50

seq1  ATGTCTGAGAACATGTTGATGTCTTTGGTCTGTGCTGACACTGAAGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGAGAACATGTTGATGTCTTTGGTCTGTGCTGACACTGAAGGCTA  100

seq1  ATAGTGTCCATGGCCTGTCCTGCAGAAGAGAATCACGTTGATATCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTCCATGGCCTGTCCTGCAGAAGAGAATCACGTTGATATCTGTGA  150

seq1  TCTGCACTGCCACAAGAGACCATGCTGAGGTCCATTGCATGTGCTGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTGCCACAAGAGACCATGCTGAGGTCCATTGCATGTGCTGATGC  200

seq1  TAGAGAGCATGTGGAAGCCCATGTGGAAGTAAAGCACTTTTGGTATGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCATGTGGAAGCCCATGTGGAAGTAAAGCACTTTTGGTATGGTA  250

seq1  GTGATGTCTGCAGACTCACAGCTGCGGTGGTTCTTTAATCCAGAAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCTGCAGACTCACAGCTGCGGTGGTTCTTTAATCCAGAAATAAT  300

seq1  AATGCAGAATAAACCATGGTTCCTGGAATATATTGGAACCAAGTGATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGAATAAACCATGGTTCCTGGAATATATTGGAACCAAGTGATGCT  350

seq1  AGCAAAAATGTTGCCATTTTTTGACATTCTTCGTCTCCTCAACCTTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATGTTGCCATTTTTTGACATTCTTCGTCTCCTCAACCTTCATC  400

seq1  AAAATAGGATCTGGTTTGGAAGGCGTCACTGACTTAGCAAATAGCCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGATCTGGTTTGGAAGGCGTCACTGACTTAGCAAATAGCCTGTA  450

seq1  TATGTTCCGCTTATGTATAAGGGAAGCAATCCAGACTATGAAGTGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCGCTTATGTATAAGGGAAGCAATCCAGACTATGAAGTGTCTGG  500

seq1  GCAGGTGTAGCCTGCAGGCATAAGTATACCCATAACAATAGGAATCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGTAGCCTGCAGGCATAAGTATACCCATAACAATAGGAATCACAG  550

seq1  GAAAGGGAGTGTTGAACATCATTTTGGCATTTAATTTTTAAGTACTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAGTGTTGAACATCATTTTGGCATTTAATTTTTAAGTACTCTTC  600

seq1  AAAGTCCCACTTGCTGAAGCACGGGGCCCCAGAGGGTGGTGCTTTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCACTTGCTGAAGCACGGGGCCCCAGAGGGTGGTGCTTTTGGAG  650

seq1  AGGAGAGAAACGGTAGAAACTTTGGGACAAATATGGCAGTGGGAGGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAACGGTAGAAACTTTGGGACAAATATGGCAGTGGGAGGGACT  700

seq1  TAAGTGACTGACCAGATTGATCTAGTGGTATATGCTGGAATCTCACTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACTGACCAGATTGATCTAGTGGTATATGCTGGAATCTCACTTGC  750

seq1  TCTGCCTTTCCTTTGCAGCTTCCTAGCCACCATGAATGATCAAATGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTCCTTTGCAGCTTCCTAGCCACCATGAATGATCAAATGCACT  800

seq1  CTACCATGTGTTCCTACACAGTACTGTGCCTCACCTCAGGTGGAAAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATGTGTTCCTACACAGTACTGTGCCTCACCTCAGGTGGAAAGCAA  850

seq1  TGTACCAGCACGCCTGACAGTCCTGAGGCCATTGAAGTTAAGTAAATCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGCACGCCTGACAGTCCTGAGGCCATTGAAGTTAAGTAAATCTC  900

seq1  AATTTTAAGTTATTTGTCTCATATTTTGCCAATATAATAG-AATTATGAA  949
      |||||||||||||||||||||||||||||| |||| |||| ||||||| |
seq2  AATTTTAAGTTATTTGTCTCATATTTTGCC-ATAT-ATAGAAATTATG-A  947

seq1  TAACAGTGTTTATAATTTTTTAAATGAGACTCAAGGCAATCCATCAAAAT  999
      |||||||| |||||||||||  ||||||||||||||||||||||||||| 
seq2  TAACAGTG-TTATAATTTTT--AATGAGACTCAAGGCAATCCATCAAAA-  993

seq1  TTATATATTTTT-GCAAATAACATGGCTTAATAGATTTCAACATG-CCAA  1047
      |||||||||||| |||||| ||||||||| ||||| ||||||||| ||||
seq2  TTATATATTTTTGGCAAAT-ACATGGCTT-ATAGA-TTCAACATGCCCAA  1040

seq1  AG-ACAACTTAACAATAGCATTGCATGGGACACAACTCTGCAGAAATGAA  1096
      || ||||||||||||||||||||||| |||||||  ||||||| ||||||
seq2  AGAACAACTTAACAATAGCATTGCAT-GGACACACTTCTGCAG-AATGAA  1088

seq1  ACATTGCCTGGAG  1109
      |||||| ||||||
seq2  ACATTGGCTGGAG  1101