BAC Information

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BAC

Clone NameB6Ng01-344H01
Chromosome14 (Build37)
Map Location 112,201,223 - 112,201,587
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
Downstream geneLOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344H01.bB6Ng01-344H01.g
ACCGA126925GA126926
length1,1981,147
definitionB6Ng01-344H01.b B6Ng01-344H01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatccccttcggggcctgcagatcttctgtctattcttcgatg
aaagtccccaatctccatcttcagtttggctgtgggtgtctgtatctgtt
tgagtcagctgttaagtgaagcctctcagaggacaatatgctcctgtcta
caaacagaacagaatattattaatagtgtcagggactagtgcttgccaag
tggatgggtctcaagtagggccagttatttggttggccattcccacactc
tgctccattccccatgcctgcattatttgtaaacaggataaattttggat
tcagagttttgagagtgggttagtgtctgtatcgccccaccggggttcct
gacaggctacaggaggtggcctcttcaggttccacatcctcaatgtagtg
agtcacagctaaggtcatcatcattgattcttgggtgcctcctttctccc
aggctctgtctcattctggagatgccccgacctcccatccctgtaagtta
cagatttccattcattttcatggccatctagtcatctctcctttccctcc
ccattcctgatcctggacacctcaattccccttagtataccagtttcttc
cctccatctgcctcttaggacttttgtattcccccttctatgtgagattc
aagcttcttcacatgggcctcccttcctgacctctttgcgtctgtggagt
gtgccatagtacctgtattttatggctaataaccacttataaatgagtta
taccttgcatgtccttttgggattgggttgcctcactcaggatgatattc
tcaagttccatccatttgcctgcaaaatacatgatattttagttttttag
tagctgaacagcatttcattgtgtggatgtaccatattttctgtatccat
tcttccgttgagggacacctaagttattttccagtttctggctactacaa
atatagctgctatgaacatatgggagcaagtgtcttttttggtatgttgg
agcatgtttaaggtatatggcagaaatggtatagcttggtcttggagaga
agactatttccagctttttgaaaaaaaaaaaaaaaaaacttgtcaatgat
tgcggttctcagtaaagaatcaggagtccaaatggcattcagacttattc
agtgccttctctcagaaaccttgccaatagatgactcataaaaagtgt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggccaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcttca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaaggtgccccaactggtaagaaggacacatgctccaatat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagcttttaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacaccaatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatttagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggccctagcaa
cacagaagtggatgctcacagtcagctattggatggatcacaggctccca
atggaggagctagagaaagtacccaagagctaaagggattctgcaaccct
atagtgacacattatgaactacagtaccccgagctctgactctagctgca
tattgtatcaaaagatggctagtcgccatccactggaaagcgagtccatg
aacacacaacttatatgcccagtcggatgcaggtcaaaagtatataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112201223_112201587
seq2: B6Ng01-344H01.g_1077_1211

seq1  TATGAACTAATCAGTACCCCCAGAGCTCCTGTCTCTAGCTGCATA-TGTA  49
      |||||||||  |||||||||  ||||| ||| ||||||||||||| ||||
seq2  TATGAACTA--CAGTACCCC--GAGCT-CTGACTCTAGCTGCATATTGTA  45

seq1  GCAGAAGATGGCCTAGTCGGCCAT-CATTGGGAAGAGAAGCCCCTTGGTC  98
       || ||||||| |||||| ||||| || ||| ||| ||    || ||  |
seq2  TCAAAAGATGG-CTAGTC-GCCATCCACTGGAAAGCGA--GTCCATGAAC  91

seq1  TTACAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGAAGTG  148
        ||| |  ||||||| ||||||     |||    |||| |  | |||| 
seq2  --ACACAACTTATATG-CCCAGT----CGGA--TGCAGGTC--AAAAGT-  129

seq1  AGAGTGAGTGGGTAGCAGAGCAGGGCATGGGGAGGGTATAGGGTACTTTT  198
      | | | |                                           
seq2  ATA-TAA-------------------------------------------  135

seq1  GGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAATTAA  248
                                                        
seq2  --------------------------------------------------  135

seq1  AAAACAACAACATATCACAAACTGAAAAAAAATCACCCCCTCTAAAACAA  298
                                                        
seq2  --------------------------------------------------  135

seq1  AAGGAAATAAAAATAACTGAAACCAAATAAAACAACACAAAAAGTAGCAG  348
                                                        
seq2  --------------------------------------------------  135

seq1  AGGTCAAAAGTATATAA  365
                       
seq2  -----------------  135


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