BAC Information

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BAC

Clone NameB6Ng01-345F08
Chromosome14 (Build37)
Map Location 20,419,742 - 20,420,873
singlet/doubletsinglet
Overlap geneEG432825
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441
Downstream geneLOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345F08.bB6Ng01-345F08.g
ACCGA127562GA127563
length9961,133
definitionB6Ng01-345F08.b B6Ng01-345F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatcttgtcagccctgatgggtttccagggccttatctttgtg
ttgctttcattccctctggctctgaaattcttcccaccttctcttctgca
gagttcctgcgccctggagcggggaggggtttgatagagccatcccattt
aggcctgaggtttagagggtcttactctatgcacacttgtctggcagtgg
gtatctgtattcacttccatccactgcagaggaagcgtctcttataatgg
ctgagcaaggcattgatctatgagtgtggcagagtgtttttaggagtcat
tttatggctaaatttctttagaatttggttttaccctagatccctggcct
atcttgtttcaggtttttggtcactcacaaagtgtcagggatagattcta
tctcttgaggctgtccttcagtcaaatcagacattggttagtcacaccca
cagctgtgtgccaccattgccctagtacatcttgcaggtaggtaggtagt
cattgtagaccaaaggttttgtgatggtttgtatatgcttggtccaggga
gtggcactattagaaggtgtggccctgttggagtaggtatggccttattg
gagtaggtgtggcattgtgggtgggggctttaagaccctcatcctagctg
cctggaaagtcagtatttctgctagtagtcttcagaggaaaaatgtagaa
cttctcagtttcctcttgcaccatgcctgcctgccacggaccaggcccat
ttcacccccccccccccccaatccgtgggaatcagggtttcagacatatg
ggcaaagagtcagtgagaattgacagtacaggatagacacagactcgaga
gagttgtgctgaatcgtaaatgttttggtataaaagcgaagcaccagtct
ttaatataaaacagaaaaagaaagaaagaaaggggtatgggctgtcctcc
tgtcaggcaatatctcttttgtaatacctggacccgaaaatagaag
gaattcagtgttcatcctgtgttagggcatggcccaagaagcaaataatg
tgctgaattgaggattcaataatcatgtgcaaacaggctgtatcatggac
tacccaagccaattgcatgccacatcctagttccttaaaactgggtcccc
ttggtgctaattaaacttactatcctgggcagaggacagcaaagccaggg
gacctaatggagctagctgaccttcaagagcttcctgggcaagcatgaag
gaatagactacttctatgacaattttccaatacactgtgccacaggcaag
ggtcctataggtatctgtaatgactttcctcttatttttaaggcagggat
tctcattccttggttcctgttgttatgtgaattcccagaggacacaacta
ttatttacaggtgaaaggctttatcacacctcctcccccaggagattcct
gtgtgacagccagggaacaccaggagcaaacttccctggtgatcactttg
gacctctatggactcacaccaacaggacctgcaaactgtgcatcacacaa
atcctcagaccccatcaaaggtcccagagcctcagtcctgaacaaaacac
acacagctaagttcacacacatagacacaattagaatgccaaataaatcg
agagaggtgccatcgctcagaatatgatgaacaatatcagagtaaaggtg
tgatagcctgcaggcattgcattcacacactgagaggcaacaagtgtgag
caggtccttccagctgttgacagcaacaatcagattgcaagcaccccaag
gtcaagtacaaaagaagatgataataaacacacagcaccttgtttatcca
acaattaaacacctgtcaggcaacttaattgaatgatgggagatgacaca
ctccattcatggaaaggaaattgggtttaacagatggcacaatacaggca
acagggtactgggcataatttcctacctgtagttcaaatcctcatacatg
taaaggttcagattccacaacatttcctccatgtcatgctgatctcctca
atatccaaatttcatctctactttattttattattggatatctgatagtg
atgttgggaaattttggatgaagtattcctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20419742_20420873
seq2: B6Ng01-345F08.g_67_1199

seq1  GAATTCAGTGTTCATCCTGTGTTAGGGCATGGCCCAAGAAGCAAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTCATCCTGTGTTAGGGCATGGCCCAAGAAGCAAATAATG  50

seq1  TGCTGAATTGAGGATTCAATAATCATGTGCAAACAGGCTGTATCATGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATTGAGGATTCAATAATCATGTGCAAACAGGCTGTATCATGGAC  100

seq1  TACCCAAGCCAATTGCATGCCACATCCTAGTTCCTTAAAACTGGGTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGCCAATTGCATGCCACATCCTAGTTCCTTAAAACTGGGTCCCC  150

seq1  TTGGTGCTAATTAAACTTACTATCCTGGGCAGAGGACAGCAAAGCCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTAATTAAACTTACTATCCTGGGCAGAGGACAGCAAAGCCAGGG  200

seq1  GACCTAATGGAGCTAGCTGACCTTCAAGAGCTTCCTGGGCAAGCATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAATGGAGCTAGCTGACCTTCAAGAGCTTCCTGGGCAAGCATGAAG  250

seq1  GAATAGACTACTTCTATGACAATTTTCCAATACACTGTGCCACAGGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACTACTTCTATGACAATTTTCCAATACACTGTGCCACAGGCAAG  300

seq1  GGTCCTATAGGTATCTGTAATGACTTTCCTCTTATTTTTAAGGCAGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTATAGGTATCTGTAATGACTTTCCTCTTATTTTTAAGGCAGGGAT  350

seq1  TCTCATTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTA  400

seq1  TTATTTACAGGTGAAAGGCTTTATCACACCTCCTCCCCCAGGAGATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACAGGTGAAAGGCTTTATCACACCTCCTCCCCCAGGAGATTCCT  450

seq1  GTGTGACAGCCAGGGAACACCAGGAGCAAACTTCCCTGGTGATCACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACAGCCAGGGAACACCAGGAGCAAACTTCCCTGGTGATCACTTTG  500

seq1  GACCTCTATGGACTCACACCAACAGGACCTGCAAACTGTGCATCACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTATGGACTCACACCAACAGGACCTGCAAACTGTGCATCACACAA  550

seq1  ATCCTCAGACCCCATCAAAGGTCCCAGAGCCTCAGTCCTGAACAAAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGACCCCATCAAAGGTCCCAGAGCCTCAGTCCTGAACAAAACAC  600

seq1  ACACAGCTAAGTTCACACACATAGACACAATTAGAATGCCAAATAAATCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTAAGTTCACACACATAGACACAATTAGAATGCCAAATAAATCG  650

seq1  AGAGAGGTGCCATCGCTCAGAATATGATGAACAATATCAGAGTAAAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTGCCATCGCTCAGAATATGATGAACAATATCAGAGTAAAGGTG  700

seq1  TGATAGCCTGCAGGCATTGCATTCACACACTGAGAGGCAACAAGTGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCCTGCAGGCATTGCATTCACACACTGAGAGGCAACAAGTGTGAG  750

seq1  CAGGTCCTTCCAGCTGTTGACAGCAACAATCAGATTGCAAGCACCCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTCCAGCTGTTGACAGCAACAATCAGATTGCAAGCACCCCAAG  800

seq1  GTCAAGTACAAAAGAAGATGATAATAAACACACAGCACCTTGTTTATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTACAAAAGAAGATGATAATAAACACACAGCACCTTGTTTATCCA  850

seq1  ACAATTAAACACCTGTCAGGGCAACTTAATTGAATGATGGGAGATGACAC  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAATTAAACACCTGTCA-GGCAACTTAATTGAATGATGGGAGATGACAC  899

seq1  ACTCCATTCATGG-AAGGAAATTGGG-TTAACAGATGGCACAATACAGGC  948
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  ACTCCATTCATGGAAAGGAAATTGGGTTTAACAGATGGCACAATACAGGC  949

seq1  AACAGGGTACTGGGCATAA-TTCCTACCTGTAGTTCAAATCCTCATACAT  997
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACAGGGTACTGGGCATAATTTCCTACCTGTAGTTCAAATCCTCATACAT  999

seq1  GTAAAGGTTCAGGATTCCAC-ACATTTCCTCCATGTCATTGCTGATCTTC  1046
      ||||||||||| |||||||| ||||||||||||||||| |||||||| ||
seq2  GTAAAGGTTCA-GATTCCACAACATTTCCTCCATGTCA-TGCTGATC-TC  1046

seq1  CTC-ATATCC-AATTTCAATTCTCTAACTTTATTT--ATATTTGATATCT  1092
      ||| |||||| |||||||  ||||| |||||||||   |||| |||||||
seq2  CTCAATATCCAAATTTCA--TCTCT-ACTTTATTTTATTATTGGATATCT  1093

seq1  GATTAGTGATGTT-GGAATTTTGGGTTGAAGTATTTCTAGC  1132
      || |||||||||| |||| ||| || ||||||||| |||||
seq2  GA-TAGTGATGTTGGGAAATTTTGGATGAAGTATTCCTAGC  1133