BAC Information

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BAC

Clone NameB6Ng01-345G15
Chromosome14 (Build37)
Map Location 87,655,177 - 87,744,599
singlet/doubletdoublet
Overlap geneEG665324
Upstream geneEG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
Downstream geneTdrd3, LOC100043317, LOC100043780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345G15.bB6Ng01-345G15.g
ACCGA127618GA127619
length1,1751,093
definitionB6Ng01-345G15.b B6Ng01-345G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,743,437 - 87,744,599)(87,655,177 - 87,656,274)
sequence
gaattctctgtgtagatcttgcccatgtgagaaacagaaacttacaactt
aaactgctcccatccttggaacagtccagctgcacacaagtcatttttct
gaactgtttcacagatattcctgtaaagttgtctgtggctggttaatttt
tttttgacattgttgacaatgggtatttcttaaaaattggtaggcttgca
ctgactaatttttatggtaatttattcatttaatccagatttttccattt
atttgcatagaattgagtcatcttagaattctttgaatggcttccttctg
gggttagtctcacattgtcactttctaatttatataattatattcccctt
gtttatccccagtaaaccagattcctcttttctttttctgccaagactca
aggtttaaaattatcttttttcctgttctttaaacttacttttatttatt
aatacatacctttgttttttccattggttttgttttgcttttagaaattg
cttaatgctgcattatagcccttttgtgggtacgtgtcacaagtcagaac
ctcacaaaatttttatttgcatacattaattatatatgattaaaactttt
gtattatcacatgaagtggcctttggtttttctggcttatttctgatttt
gcttgatcatgatcattaagttggttgtgataaaatacatccactgatga
ttactcggtgatctgaaatatttcaattttcatgagtccatagacgttcg
aagcagacatgttttgataatggaggaccaatatttaagattcatcaacg
tttatttcactctgtacttatatgtatacatctgcatatgcatgtacatg
tttatgtgaggaatgcatatttgtatgtctgagcttttacagagtaacct
ttattgactgagctatctccagaagcccaaattcaatgatggataccaat
gatcgaattttttaatttgtctgtcaacttgacaaagataaagagtcatc
caggagggagaagattcagctgagattgttattccatcagattggacttg
ttaggcagtgtgtggtttggagccatttttcttgatttagtgattggatg
ttgggggagggtccaacctcacctgtggggagttctattccttcggactt
tagtcagaagttaacgagatagctg
gaattccaccctcatttaccaggtccttcagactccctaccctcgcccca
atctttatatacaggatacttttattcattagcttttcttgtcaccccaa
tcatctatttgacacaaaaaaatgtgcaagaggtaagacttaacatttga
aatgtaaataaagaaatgtccaattaaaaaaaaaagaggtaagactaatt
tcggctcactgaaagggttcagtgcactgtggcagaggaggcatgggtgg
aggagtttacatcatggctgacagtaagcagaaaggcggaggaaggcatc
aaaaacaaatacagctcccctagacatgccttgcatgactttcagattaa
gccccgcctcttacttttcatctccttgcaatgatgtcaccatattatga
atccatcaagggaccacgcctttcactaggtcagagccttcaaatgcatt
ttactaatctcttagatgtttattagtcttattggcttgatcagtgaaat
taattatctcaatatcattagaaagttaatagggaactgctcacttcttt
gataggctctctctcaacagaaaagtctttatatatttttgaaaaggatc
ctttaggctgcagactggtgatggtcagccatataattagtactgactag
agtcttcccagtcttgttgatcttacacagcatgatattttcattcaggg
tttagtaaatataatgcatagtcctgggaattcacaagggcactgagtta
tttcaaactaagccagactgaaaactattataaggatttagttgctgagc
ctagaagtgacgaaatgacttctgatgaggcactttcaatagacatatat
ttaaataggattcttacagttgccaagtagtggcactaagaggtgtaaga
aatgtataaaggatatacgatcctccttcagcaacatctagaaagcaaca
gtgtcaaggagaactctggcaaactagaataaaagtgaaaaatagtccct
tgctcattgcaaagatgtactttctggtggcaaatgatgttcacgctgac
attcatctagtcatgataaactcaaccgaagcatagcattcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87743437_87744599
seq2: B6Ng01-345G15.b_47_1221 (reverse)

seq1  CAGCTATCTCTCTTATACTTCTTGGGACTAAAGCCC--AGGAATAGAACT  48
      ||||||||||  ||| ||||||   |||||||| ||  ||||||||||||
seq2  CAGCTATCTC-GTTA-ACTTCT---GACTAAAGTCCGAAGGAATAGAACT  45

seq1  CCCCACA-GTG-GGCTGGGCCCTCCC---ACAT-CAATCACT-AATCAAG  91
      ||||||| ||| || ||| |||||||   |||| |||||||| |||||||
seq2  CCCCACAGGTGAGGTTGGACCCTCCCCCAACATCCAATCACTAAATCAAG  95

seq1  AAAA--TGCTC--AAACACAC-TTGCCTA--CAGT-CAATCTGATGGA--  131
      ||||   ||||  || |||||  ||||||   ||| ||||||||||||  
seq2  AAAAATGGCTCCAAACCACACACTGCCTAACAAGTCCAATCTGATGGAAT  145

seq1  TACAATCTTCAGCTGAA-ATTCTCTCCTCCTGGATGACTCTTTATCTTTG  180
       |||||| |||||||||  ||||| |||||||||||||||||||||||||
seq2  AACAATC-TCAGCTGAATCTTCTC-CCTCCTGGATGACTCTTTATCTTTG  193

seq1  TCAAGTTGACAGACAAATTTAAAAAATTCGATCATTGGTATCCATCATTG  230
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCAAGTTGACAGACAAA-TTAAAAAATTCGATCATTGGTATCCATCATTG  242

seq1  AATTTGGGCTTCTGGAGATAGCTCAGTCAATAAAGGTTACTCTGTAAAAG  280
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGCTTCTGGAGATAGCTCAGTCAATAAAGGTTACTCTGTAAAAG  292

seq1  CTCAGACATACAAATATGCATTCCTCACATAAACATGTACATGCATATGC  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACATACAAATATGCATTCCTCACATAAACATGTACATGCATATGC  342

seq1  AGATGTATACATATAAGTACAGAGTGAAATAAACGTTGATGAATCTTAAA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATACATATAAGTACAGAGTGAAATAAACGTTGATGAATCTTAAA  392

seq1  TATTGGTCCTCCATTATCAAAACATGTCTGCTTCGAACGTCTATGGACTC  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTCCTCCATTATCAAAACATGTCTGCTTCGAACGTCTATGGACTC  442

seq1  ATGAAAATTGAAATATTTCAGATCACCGAGTAATCATCAGTGGATGTATT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATTGAAATATTTCAGATCACCGAGTAATCATCAGTGGATGTATT  492

seq1  TTATCACAACCAACTTAATGATCATGATCAAGCAAAATCAGAAATAAGCC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACAACCAACTTAATGATCATGATCAAGCAAAATCAGAAATAAGCC  542

seq1  AGAAAAACCAAAGGCCACTTCATGTGATAATACAAAAGTTTTAATCATAT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACCAAAGGCCACTTCATGTGATAATACAAAAGTTTTAATCATAT  592

seq1  ATAATTAATGTATGCAAATAAAAATTTTGTGAGGTTCTGACTTGTGACAC  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATGTATGCAAATAAAAATTTTGTGAGGTTCTGACTTGTGACAC  642

seq1  GTACCCACAAAAGGGCTATAATGCAGCATTAAGCAATTTCTAAAAGCAAA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCACAAAAGGGCTATAATGCAGCATTAAGCAATTTCTAAAAGCAAA  692

seq1  ACAAAACCAATGGAAAAAACAAAGGTATGTATTAATAAATAAAAGTAAGT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCAATGGAAAAAACAAAGGTATGTATTAATAAATAAAAGTAAGT  742

seq1  TTAAAGAACAGGAAAAAAGATAATTTTAAACCTTGAGTCTTGGCAGAAAA  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAACAGGAAAAAAGATAATTTTAAACCTTGAGTCTTGGCAGAAAA  792

seq1  AGAAAAGAGGAATCTGGTTTACTGGGGATAAACAAGGGGAATATAATTAT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGGAATCTGGTTTACTGGGGATAAACAAGGGGAATATAATTAT  842

seq1  ATAAATTAGAAAGTGACAATGTGAGACTAACCCCAGAAGGAAGCCATTCA  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAGAAAGTGACAATGTGAGACTAACCCCAGAAGGAAGCCATTCA  892

seq1  AAGAATTCTAAGATGACTCAATTCTATGCAAATAAATGGAAAAATCTGGA  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTAAGATGACTCAATTCTATGCAAATAAATGGAAAAATCTGGA  942

seq1  TTAAATGAATAAATTACCATAAAAATTAGTCAGTGCAAGCCTACCAATTT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAATAAATTACCATAAAAATTAGTCAGTGCAAGCCTACCAATTT  992

seq1  TTAAGAAATACCCATTGTCAACAATGTCAAAAAAAAATTAACCAGCCACA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATACCCATTGTCAACAATGTCAAAAAAAAATTAACCAGCCACA  1042

seq1  GACAACTTTACAGGAATATCTGTGAAACAGTTCAGAAAAATGACTTGTGT  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTTACAGGAATATCTGTGAAACAGTTCAGAAAAATGACTTGTGT  1092

seq1  GCAGCTGGACTGTTCCAAGGATGGGAGCAGTTTAAGTTGTAAGTTTCTGT  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGACTGTTCCAAGGATGGGAGCAGTTTAAGTTGTAAGTTTCTGT  1142

seq1  TTCTCACATGGGCAAGATCTACACAGAGAATTC  1163
      |||||||||||||||||||||||||||||||||
seq2  TTCTCACATGGGCAAGATCTACACAGAGAATTC  1175

seq1: chr14_87655177_87656274
seq2: B6Ng01-345G15.g_64_1156

seq1  GAATTCCACCCTCATTTACCAGGTCCTTCAGACTCCCTACCCTCGCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCTCATTTACCAGGTCCTTCAGACTCCCTACCCTCGCCCCA  50

seq1  ATCTTTATATACAGGATACTTTTATTCATTAGCTTTTCTTGTCACCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATATACAGGATACTTTTATTCATTAGCTTTTCTTGTCACCCCAA  100

seq1  TCATCTATTTGACACAAAAAAATGTGCAAGAGGTAAGACTTAACATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATTTGACACAAAAAAATGTGCAAGAGGTAAGACTTAACATTTGA  150

seq1  AATGTAAATAAAGAAATGTCCAATTAAAAAAAAAAGAGGTAAGACTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATAAAGAAATGTCCAATTAAAAAAAAAAGAGGTAAGACTAATT  200

seq1  TCGGCTCACTGAAAGGGTTCAGTGCACTGTGGCAGAGGAGGCATGGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCACTGAAAGGGTTCAGTGCACTGTGGCAGAGGAGGCATGGGTGG  250

seq1  AGGAGTTTACATCATGGCTGACAGTAAGCAGAAAGGCGGAGGAAGGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTACATCATGGCTGACAGTAAGCAGAAAGGCGGAGGAAGGCATC  300

seq1  AAAAACAAATACAGCTCCCCTAGACATGCCTTGCATGACTTTCAGATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAATACAGCTCCCCTAGACATGCCTTGCATGACTTTCAGATTAA  350

seq1  GCCCCGCCTCTTACTTTTCATCTCCTTGCAATGATGTCACCATATTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGCCTCTTACTTTTCATCTCCTTGCAATGATGTCACCATATTATGA  400

seq1  ATCCATCAAGGGACCACGCCTTTCACTAGGTCAGAGCCTTCAAATGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAAGGGACCACGCCTTTCACTAGGTCAGAGCCTTCAAATGCATT  450

seq1  TTACTAATCTCTTAGATGTTTATTAGTCTTATTGGCTTGATCAGTGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATCTCTTAGATGTTTATTAGTCTTATTGGCTTGATCAGTGAAAT  500

seq1  TAATTATCTCAATATCATTAGAAAGTTAATAGGGAACTGCTCACTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCTCAATATCATTAGAAAGTTAATAGGGAACTGCTCACTTCTTT  550

seq1  GATAGGCTCTCTCTCAACAGAAAAGTCTTTATATATTTTTGAAAAGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCTCTCTCTCAACAGAAAAGTCTTTATATATTTTTGAAAAGGATC  600

seq1  CTTTAGGCTGCAGACTGGTGATGGTCAGCCATATAATTAGTACTGACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCTGCAGACTGGTGATGGTCAGCCATATAATTAGTACTGACTAG  650

seq1  AGTCTTCCCAGTCTTGTTGATCTTACACAGCATGATATTTTCATTCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCCAGTCTTGTTGATCTTACACAGCATGATATTTTCATTCAGGG  700

seq1  TTTAGTAAATATAATGCATAGTCCTGGGAATTCACAAGGGCACTGAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAAATATAATGCATAGTCCTGGGAATTCACAAGGGCACTGAGTTA  750

seq1  TTTCAAACTAAGCCAGACTGAAAACTATTATAAGGATTTAGTTGCTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACTAAGCCAGACTGAAAACTATTATAAGGATTTAGTTGCTGAGC  800

seq1  CTAGAAGTGACGAAATGACTTCTGATGAGGCACTTTCAATAGACATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGTGACGAAATGACTTCTGATGAGGCACTTTCAATAGACATATAT  850

seq1  TTAAATAGGATTCTTACAGTTGCCAAGTAGTGGCACTAAGAGGTGTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGGATTCTTACAGTTGCCAAGTAGTGGCACTAAGAGGTGTAAGA  900

seq1  AATGTATAAAGGATATACGATCCTCCTTCAGCAAACATCTAGAAAGCAAC  950
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  AATGTATAAAGGATATACGATCCTCCTTCAGC-AACATCTAGAAAGCAA-  948

seq1  CAGTTGTCAGGGAGAACTCTGGCAAACTAG-ATAAAAGGTGAAAATAG-C  998
      ||| ||||| |||||||||||||||||||| |||||||   ||||||| |
seq2  CAG-TGTCAAGGAGAACTCTGGCAAACTAGAATAAAAGTGAAAAATAGTC  997

seq1  CCCTGCTCATTGCAAAGATGTTACTTTCTGGTGGCAAAATGGATGTTCAC  1048
      || ||||||||||||||||| |||||||||||||||||   |||||||||
seq2  CCTTGCTCATTGCAAAGATG-TACTTTCTGGTGGCAAA--TGATGTTCAC  1044

seq1  GCTGACATTCATCTAGGTCATGATAAACTCAACAGAGGCATAGCATTCAA  1098
      ||||||||||||||| ||||||||||||||||| || |||||||||||||
seq2  GCTGACATTCATCTA-GTCATGATAAACTCAACCGAAGCATAGCATTCAA  1093