BAC Information

Click to search

BAC

Clone NameB6Ng01-345O18
Chromosome14 (Build37)
Map Location 95,559,105 - 95,560,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043356, LOC100043783, LOC677613
Downstream geneLOC100043784, LOC382931, 4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345O18.bB6Ng01-345O18.g
ACCGA127969GA127970
length1,1691,115
definitionB6Ng01-345O18.b B6Ng01-345O18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggaagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggtcacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
ggccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtatagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacaggctccca
atggagagctagagaaagtacccaaggagctaaagggatctgcacctata
ggtggatcacatatgactacagtaccccgagctctgactctagctgcata
tgtatcaaagattgctagtcgcatcacttgcaagagagcccatgcacctc
aacctttatattgctcagacggcacgctaggtcaaatggattgaccgcta
gacaagtgcgcttgctcca
gaattctcatcgagaatacaacattttaactctattataatgcttaaaga
aaaatcatatatttatatttaatcttttgataccatatcaaattcatgag
aatagttaatatagtatttatttctttattttatttaaaattcattactt
attatttataatattattctattattttatatatttatttatattatcta
tctttttagtatgtatttataaatatttattatttttattttagagatgg
tcacatatgttatttctatgtgatttcttgcttagtaagtggggactaat
ttcaaacatactaattaaaaccttggggaaaatacttgtttttctagttt
acagttttgacattatgcctacagaattgacaatataagtaaggatggtc
gtgaacttctacccatcttcctctgtctcccaatcactaagataataggc
tgccagtccatgctcaattttattttgaaataatttcatgtaatgtacat
aaaagaaagactaaattccctacatttttcacagaaattaactgacttca
tgtgtgaaaaccattacatctctttaactatagcttgaaggtagcaaaga
agtttttactgttaaaacaaatatttcagctggtataatagtatataatt
ttaaaaagtttacaattgtgatttcatgtcatcaactcaataccaaaatt
tattttagctgtgttaaaacacagagtgactttgagtttaataaatataa
actggaggctaaacgtctagtgtcaactactgagagaagcatgtgtgacc
atgacttaatggaatattaagctactactccacttttcaccatatggggc
ccagaaattataaaacattgaagctagaaatttcctaaaactacactaga
tgaagactgtgcttttcttcaaggaaactacatatccagatgagattgtt
ttataatctgagaattgtaactcagcttttccttcatacactaatactta
ttctcaatactgatatatcaacacacatgaaagctggcactggaagcagt
aggattctcatcaatgacaaaggttacaaccaatcacaaaatcaaaccaa
accaaacccttcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95559105_95560223
seq2: B6Ng01-345O18.g_66_1180 (reverse)

seq1  TTTGA--GGTTTTGTTT-GTTTGTTTTTGTGGATTGGTTGTAAACCTTTG  47
      |||||  ||||| |||| ||||| |||||| |||||||||| ||||||||
seq2  TTTGAAGGGTTTGGTTTGGTTTGATTTTGT-GATTGGTTGT-AACCTTTG  48

seq1  TCATTTGGTGAG-ATCCTAACTGCTTCCAGTGCCCAGCTTTTCATGTGTT  96
      ||| ||| |||| ||||| ||||||||||||| ||||| ||||||||| |
seq2  TCA-TTGATGAGAATCCT-ACTGCTTCCAGTG-CCAGC-TTTCATGTG-T  93

seq1  GTTGATATTATCAGTATTGAGAATAAAGTATTAGTGTATGAAGGAAAAGC  146
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  GTTGATA-TATCAGTATTGAGAAT-AAGTATTAGTGTATGAAGGAAAAGC  141

seq1  TGAGTTACAATTCTCAGATTATAAAACAATCTCATCTGGATATGTAGTTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACAATTCTCAGATTATAAAACAATCTCATCTGGATATGTAGTTT  191

seq1  CCTTGAAG-AAAGCACAGTCTTCATCTAGTGTAGTTTTAGGAAATTTCTA  245
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAGAAAAGCACAGTCTTCATCTAGTGTAGTTTTAGGAAATTTCTA  241

seq1  GCTTCAATGTTTTATAATTTCTGGGCCCCATATGGTGAAAAGTGGAGTAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAATGTTTTATAATTTCTGGGCCCCATATGGTGAAAAGTGGAGTAG  291

seq1  TAGCTTAATATTCCATTAAGTCATGGTCACACATGCTTCTCTCAGTAGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTAATATTCCATTAAGTCATGGTCACACATGCTTCTCTCAGTAGTT  341

seq1  GACACTAGACGTTTAGCCTCCAGTTTATATTTATTAAACTCAAAGTCACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAGACGTTTAGCCTCCAGTTTATATTTATTAAACTCAAAGTCACT  391

seq1  CTGTGTTTTAACACAGCTAAAATAAATTTTGGTATTGAGTTGATGACATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTTAACACAGCTAAAATAAATTTTGGTATTGAGTTGATGACATG  441

seq1  AAATCACAATTGTAAACTTTTTAAAATTATATACTATTATACCAGCTGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAATTGTAAACTTTTTAAAATTATATACTATTATACCAGCTGAA  491

seq1  ATATTTGTTTTAACAGTAAAAACTTCTTTGCTACCTTCAAGCTATAGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTTTAACAGTAAAAACTTCTTTGCTACCTTCAAGCTATAGTTA  541

seq1  AAGAGATGTAATGGTTTTCACACATGAAGTCAGTTAATTTCTGTGAAAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATGTAATGGTTTTCACACATGAAGTCAGTTAATTTCTGTGAAAAA  591

seq1  TGTAGGGAATTTAGTCTTTCTTTTATGTACATTACATGAAATTATTTCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGAATTTAGTCTTTCTTTTATGTACATTACATGAAATTATTTCAA  641

seq1  AATAAAATTGAGCATGGACTGGCAGCCTATTATCTTAGTGATTGGGAGAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTGAGCATGGACTGGCAGCCTATTATCTTAGTGATTGGGAGAC  691

seq1  AGAGGAAGATGGGTAGAAGTTCACGACCATCCTTACTTATATTGTCAATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGATGGGTAGAAGTTCACGACCATCCTTACTTATATTGTCAATT  741

seq1  CTGTAGGCATAATGTCAAAACTGTAAACTAGAAAAACAAGTATTTTCCCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCATAATGTCAAAACTGTAAACTAGAAAAACAAGTATTTTCCCC  791

seq1  AAGGTTTTAATTAGTATGTTTGAAATTAGTCCCCACTTACTAAGCAAGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTAATTAGTATGTTTGAAATTAGTCCCCACTTACTAAGCAAGAA  841

seq1  ATCACATAGAAATAACATATGTGACCATCTCTAAAATAAAAATAATAAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATAGAAATAACATATGTGACCATCTCTAAAATAAAAATAATAAAT  891

seq1  ATTTATAAATACATACTAAAAAGATAGATAATATAAATAAATATATAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATACATACTAAAAAGATAGATAATATAAATAAATATATAAAA  941

seq1  TAATAGAATAATATTATAAATAATAAGTAATGAATTTTAAATAAAATAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAATAATATTATAAATAATAAGTAATGAATTTTAAATAAAATAAA  991

seq1  GAAATAAATACTATATTAACTATTCTCATGAATTTGATATGGTATCAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATACTATATTAACTATTCTCATGAATTTGATATGGTATCAAAA  1041

seq1  GATTAAATATAAATATATGATTTTTCTTTAAGCATTATAATAGAGTTAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATATAAATATATGATTTTTCTTTAAGCATTATAATAGAGTTAAA  1091

seq1  ATGTTGTATTCTCGATGAGAATTC  1119
      ||||||||||||||||||||||||
seq2  ATGTTGTATTCTCGATGAGAATTC  1115