BAC Information

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BAC

Clone NameB6Ng01-346P02
Chromosome14 (Build37)
Map Location 42,324,398 - 42,324,937
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729
Downstream geneLOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346P02.bB6Ng01-346P02.g
ACCGA128698GA128699
length9121,211
definitionB6Ng01-346P02.b B6Ng01-346P02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcaaacttctttttttttttttgttttgaaaaggtttattt
atttttattacattttttatacaatatattttgatcatactctttcacct
ccccaacttctcctaactcttcacctccatagctatctttctctcttttt
ccaaaaaagtcgaaagcaaacaaatttgttttatgtgtatggctgtttgc
ctacatgaatacatgtgtaccaggagcttatctggtgccctcagaggcca
gaagaaggtgtcacatcttctggaactgctggaaactgagcccaggtcct
ctgcaagagcaacaagcactcttttttttttttccattttttattaggta
tttaactcatttacatttccaatgctataccaaaagtcccccatatccac
ccacccccactcccctgcccacccactccccctttttggccctggtattc
ccctgtactggggcatataaagtttgcaagtccaatgggcctctctttcc
agtgatggccgactaggccatcttttgatatatatgcagctagagtcaag
agctccggggtactggttagctcataatgttgttccacctatagggttgc
agatccctttagctccttggctactttctctagctcctccattgggagcc
ctatgatccatccatttagctgactgtgagcatccacttctgtgtttgct
gggccccggcatagtctcacaagagacagctacatctgcgtcctttcaat
aaaatctttgctagtgtatgcaatggtgtcagcgtttgggatgctgatta
tggggtggatccctggctatggcagtcgctacatggtccatccttttcat
ctcagctccaacaaaacttctatgatagtgaaagactgtgggaaatccct
agggaattggaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctcggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaggtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggaaccaccccataaat
cagcatccaaacgctgacaccattgcataccctagcaagattttattgaa
aggacccagatgtagctatctcttctgagactatgcccgggggcctagca
aacacagaagtgggatgcttcacagtcacctaatggatggatcacagggc
tcccaatggaaaggagctagtgaaagaaccgaagagctaaaggtgatctt
gcaacccttattagttgatcacattatggatctaccagtaacccggagct
ctgaccctctagctgcattatgttatcaaaagatgggctatcgcatcact
ggaaggagaggccaattgaaccgtactttatttgccccgagtatcagtaa
gtccaagtccataagggaatgcttgttaacgtaacttcctatatatactc
gtctctagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42324398_42324937
seq2: B6Ng01-346P02.b_412_957 (reverse)

seq1  TCCAATT-CCTAGGGATTT-CCACAGTCTTTCACTATCATAGAAGTTTTG  48
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  TCCAATTCCCTAGGGATTTCCCACAGTCTTTCACTATCATAGAAGTTTTG  50

seq1  TTGGAGCTGAGATG-AAAGGATGGACCATGTAGCGACTGCCATAGCCAGG  97
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGAGATGAAAAGGATGGACCATGTAGCGACTGCCATAGCCAGG  100

seq1  GATCCACCCCATAATCAGCAT-CCAAACGCTGACACCATTGCATACACTA  146
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATCCACCCCATAATCAGCATCCCAAACGCTGACACCATTGCATACACTA  150

seq1  GC-AAGATTTTATTGAAAGGACGCAGATGTAGCTGTCTCTTGTGAGACTA  195
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGATTTTATTGAAAGGACGCAGATGTAGCTGTCTCTTGTGAGACTA  200

seq1  CGCCGGGGCCCAGCAAACACAGAAGTGGATGCTCACAGTCAGCT-AATGG  244
       ||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCCGGGGCCCAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAAATGG  250

seq1  ATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGC  300

seq1  TAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAGCTAACCAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAGCTAACCAGT  350

seq1  ACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGT  400

seq1  CGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCC  450

seq1  CCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGG  500

seq1  AGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCATTGGAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCATTGGAAA  546