BAC Information

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BAC

Clone NameB6Ng01-346P12
Chromosome14 (Build37)
Map Location 111,475,087 - 111,476,195
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
Downstream geneSlitrk5, LOC100043501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346P12.b
ACCGA128716
length1,107
definitionB6Ng01-346P12.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatattgtttttttctattactcgttcctctatccattgcct
tcacacttctaccttctgccattcaggggccatgtctgctgttttgcctc
ttccttggattttaatataatgagtcagtgttgtgttgtatatgtccttc
tgtttgtggtcatatacctggagtgttaaacctaacggcggccacaccca
tgaagggtagattccccctatccaaacacctatcgagtataaatagctca
taatgaagaatctcaattgtatattttgctgctgacaccctctttaattg
aatagccgtaccatataacatgtttgaacatttgaagaaagtgcacgatt
gtttggagccggtattaattaaactcttttacattgctaccaccactgaa
tgaagataccggtgatttccctcattgtgaactcatctatttgactgcag
ttgttattagagtttgtgttttgggtcttggccatcatgtaatatataac
tgaatgtgagtactgtaataggtggatgagagaaatctgcctgtttaagt
ataagaaaagtcactacattgttcccgtaattcttccatttgatttaggt
ccatagtccatatcactattgactaaagtttaaaaagtcattaattgata
aaatgattgttttaacgactctatatgtgactactaagggacaacaatga
atgggtctacagttttatttgattaaatacattttactggaggagatgct
atagcagaggaaaagatattatttgctgataggttttaatagacttgaca
taagattctattcatcaataggacttttactaatttctgatcatctccta
ttaatctacttttcagatctatttgcctgtgaatgtatttgtgcatgttt
gttttaatatgcacatgtgtacatagatgcatacaaacctgttggctgta
tgacatatgtatgtagaagccagagctggatacttcacattacttgtttc
tctttttgtttcttgaagtaacaatttctccctgaaactaggattccaaa
ttcagaattttgaattcttaacattagcttttaagtttatttatttaaaa
tacattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111475087_111476195
seq2: B6Ng01-346P12.b_44_1150

seq1  GAATTCCATATATTGTATTTTTATATTAATCATTCCTCTCTCCATTGCCT  50
      |||||||||||||||| ||||| ||||| || ||||||| ||||||||||
seq2  GAATTCCATATATTGTTTTTTTCTATTACTCGTTCCTCTATCCATTGCCT  50

seq1  TCACACATCTACCTTCTGCCATTCCAAAGCCTACTCAACGTTTTTTCCTC  100
      |||||| |||||||||||||||||    |||   ||  |  |||| ||||
seq2  TCACACTTCTACCTTCTGCCATTCAGGGGCCATGTCTGCTGTTTTGCCTC  100

seq1  TTCCTTTTATTTTAATATAATGAGTCAATAATGTGTTGTATATGTCCTTC  150
      ||||||  ||||||||||||||||||| |  |||||||||||||||||||
seq2  TTCCTTGGATTTTAATATAATGAGTCAGTGTTGTGTTGTATATGTCCTTC  150

seq1  AGTTTGTGGTCATTTACTAAGAGTGTTAAACCTAACAGCAGTCACACCCA  200
       |||||||||||| |||   |||||||||||||||| || | ||||||||
seq2  TGTTTGTGGTCATATACCTGGAGTGTTAAACCTAACGGCGGCCACACCCA  200

seq1  TAAAATGTAGATTCCCTCTATCCAAACAGCTATCAAGTATAAATAGTTCA  250
      | ||  |||||||||| ||||||||||| ||||| ||||||||||| |||
seq2  TGAAGGGTAGATTCCCCCTATCCAAACACCTATCGAGTATAAATAGCTCA  250

seq1  TAAGGTAGTATCTAAATTCAATATTTTGCTGCACACACCAAGTAGAATTG  300
      ||| | || |||| ||||  ||||||||||||  |||||   |  |||||
seq2  TAATGAAGAATCTCAATTGTATATTTTGCTGCTGACACCCTCTTTAATTG  300

seq1  AAGAGCCATACAATATAACATGTTTGACCATTTGAAGAAAATGCACAATT  350
      || |||| ||| ||||||||||||||| |||||||||||| ||||| |||
seq2  AATAGCCGTACCATATAACATGTTTGAACATTTGAAGAAAGTGCACGATT  350

seq1  GTTTGGAGCAGGTATTAATTAAACTCTTTTACATTGCTACCAACAGTAAA  400
      ||||||||| |||||||||||||||||||||||||||||||| || | ||
seq2  GTTTGGAGCCGGTATTAATTAAACTCTTTTACATTGCTACCACCACTGAA  400

seq1  TGAAGATACCAGTGATTTCCCTCATTGTGAACTCTTCTATTTTACTGCAG  450
      |||||||||| ||||||||||||||||||||||| ||||||| |||||||
seq2  TGAAGATACCGGTGATTTCCCTCATTGTGAACTCATCTATTTGACTGCAG  450

seq1  TTGTTATTAGAGTTTGTGTTTTGGGTCTTGGCCATCATGTAATATATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTAGAGTTTGTGTTTTGGGTCTTGGCCATCATGTAATATATAAC  500

seq1  TGAATGTGAGTACTGTAATAGGTGGATGAGAGAAATCTGCCTGTTTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGAGTACTGTAATAGGTGGATGAGAGAAATCTGCCTGTTTAAGT  550

seq1  ATAAGAAAAGTCACTACATTGTTCCCGTAATTCTTCCATTTGATTTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAGTCACTACATTGTTCCCGTAATTCTTCCATTTGATTTAGGT  600

seq1  CCATAGTCCATATCACTATTGACTAAAGTTTAAAAAGTCATTAATTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTCCATATCACTATTGACTAAAGTTTAAAAAGTCATTAATTGATA  650

seq1  AAATGATTGTTTTAACGACTCTATATGTGACTACTAAGGGACAACAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTGTTTTAACGACTCTATATGTGACTACTAAGGGACAACAATGA  700

seq1  ATGGGTCTACAGTTTTATTTGATTAAATACATTTTACTGGAGGAGATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCTACAGTTTTATTTGATTAAATACATTTTACTGGAGGAGATGCT  750

seq1  ATAGCAGAGGAAAAGATATTATTTGCTGATAGGTTTTTAATAGACTTGAC  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATAGCAGAGGAAAAGATATTATTTGCTGATAGG-TTTTAATAGACTTGAC  799

seq1  ATAAGATTCTATTCATCAATAGGACTTTTACTAATTTCTGATTCATCTCC  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAAGATTCTATTCATCAATAGGACTTTTACTAATTTCTGA-TCATCTCC  848

seq1  TATTAATCTACTTTTCAGATCTATTTGCCTGTGAATGTATTTGTGCATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCTACTTTTCAGATCTATTTGCCTGTGAATGTATTTGTGCATGT  898

seq1  TTGTTTTAATATGCACATGTGTACATAGATGCATACAAACCTG-TGGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTGTTTTAATATGCACATGTGTACATAGATGCATACAAACCTGTTGGCTG  948

seq1  TATGACATATGTATGTAGAAGCCAGAGCTGGATACTCGACATTTACTTGT  999
      ||||||||||||||||||||||||||||||||||||  ||| ||||||||
seq2  TATGACATATGTATGTAGAAGCCAGAGCTGGATACTTCACA-TTACTTGT  997

seq1  TTCTCTTTTGTTTTCTTGAAGT-ACAAATTCTCACTGAAACTAGACTTCA  1048
      |||||||||  ||||||||||| |||| ||||| ||||||||||  ||| 
seq2  TTCTCTTTTTGTTTCTTGAAGTAACAATTTCTCCCTGAAACTAGGATTC-  1046

seq1  CAAATTCAG-ATTTTGAATTCTTAACATTAGCTTTTTAAGTTTATTTATT  1097
      ||||||||| |||||||||||||||||||||| |||||||||||||||||
seq2  CAAATTCAGAATTTTGAATTCTTAACATTAGC-TTTTAAGTTTATTTATT  1095

seq1  TAAAATAAATTT  1109
      ||||||| ||||
seq2  TAAAATACATTT  1107