BAC Information

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BAC

Clone NameB6Ng01-347B22
Chromosome14 (Build37)
Map Location 88,142,567 - 88,143,732
singlet/doubletsinglet
Overlap genenone
Upstream geneDiap3, EG665324, Tdrd3
Downstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347B22.bB6Ng01-347B22.g
ACCGA128821GA128822
length1,1441,067
definitionB6Ng01-347B22.b B6Ng01-347B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaatgtgattttactttcttctttttcccaaaatgaatgtt
cccttgtctatagcaactgtgatgacataaaggacataaagcattctgta
tgcccatgtttactaataacatcaaattctttgtagacagcagaggcatg
tttgcattctaagtaaacatactgttatgcttatggtcataaatatatgg
tcataagcatatggtcagtggtgagccactatataatggcatgcccataa
aactatattagggataagaaaatactttttctcagaaaccttgtaacttc
attcctcctgggtgtttttggtagtgtacgtgtgtaagctggctgttccc
tagaatattagaaaattacctttgtcgctcaccttcagcaaacttggata
actaacattcacttttgaactttattcagatggattttcgtgtgatcata
catggtgcaaacaatcaaactagatgctaccctcagcccctcagagagaa
gaaagagatactgatgtcttagttgattggtgagtgtttgaagcaaatta
taacttccacctttttgaagtgtctgctgtgtgtacgataactttcatta
aaagaacactgacttttttttttaacgaaaacttttcttttgtttctctg
gatagaggatatgctccattctaaaccacttgaacacacacattaaaaag
atgccttcctttgtcctgccttctctccaaggcaagcctcaggtggcaat
ttaccatctgtgggcacaggtggagctgagtgtgtcaaacgtcccggaat
gacctgcagaggtgctgggtgtttctatccaatccttttatgttgttggt
tattcccagccactgctagaaggcaaatggtcttgttatatttattaatt
gcctaggcagtgatttaagaataatagtcatgcccttttcattattccta
tgaatgatacatgatttttaatctgtttcagcataaggaaattaccttgt
tacttgtagcataatactgaattatatcattttcttatattaatcaatca
tgaaatggacccatgcctagattagtattagaagttccttaggatttgtg
aatttcagattgacttctctgtcgtacatgctttgtatcaatta

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
gatgccccaaccagtaagaaggacacatgctccactatgttcatagcagc
cttagttataatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatctacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggatggacct
ggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacaca
atatgtactcactgataagtggatattagcccaaaacctaggatacccaa
gatataagatacaatttcctaaactcatgaaactcaagaaaaatcaagac
tgaagtgtggacactatgcccctccttagaaatgggaacaaaacacccat
ggaaggagttacagagacaaagtttggagctgagatgaaaggatggacca
tgtagagactgccatatccagggatccaccccataatcagcatccaaacg
ctgacaccattgcatacactagcaagattttatcgaaaggacccagatgt
agctgtctcttgtgactatgccggggcctagcaaacacagaagtggatgc
tcacagtcagctaatggatggatcacagggctcccaatggaggagctaga
gaaagtacccaaggagctaaagggatctgcaaccctataggtggaacaac
attatgaaccaaccagtaccccggagctctaactctagctgcatatgtat
caaaaagatggcctagtcggtcatcactggaaagagaggctcattggtca
cgcaaactttatatgctccagtacaggggaatgccaggccaaaaagggaa
gtgggttgggttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_88142567_88143732
seq2: B6Ng01-347B22.b_47_1190

seq1  GAATTCAGTAAATGTGATTTTACTTTCTTCTTTTTCCCAAAATGAATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAATGTGATTTTACTTTCTTCTTTTTCCCAAAATGAATGTT  50

seq1  CCCTTGTCTATAGCAACTGTGATGACATAAAGGACATAAAGCATTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCTATAGCAACTGTGATGACATAAAGGACATAAAGCATTCTGTA  100

seq1  TGCCCATGTTTACTAATAACATCAAATTCTTTGTAGACAGCAGAGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGTTTACTAATAACATCAAATTCTTTGTAGACAGCAGAGGCATG  150

seq1  TTTGCATTCTAAGTAAACATACTGTTATGCTTATGGTCATAAATATATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTCTAAGTAAACATACTGTTATGCTTATGGTCATAAATATATGG  200

seq1  TCATAAGCATATGGTCAGTGGTGAGCCACTATATAATGGCATGCCCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGCATATGGTCAGTGGTGAGCCACTATATAATGGCATGCCCATAA  250

seq1  AACTATATTAGGGATAAGAAAATACTTTTTCTCAGAAACCTTGTAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATTAGGGATAAGAAAATACTTTTTCTCAGAAACCTTGTAACTTC  300

seq1  ATTCCTCCTGGGTGTTTTTGGTAGTGTACGTGTGTAAGCTGGCTGTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCTGGGTGTTTTTGGTAGTGTACGTGTGTAAGCTGGCTGTTCCC  350

seq1  TAGAATATTAGAAAATTACCTTTGTCGCTCACCTTCAGCAAACTTGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTAGAAAATTACCTTTGTCGCTCACCTTCAGCAAACTTGGATA  400

seq1  ACTAACATTCACTTTTGAACTTTATTCAGATGGATTTTCGTGTGATCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACATTCACTTTTGAACTTTATTCAGATGGATTTTCGTGTGATCATA  450

seq1  CATGGTGCAAACAATCAAACTAGATGCTACCCTCAGCCCCTCAGAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGCAAACAATCAAACTAGATGCTACCCTCAGCCCCTCAGAGAGAA  500

seq1  GAAAGAGATACTGATGTCTTAGTTGATTGGTGAGTGTTTGAAGCAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGATACTGATGTCTTAGTTGATTGGTGAGTGTTTGAAGCAAATTA  550

seq1  TAACTTCCACCTTTTTGAAGTGTCTGCTGTGTGTACGATAACTTTCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCACCTTTTTGAAGTGTCTGCTGTGTGTACGATAACTTTCATTA  600

seq1  AAAGAACACTGACTTTTTTTTTTAACGAAAACTTTTCTTTTGTTTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACTGACTTTTTTTTTTAACGAAAACTTTTCTTTTGTTTCTCTG  650

seq1  GATAGAGGATATGCTCCATTCTAAACCACTTGAACACACACATTAAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGGATATGCTCCATTCTAAACCACTTGAACACACACATTAAAAAG  700

seq1  ATGCCTTCCTTTGTCCTGCCTTCTCTCCAAGGCAAGCCTCAGGTGGCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCCTTTGTCCTGCCTTCTCTCCAAGGCAAGCCTCAGGTGGCAAT  750

seq1  TTACCATCTGTGGGCACAGGTGGAGCTGAGTGTGTCAAACGTCCCGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATCTGTGGGCACAGGTGGAGCTGAGTGTGTCAAACGTCCCGGAAT  800

seq1  GACCTGCAGAGGTGCTGGGTGTTTCTATCCAATCCTTTTATGTTGTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCAGAGGTGCTGGGTGTTTCTATCCAATCCTTTTATGTTGTTGGT  850

seq1  TATTCCCAGCCACTGCTAGAAGGCAAAATGGTCTTGTTATATTTATTAAT  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATTCCCAGCCACTGCTAGAAGGC-AAATGGTCTTGTTATATTTATTAAT  899

seq1  TGCCTAGGCAGTGATTTAAGAAT-ATAGTCATGCCCTTTTCATTATTCCT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCCTAGGCAGTGATTTAAGAATAATAGTCATGCCCTTTTCATTATTCCT  949

seq1  ATGAAATGATACATGATTTTTAATCTTGTTTCAGCATAAGGAAATTACCT  999
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATG-AATGATACATGATTTTTAATC-TGTTTCAGCATAAGGAAATTACCT  997

seq1  TGTTACTTTGTTAGCATAATTACTGAAATTAATAATCATTTTCTTTATAA  1049
      ||||||||   |||||||| ||||| |||||   ||||||||| ||||| 
seq2  TGTTACTT--GTAGCATAA-TACTG-AATTA--TATCATTTTC-TTATA-  1039

seq1  TTTAATCAATCATGAAAATGGACCCCATG-CTAGATTTAGTATTAGAGTT  1098
       ||||||||||||| ||||||| |||||| ||||| |||||||||||  |
seq2  -TTAATCAATCATG-AAATGGA-CCCATGCCTAGA-TTAGTATTAGAAGT  1085

seq1  TCCTTTAGGGTTTTGTG-ATTTCAGTTTGACATCTCTCTTTTTTCTTTAC  1147
      |||||   || |||||| ||||||| ||||| ||||| |        |||
seq2  TCCTT--AGGATTTGTGAATTTCAGATTGACTTCTCTGT------CGTAC  1127

seq1  AATGGCTTTGTATCAATTA  1166
      |   |||||||||||||||
seq2  A--TGCTTTGTATCAATTA  1144


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