BAC Information

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BAC

Clone NameB6Ng01-347D22
Chromosome14 (Build37)
Map Location 84,265,341 - 84,266,376
singlet/doubletsinglet
Overlap geneLOC100043775
Upstream geneLOC100043773, LOC100043279
Downstream geneLOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347D22.bB6Ng01-347D22.g
ACCGA128907GA128908
length1,0881,207
definitionB6Ng01-347D22.b B6Ng01-347D22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtgaaactcccgtcccgagtttcctcccgggttttttcttcccggatt
ttttctcgtcccggaatttctcgtcccggatttcagcaccaattcttaat
cgcgttctcacgcccggccaggaaagacgcaacagaccagaatcttctgc
ggcaaaactttattgcttacatctttgggagccaggagggcaagcgccca
gcgcccagccccaaaaacgaaagccccttcaataatgaaaccgaaacccc
ttccctctttaggagagttatatttcgcctaggacgcatcactccctgat
tggctgcagcccatggccgagctgacgttcacgggaaaggtagagtacaa
gtagtcataaaatacccttggctcatgcgcagattatttgtttaccactt
agaacacaggatgtcagcgccatcttgtgacggcgaatgtgggggcggct
cccaacaccatctccttcatttaattaatcaacccttttccttagtcctt
agaggataattaaatcagataacctctgaatggactgcttagttgagctt
cttgaaaaatatgcttaatcacaacaattttctccatctttcaggtaaat
gattttattaacagctaaagtaattccagcaattagttaaaattgtcaac
agttggggtattattgtaaagagcctgaaactttccacaaatatatttta
attgacattaatgagtttagactcatattcaaaactatgtaggtttgtta
aatggaaaaaaaaattcaaatcccctaaaattatttagaaatttcaactt
tgaataagtgggaaacaagtaagcaaacatcactaaatacatgcagcaaa
ctcagaagtggtttcggaatcccatatatcttttaatttttttttcatat
aaagcaggaaggagtaataaaacatttttcctataaaaaataaatagtat
ttatcatagtgaaactaatagttgtatgaaaattctag

gaattcaaggcccatacctaaacatgataaaagcaatctaatgcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccacttaa
atcagggaatagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaattcaaacaag
tcaatggcctttctctacataaagaataaacaggctcagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatattaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgatcaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctatagattcaatgcaatccccatcaaatttccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaacaaacc
taggatagcaaaaagtcttctcaaggataaaagaacctcaggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaattgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacaactatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaaaaaagacagcattttcaacaattggtgctga
aacaactgggttgttatcatgtagaagatgcgaatcgatccatacttatc
tccttgtactaaggtcaaatctaagtggaatcaaagaaacttcacataaa
aaccagagaccactgaaccttatagaggagaaagtgggggaaaagccctg
aagaaatggccacagagaaactgccctgaacgaacagcatggcctgtgct
gtaaagatcgagaaattgaccaattggaaacctatatgaaacactctctc
caagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84265341_84266376
seq2: B6Ng01-347D22.b_102_1131 (reverse)

seq1  CTAGAATTTTTCATAC-ACTATTAGTTTCCAATTAATTGATAAATACCTA  49
      |||||| ||||||||| ||||||||||||  | ||  ||||||||| |||
seq2  CTAGAA-TTTTCATACAACTATTAGTTTC--ACTA--TGATAAATA-CTA  44

seq1  TTTA-TTTTTATAGGAAAAATGTTTTTATTTACTTCCTTCCCTGCTTTAT  98
      |||| |||||||||||||||||||||   |||| ||||| ||||||||||
seq2  TTTATTTTTTATAGGAAAAATGTTTT--ATTAC-TCCTT-CCTGCTTTAT  90

seq1  ATGAAAAAAAAATTAAAAGATATATGGGATTCCG-AACCACTTCTGAGTT  147
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGAAAAAAAAATTAAAAGATATATGGGATTCCGAAACCACTTCTGAGTT  140

seq1  TGCTGCATGTATTTAGTGATGTTTGCTTACTTGTTTCCCACTTATTCAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATGTATTTAGTGATGTTTGCTTACTTGTTTCCCACTTATTCAAA  190

seq1  GTTGAAATTTCTAAATAATTTTAGGGGATTTGAA-TTTTTTTTCCATTTA  246
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTGAAATTTCTAAATAATTTTAGGGGATTTGAATTTTTTTTTCCATTTA  240

seq1  ACAAACCTACATAGTTTTGAATATGAGTCTAAACTCATTAATGTCAATTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCTACATAGTTTTGAATATGAGTCTAAACTCATTAATGTCAATTA  290

seq1  AAATATATTTGTGGAAAGTTTCAGGCTCTTTACAATAATACCCCAACTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTTGTGGAAAGTTTCAGGCTCTTTACAATAATACCCCAACTGT  340

seq1  TGACAATTTTAACTAATTGCTGGAATTACTTTAGCTGTTAATAAAATCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTTTAACTAATTGCTGGAATTACTTTAGCTGTTAATAAAATCAT  390

seq1  TTACCTGAAAGATGGAGAAAATTGTTGTGATTAAGCATATTTTTCAAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAAAGATGGAGAAAATTGTTGTGATTAAGCATATTTTTCAAGAA  440

seq1  GCTCAACTAAGCAGTCCATTCAGAGGTTATCTGATTTAATTATCCTCTAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACTAAGCAGTCCATTCAGAGGTTATCTGATTTAATTATCCTCTAA  490

seq1  GGACTAAGGAAAAGGGTTGATTAATTAAATGAAGGAGATGGTGTTGGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAGGAAAAGGGTTGATTAATTAAATGAAGGAGATGGTGTTGGGAG  540

seq1  CCGCCCCCACATTCGCCGTCACAAGATGGCGCTGACATCCTGTGTTCTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCCACATTCGCCGTCACAAGATGGCGCTGACATCCTGTGTTCTAA  590

seq1  GTGGTAAACAAATAATCTGCGCATGAGCCAAGGGTATTTTATGACTACTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAACAAATAATCTGCGCATGAGCCAAGGGTATTTTATGACTACTT  640

seq1  GTACTCTACCTTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTACCTTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCAAT  690

seq1  CAGGGAGTGATGCGTCCTAGGCGAAATATAACTCTCCTAAAGAGGGAAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTGATGCGTCCTAGGCGAAATATAACTCTCCTAAAGAGGGAAGG  740

seq1  GGTTTCGGTTTCATTATTGAAGGGGCTTTCGTTTTTGGGGCTGGGCGCTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCGGTTTCATTATTGAAGGGGCTTTCGTTTTTGGGGCTGGGCGCTG  790

seq1  GGCGCTTGCCCTCCTGGCTCCCAAAGATGTAAGCAATAAAGTTTTGCCGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTTGCCCTCCTGGCTCCCAAAGATGTAAGCAATAAAGTTTTGCCGC  840

seq1  AGAAGATTCTGGTCTGTTGCGTCTTTCCTGGCCGGGCGTGAGAACGCGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTCTGGTCTGTTGCGTCTTTCCTGGCCGGGCGTGAGAACGCGAT  890

seq1  TAAGAATTGGTGCTGAAATCCGGGACGAGAAATTCCGGGACGAGAAAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTGGTGCTGAAATCCGGGACGAGAAATTCCGGGACGAGAAAAAA  940

seq1  TCCGGGAAGAAAAAACCCGGGAGGAAACTCGGGACGGGAGTTTCACCGGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGAAGAAAAAACCCGGGAGGAAACTCGGGACGGGAGTTTCACCGGC  990

seq1  GCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTC  1036
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTC  1030


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