BAC Information

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BAC

Clone NameB6Ng01-347J11
Chromosome14 (Build37)
Map Location 93,133,104 - 93,134,070
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665377, LOC638252
Downstream genePcdh9, LOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347J11.bB6Ng01-347J11.g
ACCGA129149GA129150
length1,225969
definitionB6Ng01-347J11.b B6Ng01-347J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaacccttggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccagactactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaaccaata
ctaggacgggaaccacgccctaggaaaaaaacaggaagaataatccctca
aaaaacttaaaagaaggatagccacaaggaacagaatggccaactttaca
acaaaaataacaggaagcacatacttctaataatcttcttaatatcatgg
actcatcccataaaaagacatagactaaccgaactggctacacaacagga
acccaacattctgctgctacgatccacttcaggaaaagaaggaaccttac
ctctcagagagtaaaagggcgtggg

gaattcagactataaaacttgtgtagccttgagtttccaacaacttaaca
ataaacgtgtgttccttttgtgctacaaactacatggaagtttgttagag
catcaatattaaaagggatttctgggacatcatttgaaggacttctaaca
ggttctaatgatctcagcaaagttaatattgagtatagcatgggagttag
ggaaattttataactatacagtttatgcagatagctgatggaaatagaaa
tattaaattatttttgacatcttaaaagtaattgaaggacatagagtaga
aaatatatattgtctgaaaaaatccaaagatttaaatgtggagttttgac
agaaatataatattgaacatgtgtttgtgcatgaaaggaaaagatgtaca
ttgtggaaagttttttattttaatgtatttggggtattttttatattata
ctatcattacatcattcattctcttagtgcatatatacatagcaaaattg
aaaatgttaaggtaggctggaaagcccaaaaagcctcaaccctatgcaaa
gaattatagtaaagtaagaaatgctgagagtgggagaaataatctttagg
gaagagcatactaactgcttatttctaatatcagaggatcaacactgatg
atataaaacaaggaatcttatacaactgataatgttgcaatttccttatt
taaattacctacatcatcacaatgatgtcactttgatgagtcagtaggta
aatgcccttgctgtatacattagttaaaggtttcccattgctgtgaagag
acactgtgaccaaggtatctctcataaggaacagtatttgattggtgctg
gcttgcagtttcaggggcttagtccattatcatcatggtgggaagcatgg
tagcatttaagcaggcatggtgctgaaggaactgggcatcctacatctct
tgtgttggtggtgggttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93133104_93134070
seq2: B6Ng01-347J11.g_69_1037

seq1  GAATTCAGACTATAAAACTTGTGTAGCCTTGAGTTTCCAACAACTTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTATAAAACTTGTGTAGCCTTGAGTTTCCAACAACTTAACA  50

seq1  ATAAACGTGTGTTCCTTTTGTGCTACAAACTACATGGAAGTTTGTTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACGTGTGTTCCTTTTGTGCTACAAACTACATGGAAGTTTGTTAGAG  100

seq1  CATCAATATTAAAAGGGATTTCTGGGACATCATTTGAAGGACTTCTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATATTAAAAGGGATTTCTGGGACATCATTTGAAGGACTTCTAACA  150

seq1  GGTTCTAATGATCTCAGCAAAGTTAATATTGAGTATAGCATGGGAGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAATGATCTCAGCAAAGTTAATATTGAGTATAGCATGGGAGTTAG  200

seq1  GGAAATTTTATAACTATACAGTTTATGCAGATAGCTGATGGAAATAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTATAACTATACAGTTTATGCAGATAGCTGATGGAAATAGAAA  250

seq1  TATTAAATTATTTTTGACATCTTAAAAGTAATTGAAGGACATAGAGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATTATTTTTGACATCTTAAAAGTAATTGAAGGACATAGAGTAGA  300

seq1  AAATATATATTGTCTGAAAAAATCCAAAGATTTAAATGTGGAGTTTTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATATTGTCTGAAAAAATCCAAAGATTTAAATGTGGAGTTTTGAC  350

seq1  AGAAATATAATATTGAACATGTGTTTGTGCATGAAAGGAAAAGATGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATAATATTGAACATGTGTTTGTGCATGAAAGGAAAAGATGTACA  400

seq1  TTGTGGAAAGTTTTTTATTTTAATGTATTTGGGGTATTTTTTATATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAAAGTTTTTTATTTTAATGTATTTGGGGTATTTTTTATATTATA  450

seq1  CTATCATTACATCATTCATTCTCTTAGTGCATATATACATAGCAAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTACATCATTCATTCTCTTAGTGCATATATACATAGCAAAATTG  500

seq1  AAAATGTTAAGGTAGGCTGGAAAGCCCAAAAAGCCTCAACCCTATGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTAAGGTAGGCTGGAAAGCCCAAAAAGCCTCAACCCTATGCAAA  550

seq1  GAATTATAGTAAAGTAAGAAATGCTGAGAGTGGGAGAAATAATCTTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATAGTAAAGTAAGAAATGCTGAGAGTGGGAGAAATAATCTTTAGG  600

seq1  GAAGAGCATACTAACTGCTTATTTCTAATATCAGAGGATCAACACTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCATACTAACTGCTTATTTCTAATATCAGAGGATCAACACTGATG  650

seq1  ATATAAAACAAGGAATCTTATACAACTGATAATGTTGCAATTTCCTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAACAAGGAATCTTATACAACTGATAATGTTGCAATTTCCTTATT  700

seq1  TAAATTACCTACATCATCACAATGATGTCACTTTGATGAGTCAGTAGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACCTACATCATCACAATGATGTCACTTTGATGAGTCAGTAGGTA  750

seq1  AATGCCCTTGCTGTATACATTAGTT-AAGGTTTCCCATTGCTGTGAAGAG  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATGCCCTTGCTGTATACATTAGTTAAAGGTTTCCCATTGCTGTGAAGAG  800

seq1  ACACTGTGACCAAGGTATCTCTCATAAGGAACAGTATTTGATTGGTGCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGACCAAGGTATCTCTCATAAGGAACAGTATTTGATTGGTGCTG  850

seq1  GCTTGCAGTTTCAGGGGCTTAGTCCATTATCATCATGGTGGGAAGCATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGTTTCAGGGGCTTAGTCCATTATCATCATGGTGGGAAGCATGG  900

seq1  TAGCATTTAAGCAGGCATGGTGCTGAAGGAACTGGGCATCCTACATCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTAAGCAGGCATGGTGCTGAAGGAACTGGGCATCCTACATCTCT  950

seq1  TGTGGTGGTGGT-GGTTGT  967
      |||| ||||||| ||||||
seq2  TGTGTTGGTGGTGGGTTGT  969


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