BAC Information

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BAC

Clone NameB6Ng01-349G18
Chromosome14 (Build37)
Map Location 104,241,948 - 104,243,082
singlet/doubletsinglet
Overlap geneEdnrb
Upstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1
Downstream genePou4f1, 2610206B13Rik, D130009I18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349G18.bB6Ng01-349G18.g
ACCGA130419GA130420
length1,1401,230
definitionB6Ng01-349G18.b B6Ng01-349G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctttcctaacagatctccaataatgacaatggcactacctgg
aaagctacacttgtcagaggctaagaaaacccgcaggaaaatctcgttca
aattcaattgtcactattggcagaggagcagtctccttgagaaagtgtct
aaccccccccccccaccaccaccaatactttaaagattgccactttacca
ctcagcttacaaccccacctttggtttccagatcctcacatcgttcgtta
tctggtacattaccttgtaggtgttaatgggtatgtctatgatgatgtgc
agtaggtctcccagagccagactggcgatcaagatattgggaccattgcg
catgcacttgttcttgtatatgattcttagcagcgtggagttccggatga
tgcctagcacgaacacgaggcacgacacaatcgtgttgatgtatttaaaa
ttcttgctgatctcaatatttcgttggcacggaggagggaaggatcttgg
cgggactccaacccccctccctcctttggtctcctccacaggtgcggagg
aacgcatcaaactggagttggaacctctggtccaggaggtcttagtgggt
ggcgtcactacctctttaatcccgagtactgacagcgtggcttgtgcagg
tgggaatcctcttttctctccccatacccctaagaagccacaggccagca
gctgcgccaccaaggcgcgtccgcaccggcttgcgggccattgcatgtta
cagcttgctactgtaacagtctggtaaccgctcggctgttttcagtctat
agaccaactgggggagtgaatacccgactattatctaagctacccaacct
agcctcttgaagactccctgacccggttgcctcttctcgcgccatacaga
taactaattttgcgcaccagtgggggacttagggcgcacgcctacccgct
ggtctgtattcagatttctcccggacactgctcgccgagatttattacca
agaccgtgccgagacagacggtgagggaggagcatttcgggcaggggggg
tcagaactgggggagggtggcgtggtccaatgaaggaaccactcttatgg
gccggggagaagcatgccctattttagctagctttgggga
gaattctcacctgaggaataccgaatgggagagaatcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaagatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacccaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttttattgaa
aggacgcagatgtagcttgtcttcttgtgagactatggccggggcccagc
aaacacagaagtggatgctcacagttcagcttatggattggttcataggg
ctcccaatggaaggagctagagaaagtagccaaggagcctaaggggatct
gcaaccctataggtggaacaacatttatggagctaaccagttaccccgga
gcctctggacttctagcctgcatatatattcaaagtatgggccttagtcg
gccatcacttggtaaaaggagagtccaattgggacttgacaactctttat
ataggccagatatcacggaattatcaaggcctcaaaagggggaaaggggt
tggtcagtggtgaatgtggtgaggtggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_104241948_104243082
seq2: B6Ng01-349G18.b_44_1183

seq1  GAATTCTTCTTTCCTAACAGATCTCCAATAGTAACAATGTCACTACCTGG  50
      |||||||||||||||||||||||||||||| | |||||| ||||||||||
seq2  GAATTCTTCTTTCCTAACAGATCTCCAATAATGACAATGGCACTACCTGG  50

seq1  AAAGCTACACTTGTCAGAGGCTAAGAAAACCCGCAGGAAAATCTCGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACACTTGTCAGAGGCTAAGAAAACCCGCAGGAAAATCTCGTTCA  100

seq1  AATTCAATTGTCACTATTGGCAGAGGAGCAGTCTCCTTGAGAAAGTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATTGTCACTATTGGCAGAGGAGCAGTCTCCTTGAGAAAGTGTCT  150

seq1  AACCCCCCCCCCCCACCACCACCAATACTTTAAAGATTGCCACTTTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCCCCCCCACCACCACCAATACTTTAAAGATTGCCACTTTACCA  200

seq1  CTCAGCTTACAACCCCACCTTTGGTTTCCAGATCCTCAGATCGTTCGTTA  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCAGCTTACAACCCCACCTTTGGTTTCCAGATCCTCACATCGTTCGTTA  250

seq1  TCAGGTACATTACCTTGTAGGTGTTAATGGGTATGTCTATGATGATGTGC  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACATTACCTTGTAGGTGTTAATGGGTATGTCTATGATGATGTGC  300

seq1  AGTAGGTCTCCCAGAGCCAGACTGGCGATCAAGATATTGGGACCATTGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTCTCCCAGAGCCAGACTGGCGATCAAGATATTGGGACCATTGCG  350

seq1  CATGCACTTGTTCTTGTAGATGATTCTTAGCAGCGTGGAGTTCCCGATGA  400
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  CATGCACTTGTTCTTGTATATGATTCTTAGCAGCGTGGAGTTCCGGATGA  400

seq1  TGCCTAGCACGAACACGAGGCACGACACAATCGTGTTGATGTATTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGCACGAACACGAGGCACGACACAATCGTGTTGATGTATTTAAAA  450

seq1  GTCTTGCTGATCTCAATATTTCGTTGGCACGGAGGAGGGAAGGATCTTGG  500
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTGATCTCAATATTTCGTTGGCACGGAGGAGGGAAGGATCTTGG  500

seq1  CGGGACTCCAGCCCCCCTCCCTCCTTTGGTCACCTCCGCAGGTGCGGAGG  550
      |||||||||| |||||||||||||||||||| ||||| ||||||||||||
seq2  CGGGACTCCAACCCCCCTCCCTCCTTTGGTCTCCTCCACAGGTGCGGAGG  550

seq1  AACGCATCAGACTGGAGTTGGAACCTCTGGTCCAGGAGGTCTTAGTGGGT  600
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATCAAACTGGAGTTGGAACCTCTGGTCCAGGAGGTCTTAGTGGGT  600

seq1  GGCGTCATTACCTCTTTAGTCCCGAGAAGTGACAGCGTGGCTTGGGCAGG  650
      ||||||| |||||||||| ||||||| | ||||||||||||||| |||||
seq2  GGCGTCACTACCTCTTTAATCCCGAGTACTGACAGCGTGGCTTGTGCAGG  650

seq1  TGGGAATCCTCTTTTCTCTCCCCATACCCCCAAGAAGCCACAGGCCAGCA  700
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGGAATCCTCTTTTCTCTCCCCATACCCCTAAGAAGCCACAGGCCAGCA  700

seq1  GCAGCGCCACCAAGGCGCGTCCGCACCGGCTTGCGGGCGATTGCATGTTA  750
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTGCGCCACCAAGGCGCGTCCGCACCGGCTTGCGGGCCATTGCATGTTA  750

seq1  CAGCTTGCTCCTGTGAGAGTCTGGTAGCCGCTCTGCTGTTTTCAGTCTGG  800
      ||||||||| |||| | ||||||||| |||||| ||||||||||||||  
seq2  CAGCTTGCTACTGTAACAGTCTGGTAACCGCTCGGCTGTTTTCAGTCTAT  800

seq1  AGACCAACT-GGGGAGTGAAGACAGGACACTTAAGTCAGCTACCCCAGCC  849
      ||||||||| |||||||||| ||  |||  |||  | ||||| |||| ||
seq2  AGACCAACTGGGGGAGTGAATACCCGACTATTATCTAAGCTA-CCCAACC  849

seq1  AAGCCTC-TGAAAACACACTAGCCCGGTTGCCTCTACCCGCGCCTTAACA  898
       |||||| |||| || | ||  ||||||||||||| | |||||| | |||
seq2  TAGCCTCTTGAAGACTCCCTGACCCGGTTGCCTCTTCTCGCGCCAT-ACA  898

seq1  GTAAGTTAAGTTTGCGCGCCAGTGGGGAACTT-GGGCGCACGCC-ACCCG  946
      |  |  ||| ||||||| ||||||||| |||| ||||||||||| |||||
seq2  GATAACTAATTTTGCGCACCAGTGGGGGACTTAGGGCGCACGCCTACCCG  948

seq1  CTGGTCTGCATTCAGTCTCCTCCCGGACCCTGCTCGCAGAGTTTTAATCC  996
      |||||||| ||||||  | ||||||||| |||||||| ||| |||| | |
seq2  CTGGTCTGTATTCAGATTTCTCCCGGACACTGCTCGCCGAGATTTATTAC  998

seq1  CCAG-CCCTGCCGTAGACCAGTCGGTG-GGGAGGAGCA-TTCGGGCAGGG  1043
      | || || ||||| ||| ||| ||||| |||||||||| |||||||||||
seq2  CAAGACCGTGCCG-AGA-CAGACGGTGAGGGAGGAGCATTTCGGGCAGGG  1046

seq1  GGTGTTCCAG-ACT-GGGGAGGGT-GCGTGTCCCAATGAAAGAA-CACTC  1089
      || ||  ||| ||| ||||||||| |||||  |||||||| ||| |||||
seq2  GGGGT--CAGAACTGGGGGAGGGTGGCGTGGTCCAATGAAGGAACCACTC  1094

seq1  GTATGTGCCGGGAAGAAGCAAGCCCAATTTTAGCTAAGCTTGGGGA  1135
       |||| |||||| ||||||| |||| ||||||||||   |||||||
seq2  TTATGGGCCGGGGAGAAGCATGCCCTATTTTAGCTAGCTTTGGGGA  1140