BAC Information

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BAC

Clone NameB6Ng01-350H23
Chromosome14 (Build37)
Map Location 9,290,080 - 9,291,235
singlet/doubletsinglet
Overlap gene4930452B06Rik
Upstream geneLOC100042286, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005
Downstream geneLOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350H23.bB6Ng01-350H23.g
ACCGA131148GA131149
length1,1761,146
definitionB6Ng01-350H23.b B6Ng01-350H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actcatcaacaagatcatttagtgtgattgggcttccttccaaacatgat
agacttacaagacatgtcttagtttgggtttctactgctgtgctaaaaca
ccatgaccaaaatcatgggaaaatgggcttatttcatcttacaagttgta
gcatgttattcagagaagtcagagcagaatctcaaggcaggaactgaaac
agaggccatagaggggtgctgcctagtgctttgttccccatggcctgctc
agcctgattccttctagcatccaggaccacctgcccagggggggcacctc
ccgtggtgaacgggtcagtctgatgggggaatgttctcaattcaggttcc
cttccaaaatgagttgagcttgtgttcccttgatataaaacttgccagcg
caacatatctgtcaatcagattgatgcaggaaggacctttcacaaaatta
agtattgctacaggatgaaagtctaaaggaagttggactaagaggaacag
acatcaatataaaaaaataaataaatatgacagactggtagccaacatta
ttttaagtaaaagccaaactttaaaatttgcctggaattagaaatgagat
gagtttatcttttttctctactcccattccatatagtgcttgaagggtta
gcgtgataaggaaaagggaaagacacaaaagagaagtcaaagtaactgtt
tgcatataatataatcctgtgtgtaagagaccctaaagagtccaccagaa
aacttaaaattggtaaacctgaactaacagaatataagatagacatagaa
aaatcagtaatttctgaaagaacatggaagtagaaaaggctcagaatatc
caaagcaaacatgaatgaacagaacatgttggtgatgtcacaatgcctga
cttctgggtcacactatagaaccagggtaacaagagcaaaaccaaatctg
tgaatcaccgtaatagatcaagggccccaaatttaacccttcacaggtac
agacgtctcatattcaagaaggtgctaaaagcatgcatgagaaaatgctt
ctttacaatgtagagaaaactggatatctaatgtaaaggaagactctaga
cccatattgctagtcgtataaaagtctattcatacaggtcttaagatcta
agtgttaggaacttcagttctcctgg
gaattcaggataatcttcactcatgtaatgcgttcagagattgcctgagt
ctgtctgtctgtctgtctgtctgtggctctctctttaataaaaaaccctg
tcacaaacaataaacaaaaaatatgggaacatatttatatttatgacagg
aataaatcagtgaatgggtaagcaattaggcaatacttatcaaattatct
tttaccgctgggcagtggtggtgcatgcctttaatcccagcacttgggag
gcagaggcaggtggatttctgagttcgaggccagcctggtttacagagtg
agttccaggacagccagggctacacagagaaaccctgtctcaaacaaaca
aacaaacaaacaaacaaacaattatcttttgcccgaggaattctctggct
agaaatttacagtggccttcataagaaaagttcatgaccatgttggctct
cgttcccttggcaataacaaacatgtggaaaccacctagatgtccggatc
cagccaaatgaggaagggattcctagaagcttgtgaaaaataagtcaata
caaattcagaaagatgctcaggacctactaactgaaagttcccagaggaa
gtggtgcagaggctaggactatccccatccacaaacaaaaggccatataa
gctgtgtctcctagtatgcgcataggaagtttttacatgttaggtgtcta
agacactgttactcaccattacacctgtcagtaaaaacgaggggctacac
atctttttttattctcttttctaattttagctgcactttggttttgtagt
gcaggcattattattgttgttgttttggtgctggggatagaatcaggctt
tcctcttgctacacaagtacccaaccactcagctccatgtatagccctag
gctctttctatcttaacattagcatctctctctctaggatccttcaccat
gatgagatctgcaagtcttctgacgtatctaacaacatccagtggtcgag
atagtgagcaagtgcttgcttgctggcaccagctttatagaccatctact
gatgggaaggacagggaaatcagttgccttctcactgtcactctgcacat
tagccagtctagtgacctgcctcacttgatgggaatggacttccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9290080_9291235
seq2: B6Ng01-350H23.g_66_1211

seq1  GAATTCAGGATAATCTTCACTCATGTAATGCGTTCAGAGATTGCCTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATAATCTTCACTCATGTAATGCGTTCAGAGATTGCCTGAGT  50

seq1  CTGTCTGTCTGTCTGTCTGTCTGTGGCTCTCTCTTTAATAAAAAACCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGTCTGTCTGTCTGTGGCTCTCTCTTTAATAAAAAACCCTG  100

seq1  TCACAAACAATAAACAAAAAATATGGGAACATATTTATATTTATGACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACAATAAACAAAAAATATGGGAACATATTTATATTTATGACAGG  150

seq1  AATAAATCAGTGAATGGGTAAGCAATTAGGCAATACTTATCAAATTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCAGTGAATGGGTAAGCAATTAGGCAATACTTATCAAATTATCT  200

seq1  TTTACCGCTGGGCAGTGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCGCTGGGCAGTGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAG  250

seq1  GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTG  300

seq1  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAACAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAACAAACA  350

seq1  AACAAACAAACAAACAAACAATTATCTTTTGCCCGAGGAATTCTCTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAACAATTATCTTTTGCCCGAGGAATTCTCTGGCT  400

seq1  AGAAATTTACAGTGGCCTTCATAAGAAAAGTTCATGACCATGTTGGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTACAGTGGCCTTCATAAGAAAAGTTCATGACCATGTTGGCTCT  450

seq1  CGTTCCCTTGGCAATAACAAACATGTGGAAACCACCTAGATGTCCGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCTTGGCAATAACAAACATGTGGAAACCACCTAGATGTCCGGATC  500

seq1  CAGCCAAATGAGGAAGGGATTCCTAGAAGCTTGTGAAAAATAAGTCAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAATGAGGAAGGGATTCCTAGAAGCTTGTGAAAAATAAGTCAATA  550

seq1  CAAATTCAGAAAGATGCTCAGGACCTACTAACTGAAAGTTCCCAGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCAGAAAGATGCTCAGGACCTACTAACTGAAAGTTCCCAGAGGAA  600

seq1  GTGGTGCAGAGGCTAGGACTATCCCCATCCACAAACAAAAGGCCATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCAGAGGCTAGGACTATCCCCATCCACAAACAAAAGGCCATATAA  650

seq1  GCTGTGTCTCCTAGTATGCGCATAGGAAGTTTTTACATGTTAGGTGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCTCCTAGTATGCGCATAGGAAGTTTTTACATGTTAGGTGTCTA  700

seq1  AGACACTGTTACTCACCATTACACCTGTCAGTAAAAACGAGGGGCTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGTTACTCACCATTACACCTGTCAGTAAAAACGAGGGGCTACAC  750

seq1  ATCTTTTTTTATTCTCTTTTCTAATTTTAGCTGCACTTTGGTTTTGTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTTATTCTCTTTTCTAATTTTAGCTGCACTTTGGTTTTGTAGT  800

seq1  GCAGGCATTATTATTGTTGTTGTTTTGGTGCTGGGGATAGAATCAGGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCATTATTATTGTTGTTGTTTTGGTGCTGGGGATAGAATCAGGCTT  850

seq1  TCCTCTTGCTACACAAGTACCCAACCACTCAGCTCCATGTATAGCCCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCTACACAAGTACCCAACCACTCAGCTCCATGTATAGCCCTAG  900

seq1  GCTCTTTCTATCTTAACATTAGCATCTCTCTCTCTAGGATCCTTCACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCTATCTTAACATTAGCATCTCTCTCTCTAGGATCCTTCACCAT  950

seq1  GATGAGATCTGCAAGTCTTCTGACGTATCTAACAACATCCAGTGGCCGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATGAGATCTGCAAGTCTTCTGACGTATCTAACAACATCCAGTGGTCGAG  1000

seq1  ATTAAGGTGAGCAAGTGCTTGCTTGCTGGCACCAGGCTTTATAGACCCAT  1050
      ||    |||||||||||||||||||||||||||| |||||||||| ||||
seq2  AT---AGTGAGCAAGTGCTTGCTTGCTGGCACCA-GCTTTATAGA-CCAT  1045

seq1  CTACTGATGGGAAGGGACA-GGAAATCAGGTTGCCTTTCTCACTGTCACC  1099
      ||||||||||||| ||||| |||||||| |||||| ||||||||||||| 
seq2  CTACTGATGGGAA-GGACAGGGAAATCA-GTTGCC-TTCTCACTGTCAC-  1091

seq1  TCCTGCCACATAAGCCAAGGTTCTAGTGGCCTGCCTCACTTGATGG--AT  1147
        ||| ||||| |||||    ||||||| |||||||||||||||||  ||
seq2  -TCTG-CACATTAGCCA---GTCTAGTGACCTGCCTCACTTGATGGGAAT  1136

seq1  GGAC-TCCAG  1156
      |||| |||||
seq2  GGACTTCCAG  1146