BAC Information

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BAC

Clone NameB6Ng01-350I19
Chromosome14 (Build37)
Map Location 45,706,471 - 45,794,801
singlet/doubletdoublet
Overlap geneLOC100041591, 5730420B22Rik
Upstream geneEG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2
Downstream geneLOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350I19.bB6Ng01-350I19.g
ACCGA131186GA131187
length1,2121,115
definitionB6Ng01-350I19.b B6Ng01-350I19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,706,471 - 45,707,390)(45,793,672 - 45,794,801)
sequence
gaattcactggttgtcagtgaccttcaggttcaatgagggatcctaacca
aaaaaaataaaataaggtggagtatttagagctggagaaatggcccaggg
atgatgagcactggctactcttctagaagacctaggtttgattcacagca
aggacttgatgctcacagatatttgaaaccccagtccagtgttgttcagc
agtttcctctgagatgaaaacattccatctggaagggaagcgccttaaaa
ctgaaagtaaaccactcaaaagagcttcaagaattccctgaaactgacca
gattcactgggcccctccttctcaagaaaaatcctgctgagagttactcc
caggcaagccaagcttccaagaggatactctgaggccaatcaaagagcat
ggaagaagcagaaatcagctgagctgcctgggagaagttcacaccaaccg
aagcatctggaaaggatgttctccaacctgttgagctgcctgtgtgctgt
cctttgtgatcctgggcctcaactttcatgagctggcaccaatgctgggg
tgggctttcgtggtgcagctgtctggagtcagttatcttttattcatatt
ctagtaagtaaccacaataaaacacatttgttcaccaagtttgactttag
tttgtcatgggctccatatcctggggagtagattgtgtgttgcatctctc
caggaaatgtctgtcacacaacacccagggggtctgacagcctcttctgg
ccaccatggtaccaggcacatacttacataccaaacaaacacccataccc
ataaaaataagtagatggatggattaataaataaggtggagaagttgaga
aagacactaacattgggtctctagactccacaaatgtacccacatgtatg
tgtacacacacacacacacacacacacacacacacacacacacacacaca
cttgcacatgagcacacacaaaagcacataaatgtgttatagaaatattt
ctgtaaaaggcactctgacacctgtagagtaaaaataggagatattatca
tggagaggtaaaaaaaaactgggcataaaatttcattccctagcagccaa
actggtctctcaagaaagccactgaccatggcaatgatcatgactaggaa
aaattgttctggacagtcagcttctggaattcctggccagagggaattac
aaggccttagaa
gaattccagtagtcaccacatgagagagggtgagacagtgaccaggacaa
taatacagactggttctgtggcttggaggaataagctaagttggagagaa
aagaaatacataaacaaaggaaaagcaaacaaaactctcacttctcctta
gagatcttagcattaaaatacaaaaacaagacaaaaacaaaccaaaaccc
aaaagaggagaatttaggaatcctgagaatttaggaatcctgttccgttt
gaaagggtaaccaatgccagctctgaaatcctggacaggaggtccagagg
cagcttgctgtattttgagctctataaatacacgtggatgtacaaggccc
cagaactgccctcagtacacaggtgagcaactgtgtactcagcctataaa
attattttgtttctcagattttgcatctgcttgaagtcatgggtttcctg
tgaaactttagatgctgttgatggtcaggccgtgatcagtcagcttcagt
ggactgctcctctgatttctaagcctccagttgggcctctttgatataaa
tagaagtcaggcatgagacttaaacactaaaaatatcatttcctgtttga
atttggtgggaaacccttgtgcccttgcctataaaaagttcagaatcacc
tgttttctaaaggtccagcattttgtggagacaaggccttgcctttgact
catcaaaagacctgtttttgcatcccactgagtggcaaaggtttggcaaa
ggacaaggtaatttacaaacagctgaagattttgttttgatgctatgagg
atgaagtgtacctccttgagtgcgtatcatatccacctggaagactcatg
tcttgaattatatactgtgggcataaatttggcaggacggtcttttccta
cttttgagttactggtgatgtaaccagcccatgggtccgacttgatcact
aatgacaggtcgctttctccagggtacactgagctacagcagacatcatg
gcgagcagagctgttgaaaatgagcggcagggggcgggggactttttcat
tctgcctcagtatgtgaaagagttatgcttagagctctggaaacagtctt
gcttatctggcatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45706471_45707390
seq2: B6Ng01-350I19.b_350_1255

seq1  CTGGGCCCCTCCTTCTCAAGAAAAATCCTGCTGAGAGTTACTCCCAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCCCTCCTTCTCAAGAAAAATCCTGCTGAGAGTTACTCCCAGGCA  50

seq1  AGCCAAGCTTCCAAGAGGATACTCTGAGGCCAATCAAAGAGCATGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGCTTCCAAGAGGATACTCTGAGGCCAATCAAAGAGCATGGAAGA  100

seq1  AGCAGAAATCAGCTGAGCTGCCTGGGAGAAGTTCACACCAACCGAAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAATCAGCTGAGCTGCCTGGGAGAAGTTCACACCAACCGAAGCAT  150

seq1  CTGGAAAGGATGTTCTCCAACCTGTTGAGCTGCCTGTGTGCTGTCCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGGATGTTCTCCAACCTGTTGAGCTGCCTGTGTGCTGTCCTTTG  200

seq1  TGATCCTGGGCCTCAACTTTCATGAGCTGGCACCAATGCTGGGGTGGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTGGGCCTCAACTTTCATGAGCTGGCACCAATGCTGGGGTGGGCT  250

seq1  TTCGTGGTGCAGCTGTCTGGAGTCAGTTATCTTTTATTCATATTCTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGGTGCAGCTGTCTGGAGTCAGTTATCTTTTATTCATATTCTAGTA  300

seq1  AGTAACCACAATAAAACACATTTGTTCACCAAGTTTGACTTTAGTTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCACAATAAAACACATTTGTTCACCAAGTTTGACTTTAGTTTGTC  350

seq1  ATGGGCTCCATATCCTGGGGAGTAGATTGTGTGTTGCATCTCTCCAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTCCATATCCTGGGGAGTAGATTGTGTGTTGCATCTCTCCAGGAA  400

seq1  ATGTCTGTCACACAACACCCAGGGGGTCTGACAGCCTCTTCTGGCCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCACACAACACCCAGGGGGTCTGACAGCCTCTTCTGGCCACCA  450

seq1  TGGTACCAGGCACATACTTACATACCAAACAAACACCCATACCCATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCAGGCACATACTTACATACCAAACAAACACCCATACCCATAAAA  500

seq1  ATAAGTAGATGGATGGATTAATAAATAAGGTGGAGAAGTTGAGAAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGATGGATGGATTAATAAATAAGGTGGAGAAGTTGAGAAAGACA  550

seq1  CTAACATT-GGTCTCTAGACTCCACAAATGTACCCACATGTATGTGTACA  599
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTGGGTCTCTAGACTCCACAAATGTACCCACATGTATGTGTACA  600

seq1  CACACACACACACACACACACACACACACACACACACACACACACTTGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACTTGCA  650

seq1  CATGAGCACACACAAAAGCACATAAATGTGTTATAGAAATATTTCTGTAA  699
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATGAGCACACACAAAAGCACATAAATGTGTTATAGAAATATTTCTGT-A  699

seq1  AAAAGCACTCTGACACCTGTAAGAGTAAAAAATAGGAGATATTATCAATG  749
      ||| |||||||||||||||| ||||| ||||||||||||||||||||  |
seq2  AAAGGCACTCTGACACCTGT-AGAGT-AAAAATAGGAGATATTATCATGG  747

seq1  AGAGGTAAAAAAAAAAACTGGGCATAAAAATTTCCAATTCCCTAGCAAGC  799
      ||||||  ||||||||||||||||| ||||||||  |||||||||||  |
seq2  AGAGGT--AAAAAAAAACTGGGCAT-AAAATTTC--ATTCCCTAGCAGCC  792

seq1  AAACTGGTCTCCTCAGAGAAAGCCACTGACAATGGGCCATTGATCAATGA  849
      |||||||||| |||| |||||||||||||| ||||  || ||||| ||||
seq2  AAACTGGTCT-CTCA-AGAAAGCCACTGACCATGG--CAATGATC-ATGA  837

seq1  CTTAGGGAAGATATGTCTGGAGCAGGGTCAGCTTCTGGGATACCTGGCCA  899
      | |||| || ||   |||||| ||  |||||||||||| || ||||||||
seq2  C-TAGGAAAAATTGTTCTGGA-CA--GTCAGCTTCTGGAATTCCTGGCCA  883

seq1  GAGGAAATAACAAGGC--TAGAA  920
      |||| ||| |||||||  |||||
seq2  GAGGGAATTACAAGGCCTTAGAA  906

seq1: chr14_45793672_45794801
seq2: B6Ng01-350I19.g_67_1181 (reverse)

seq1  CCATACCAGATAAGCCAAGACTGTTT-CAGAGCTCTTAGCATTAAACTCT  49
      |||| ||||||||| ||||||||||| ||||||||| |||||  ||||||
seq2  CCATGCCAGATAAG-CAAGACTGTTTCCAGAGCTCTAAGCAT--AACTCT  47

seq1  TTCACATTACTGAAGGCAGATGGAAAAAGTCCCCCGCCCCCCTGCCGGCT  99
      |||||| ||||| |||||||  |||||||||||||| ||||||||| |||
seq2  TTCACA-TACTG-AGGCAGAATGAAAAAGTCCCCCG-CCCCCTGCC-GCT  93

seq1  CAATTTTCAAACAGCCTCCTGCTCGGCCATGATGTCCTGCTGTAGCTCAG  149
      | |||||| ||||||   |||||| |||||||||| ||||||||||||||
seq2  C-ATTTTC-AACAGC--TCTGCTC-GCCATGATGT-CTGCTGTAGCTCAG  137

seq1  TGGTACCCCTGGAGGAAAGCGACCTGTCATTAGTGATCAAGTCGGACCCA  199
      | ||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  T-GTA-CCCTGGA-GAAAGCGACCTGTCATTAGTGATCAAGTCGGACCCA  184

seq1  TGGGCTGGTTACATCACCAGTAACTCAAAAGTAGGAAAAGACCGTCCTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGGTTACATCACCAGTAACTCAAAAGTAGGAAAAGACCGTCCTGC  234

seq1  CAAATTTATGCCCACAGTATATAATTCAAGACATGAGTCTTCCAGGTGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTATGCCCACAGTATATAATTCAAGACATGAGTCTTCCAGGTGGA  284

seq1  TATGATACGCACTCAAGGAGGTACACTTCATCCTCATAGCATCAAAACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATACGCACTCAAGGAGGTACACTTCATCCTCATAGCATCAAAACAA  334

seq1  AATCTTCAGCTGTTTGTAAATTACCTTGTCCTTTGCCAAACCTTTGCCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCAGCTGTTTGTAAATTACCTTGTCCTTTGCCAAACCTTTGCCAC  384

seq1  TCAGTGGGATGCAAAAACAGGTCTTTTGATGAGTCAAAGGCAAGGCCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGATGCAAAAACAGGTCTTTTGATGAGTCAAAGGCAAGGCCTTG  434

seq1  TCTCCACAAAATGCTGGACCTTTAGAAAACAGGTGATTCTGAACTTTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACAAAATGCTGGACCTTTAGAAAACAGGTGATTCTGAACTTTTTA  484

seq1  TAGGCAAGGGCACAAGGGTTTCCCACCAAATTCAAACAGGAAATGATATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAGGGCACAAGGGTTTCCCACCAAATTCAAACAGGAAATGATATT  534

seq1  TTTAGTGTTTAAGTCTCATGCCTGACTTCTATTTATATCAAAGAGGCCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTTTAAGTCTCATGCCTGACTTCTATTTATATCAAAGAGGCCCA  584

seq1  ACTGGAGGCTTAGAAATCAGAGGAGCAGTCCACTGAAGCTGACTGATCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGCTTAGAAATCAGAGGAGCAGTCCACTGAAGCTGACTGATCAC  634

seq1  GGCCTGACCATCAACAGCATCTAAAGTTTCACAGGAAACCCATGACTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGACCATCAACAGCATCTAAAGTTTCACAGGAAACCCATGACTTCA  684

seq1  AGCAGATGCAAAATCTGAGAAACAAAATAATTTTATAGGCTGAGTACACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGCAAAATCTGAGAAACAAAATAATTTTATAGGCTGAGTACACA  734

seq1  GTTGCTCACCTGTGTACTGAGGGCAGTTCTGGGGCCTTGTACATCCACGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCACCTGTGTACTGAGGGCAGTTCTGGGGCCTTGTACATCCACGT  784

seq1  GTATTTATAGAGCTCAAAATACAGCAAGCTGCCTCTGGACCTCCTGTCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATAGAGCTCAAAATACAGCAAGCTGCCTCTGGACCTCCTGTCCA  834

seq1  GGATTTCAGAGCTGGCATTGGTTACCCTTTCAAACGGAACAGGATTCCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAGAGCTGGCATTGGTTACCCTTTCAAACGGAACAGGATTCCTA  884

seq1  AATTCTCAGGATTCCTAAATTCTCCTCTTTTGGGTTTTGGTTTGTTTTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCAGGATTCCTAAATTCTCCTCTTTTGGGTTTTGGTTTGTTTTTG  934

seq1  TCTTGTTTTTGTATTTTAATGCTAAGATCTCTAAGGAGAAGTGAGAGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTTTGTATTTTAATGCTAAGATCTCTAAGGAGAAGTGAGAGTTT  984

seq1  TGTTTGCTTTTCCTTTGTTTATGTATTTCTTTTCTCTCCAACTTAGCTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTTTTCCTTTGTTTATGTATTTCTTTTCTCTCCAACTTAGCTTA  1034

seq1  TTCCTCCAAGCCACAGAACCAGTCTGTATTATTGTCCTGGTCACTGTCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAAGCCACAGAACCAGTCTGTATTATTGTCCTGGTCACTGTCTC  1084

seq1  ACCCTCTCTCATGTGGTGACTACTGGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  ACCCTCTCTCATGTGGTGACTACTGGAATTC  1115