Query= MSMg01no046_k13.b1 MSMg01no046_k13.b1 CHROMAT_FILE:
MSMg01no046_k13.b1 PHD_FILE: MSMg01no046_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:52 2005
(596 letters)
>mm_chr14_111815459_111816455
Length = 997
Score = 977 bits (505), Expect = 0.0
Identities = 570/593 (96%), Gaps = 7/593 (1%)
Strand = Plus / Plus
Query: 7 gaattctttatta--t-tcaatggcttcttgtatgttctccccattctggtggagggttc 63
||||||||||||| | | |||||| |||||||||||||||||||||||||||||| ||
Sbjct: 207 gaattctttattaagtat--atggctacttgtatgttctccccattctggtggagggctc 264
Query: 64 aaaattcatgtacaaaaggcagttctgtctaatgctagtgagctgtagaagagaagaaaa 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aaaattcatgtacaaaaggcagttctgtctaacgctagtgagctgtagaagagaagaaaa 324
Query: 124 tgaagaagaaactgtgagtgaattgaagatgagtttgcttttaaaatgttatctgtcatt 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 tgaagaagaaactgtgagtgaattgaagatgagttcgcttttaaaatgttatctgtcatt 384
Query: 184 ctatctgtctgttgcatgattctgaatctctccctgtgtctatatctttgtctgtgtacg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctatctgtctgttgcatgattctgaatctctccctgtgtctatatctttgtctgtgtacg 444
Query: 244 tgtctttgtttgtatttttgccccccaccaaaaggcttccctctctcttttattggattg 303
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 tgtctttgtttgtatttttggcccccacccaaaggcttccctctctcttttattggattg 504
Query: 304 tgcagaaagaatgatgtagagatgagatgaaatccccttagagaaatcgttcgtggggtt 363
||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 505 tgcagaaagaatgatgtggagatgagatgagatccccttagagaaatcgttcgcggggtt 564
Query: 364 ttataccacattaagtcatagactcaactgatccccagtaacctcagtaaaagagaatat 423
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 565 ttataccacattaagtcatagactcaactgatcccaagtaacctcagaaaaagagaatat 624
Query: 424 tatcaatattatttttcaagcaatgtgcatatgtaatactcaacattaggggtggatatt 483
||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 625 tataaatattatttttcaagcaatgtgcatatgtaatattcaacatt-ggggtggatatt 683
Query: 484 aattttataagttttctttcaggttgtaatttctttttcaggaggtaattgccataacac 543
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 684 aattttataagtttgctttcaggttgtaatttctttt-caggaggtaattgccataacac 742
Query: 544 aaatacaaacatgcaaccattgcactagcgtagaggattgagaggacacatga 596
||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 743 aaatacaaacatgcaaccattgcactagcgtaggggattgaaaggacacatga 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_k13.g1 MSMg01no046_k13.g1 CHROMAT_FILE:
MSMg01no046_k13.g1 PHD_FILE: MSMg01no046_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:52 2005
(571 letters)
>mm_chr14_111928031_111929000
Length = 970
Score = 1035 bits (535), Expect = 0.0
Identities = 562/571 (98%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 1 cagggcagccctggataattaatgatattctgtgtcgaaaatcaggttaggggaggtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cagggcagccctggataattaatgatattctgtgtcgaaaatcaggttaggggaggtcaa 711
Query: 61 gttcaggttttatgtttctttacaatgtagaaacatttttgacttttgcattttagaaga 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 710 gttcaggttttatgtttctttacaatgtagaaaca-ttttgacttttgcattttagaaga 652
Query: 121 aactttattcttactatctgtgaattatgaaactttagtgcttaatatttttaaaaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aactttattcttactatctgtgaattatgaaactttagtgcttaatatttttaaaaatgg 592
Query: 181 catttgttgaatggttagagttcatgccttccacagccatgtattttttgcatctattgt 240
||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 591 catgtgttgaatggttagagtttatgccttccacagccttgtattttttgcatctattgt 532
Query: 241 tatatatttaatctgtagatgaattattacctttaaaatttatcttctttgtaagttcct 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 531 tatatatttaatctgtagatgaatcattacctttaaaatttatcttctttgtaagttcct 472
Query: 301 taaaccaagaatcctttatcttctttatatttcaagagaagaagctctaggctctgtaaa 360
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 471 taaaccaagaatcctttatcttctttatatttcaagagaagaaactcgaggctctgtaaa 412
Query: 361 attttcagtgtataaaggatttgtcatatacatgaaaggacataagttacaaccactaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attttcagtgtataaaggatttgtcatatacatgaaaggacataagttacaaccactaaa 352
Query: 421 cacacataaagctaaataccatagcataggtttttaatcccagtactctgaaaaatgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cacacataaagctaaataccatagcataggtttttaatcccagtactctgaaaaatgaga 292
Query: 481 agggatatggaagtgagagaattccccaaagcatatggagcagggagttaggcatagtta 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 291 agggatatggaagtgagagaattccccaaagcttatggagcagggagttaggcatagtta 232
Query: 541 gcagtgaacaaaaagatactgtactgaaaac 571
||||||| |||||||||||||||||||||||
Sbjct: 231 gcagtgagcaaaaagatactgtactgaaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
