Query= MSMg01no047_p18.b1 MSMg01no047_p18.b1 CHROMAT_FILE:
MSMg01no047_p18.b1 PHD_FILE: MSMg01no047_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:25 2005
(690 letters)
>mm_chr14_82885435_82886524
Length = 1090
Score = 1276 bits (660), Expect = 0.0
Identities = 679/686 (98%), Gaps = 1/686 (0%)
Strand = Plus / Plus
Query: 5 gaattcccatagaaatttcctacaaacttacatgcatctttcagatttcatatttagaat 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 206 gaattcccatagaaatttcctacaaacttacatgcatctttcagatttcatatt-agaat 264
Query: 65 ctaatgaaatattttagaaaaattatattttattattacttattttattttgaaatacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaatgaaatattttagaaaaattatattttattattacttattttattttgaaatacaa 324
Query: 125 agtatatttctaaagtatagaagtgagtttgaaaaagacaagaattctgaagatattgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtatatttctaaagtatagaagtgagtttgaaaaagacaagaattctgaagatattgag 384
Query: 185 ggagactgagccaaataacaatgttttgttttgtttttaattttgcttgttttctctaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggagactgagccaaataacaatgttttgttttgtttttaattttgcttgttttctctaaa 444
Query: 245 acatattttatgaaataaggaaaacataaaaaaattaagacagtggaatttatatttaca 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 acatattttatgaaataaggaaaacataaaaaatttaagacagtggaatttatatttaca 504
Query: 305 ggaacatgttgaaaagatttacttcaaatgatagttctattgtatagaaatattcagcgc 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaacatgttgaaaagagttacttcaaatgatagttctattgtatagaaatattcagcgc 564
Query: 365 ttcattttctacttgatagaataaattgtgtttaaagttaagaggtattgcattgctatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcattttctacttgatagaataaattgtgtttaaagttaagaggtattgcattgctatg 624
Query: 425 cagtacttagatataaactcagacttagttactcatattacatatattgtatcattgaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagtacttagatataaactcagacttagttactcatattacatatattgtatcattgaga 684
Query: 485 taataaatacttgccacttttaaaccataatacattgttattatatactaaccatttgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taataaatacttgccacttttaaaccataatacattgttattatatactaaccatttgct 744
Query: 545 tcctagtcatggactaacaattaagcagtanacattgaaacttatttttactaactcgtt 604
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 745 tcctagtcatggactaacaattaagcagtaaacattgaaacttatttttactaactcatt 804
Query: 605 gccaatagtgaataaccattaataaaatgtctaatgaataanattttgtgttgactagat 664
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 805 gccaatagtgaataaccattaataaaatgtctaatgaataaaattttgggttgactagat 864
Query: 665 atttctgtatatggatcatctactct 690
||||||||||||||||||||||||||
Sbjct: 865 atttctgtatatggatcatctactct 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_p18.g1 MSMg01no047_p18.g1 CHROMAT_FILE:
MSMg01no047_p18.g1 PHD_FILE: MSMg01no047_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:25 2005
(658 letters)
>mm_chr14_82909454_82910511
Length = 1058
Score = 1035 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Minus
Query: 124 aggaatgttcttttgaatgctgtgtcatgcatttaatatacattttctcaccaggctcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 aggaatgttcttttgaatgctgtgtcatgcatttaatatacattttctcaccaggctcca 999
Query: 184 ttactatgagactggtaatttttgaagtagaaatatattgtctcattgttttgtactgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ttactatgagactggtaatttttgaagtagaaatatattgtctcattgttttgtactgct 939
Query: 244 tgtggtaattttcataggatccaggcttctgaaaataggttgttggttgtgccttttaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 tgtggtaattttcataggatccaggcttctgaaaataggttgttggttgtgccttttaat 879
Query: 304 ataagacttagcacactgggttacagctcaaaggtggtgcaatgatctaaaaggtctgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ataagacttagcacactgggttacagctcaaaggtggtgcaatgatctaaaaggtctgaa 819
Query: 364 ggaatcccttataggcaagcataagaggaacacagctctcttcaggctatactttctcta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ggaatcccttataggcaagcataagaggaacacagctctcttcaggctatactttctcta 759
Query: 424 cctgtgtgaacagctggcttctgctgagaaagattgatagttttatcaaaagctaaagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 cctgtgtgaacagctggcttctgctgagaaagattgatagttttatcaaaagctaaagaa 699
Query: 484 aatattgtcaatattaagataaccaattttgcaccataagttccagaaatgctgaattta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 aatattgtcaatattaagataaccaattttgcaccataagttccagaaatgctgaattta 639
Query: 544 aaatagtctaataaaaattactctaataagtttaaatgtagataatttatattacggaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aaatagtctaataaaaattactctaataagtttaaatgtagataatttatattacggaaa 579
Query: 604 attattatcctcattaacttatttgctttatttatataaggtaggcaaagcatta 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 attattatcctcattaacttatttgctttatttatataaggtaggcaaagcatta 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
