Query= MSMg01no051_c01.b1 MSMg01no051_c01.b1 CHROMAT_FILE:
MSMg01no051_c01.b1 PHD_FILE: MSMg01no051_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:22 2005
(392 letters)
>mm_chr14_22438763_22439558
Length = 796
Score = 634 bits (328), Expect = 0.0
Identities = 376/396 (94%), Gaps = 8/396 (2%)
Strand = Plus / Plus
Query: 1 ctcttctctgtttatttgtgtgagtcagccatgtatctgccctcatgtttatcacatggt 60
|||||||||| ||||||||||||||||||||| |||||||||||||||| | |||||
Sbjct: 205 ctcttctctg----tttgtgtgagtcagccatgtacctgccctcatgtttataatatggt 260
Query: 61 aaacatttaagaatgagtttgcccttttattaatagtatgtatatattgacattatagaa 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aaacatttaagaatgagcttgcccttttattaatagtatgtatatattgacattgtagaa 320
Query: 121 ggtatagagaatacaaacataaaagaaatataaaggctggggggcaaac----agttacc 176
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 321 ggtatagagaatacaaacataaaagaaatataaaggctgggggacaaacagttagttacc 380
Query: 177 aagaggttcctgcttctactcgcccttttcaagggagcgttctgcaaatgtgtgcgtaac 236
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaggttcttgcttctactcgcccttttcaagggagcgttctgcaaatgtgtgcgtaac 440
Query: 237 cttgagttttcctcttcccaataatagatggtaagcatcctcatgccattgctcgccctc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgagttttcctcttcccaataatagatggtaagcatcctcatgccattgctcgccctc 500
Query: 297 ctaaacatgattttacacaagtcatgttgattaccataacacggagcagggcttccagac 356
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 ctaaacatgattttacacaagtcatgttgagcaccataacacggagcagggcttccagac 560
Query: 357 ctgcttgcgggccctgaataatctttgttggcacga 392
||||||| ||||| ||||||| ||||||||||||||
Sbjct: 561 ctgcttgtgggccatgaataagctttgttggcacga 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 796
Length adjustment: 9
Effective length of query: 383
Effective length of database: 787
Effective search space: 301421
Effective search space used: 301421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_c01.g1 MSMg01no051_c01.g1 CHROMAT_FILE:
MSMg01no051_c01.g1 PHD_FILE: MSMg01no051_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:22 2005
(286 letters)
>mm_chr14_22515991_22516676
Length = 686
Score = 491 bits (254), Expect = e-143
Identities = 266/270 (98%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 17 agcacaggctcccagagtgtggagaaaagg-cccccttccatacgcagggtacagagttc 75
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 632 agcacaggctcccagagtgtggagaaaaggccccccttccatacacagggtacagagttc 573
Query: 76 aagttcccattgtgtgtggccactgtctggcctttggcaaaacattttattgctccagga 135
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 572 aagttcccattgtgtgtggccactgtctggcctttggcaaaacattttattgttccagga 513
Query: 136 ctcggtttcttaattattaaataaaggatgatttcaaaagtccctgtctggctgtaatat 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctcggtttcttaattattaaataaaggatgatttcaaaagtccctgtctggctgtaatat 453
Query: 196 acagttcttttaaaatcatcctatttaataaattaggctttattaggttcaagcacatac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acagttcttttaaaatcatcctatttaataaattaggctttattaggttcaagcacatac 393
Query: 256 ttgtgttattactcttaagtcctttaaatt 285
||||||||||||||||||||| ||||||||
Sbjct: 392 ttgtgttattactcttaagtcatttaaatt 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
