Query= MSMg01no051_h15.b1 MSMg01no051_h15.b1 CHROMAT_FILE:
MSMg01no051_h15.b1 PHD_FILE: MSMg01no051_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:13 2005
(410 letters)
>mm_chr14_40106871_40107680
Length = 810
Score = 706 bits (365), Expect = 0.0
Identities = 396/409 (96%), Gaps = 6/409 (1%)
Strand = Plus / Minus
Query: 1 attccatgtattccttgaggatgtggcagaagctttgttgtttctccagccattttggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 554 attccatgtattccttgaggatgtggcagaagctttgttgtttctccagttattttggtt 495
Query: 61 tgtgagatttcaaatcttacccgtagatttctacaatatatccataatagattgctcatg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgtgagatttcaaatcttacctgtagatttctacaatatatccataatagattgctcatg 435
Query: 121 gtccttctaccttcagtttctctgaccatggttaatactgtatattttcacatctatcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttccttctaccttcagtttctctgaccatggttaatactgtatattttcacatctatcaa 375
Query: 181 aatatcaaaccaattgggggctaaaagtctatttgtgtgagggataaatttcttgaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aatatcaaaccaattgggggctaaaagtctatttgtgtgagggataaatttcttgaataa 315
Query: 241 ttttagggaactgactgtccctgtctgtttttgcctggacctcctctgacttttcccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttttagggaactgactgtccctgtctgtttttgcctggacctcctctgacttttcccttc 255
Query: 301 ttttggattaaacaaaatttt---tttttcttctttgcaccattcctacccatcctgtct 357
||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 254 ttttggattaaacaaaattttaccttt---ttctttgcacaattcctacccatcctgtct 198
Query: 358 ctctctttctctctctccttcttcctctccctctctttctatctctctc 406
|| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 197 ctttctttctctctctctttcttcctctccctctctttctatctctctc 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_h15.g1 MSMg01no051_h15.g1 CHROMAT_FILE:
MSMg01no051_h15.g1 PHD_FILE: MSMg01no051_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:13 2005
(388 letters)
>mm_chr14_39994189_39994975
Length = 787
Score = 681 bits (352), Expect = 0.0
Identities = 379/388 (97%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 acagccagagctacacagagaaactctgtttcgaataaccgaaaagaaaaaacccaaaaa 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 201 acagccagagctacacagagaaactctgtttcgaaaaaccgaaaagaaaaaa-gcaaaaa 259
Query: 61 aaagtagtcaaaggtgtacaaaatatgacttaaataatgccttatccctgaacatgagct 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 260 caagtagtcaaaggtgtacaaaatatgacttaaatcatgccttatccctgaacatgagct 319
Query: 121 gaatatccactgaagctgagccctagggaccattatatagctgactctatttgtgttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatatccactgaagctgagccctagggaccattatatagctgactctatttgtgttgac 379
Query: 181 accaactgacatttaactgggaccaaatatgcactacattataatacaaattcagagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 accaactgacatttaactgggaccaaatatgcactacattataatacaaattcagagaca 439
Query: 241 ctatctaattcaattcttacatctacttgtcattcaataaaatgctgaaaattggatttt 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 440 ctatctaattcaattcttacatctacctgtcattcaataaaatgctgaaaattggatttt 499
Query: 301 attaagactgagctcaagatattttttattatcaatctgttaaataaaagacaaagctga 360
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 attaagactgagctcaagatattttttaaaatcaatctgttaaataaaagacaaagctga 559
Query: 361 cactcagaatcatgtgtctggttgagaa 388
|||||||||||||||||||||||||||
Sbjct: 560 gactcagaatcatgtgtctggttgagaa 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 787
Length adjustment: 9
Effective length of query: 379
Effective length of database: 778
Effective search space: 294862
Effective search space used: 294862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
