Query= MSMg01no052_c03.b1 MSMg01no052_c03.b1 CHROMAT_FILE:
MSMg01no052_c03.b1 PHD_FILE: MSMg01no052_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:39 2005
(674 letters)
>mm_chr14_10510063_10511137
Length = 1075
Score = 1208 bits (625), Expect = 0.0
Identities = 661/673 (98%), Gaps = 1/673 (0%)
Strand = Plus / Plus
Query: 3 cggaattctccttcttccctgtcagttattttcccagaatcctctcctcagttgtacttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattctccttcttccctgtcagttattttcccagaatcctctcctcagttgtacttt 262
Query: 63 aacatatttcatttatgaagggttgccaagaagataaatagactgttaaacctttgatag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacatatttcatttatgaagggttgccaagaagataaatagactgttaaacctttgatag 322
Query: 123 gtttctagattttttt-aaaacaacttcaataatactgaaacctttttgttttaaataat 181
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtttctagatttttttaaaaacaacttcaataatactgaaacctttttgttttaaataat 382
Query: 182 gttgaaacaatgaaattgtttttaaaactacaaaaataataatgattgatgtgtgttaac 241
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 383 gttgaaacaatgaaattgtttttaaaactacaaaaataataatgattgatttgtgttaac 442
Query: 242 acagtacatttgctcatggaagctccaaagtactgatgtttaaggatgtcttagcaatgc 301
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 ccagtacatttgctcatggaagctccaaagtactgatgtttaaggatgccttagcaatgc 502
Query: 302 taggtgatcaaacaggaaggcaagtctttctagttttggtattatacagtggtgactcca 361
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 503 taggtgatcaaacaggaaggcaagtctttctagttttgttattatacagtggtgactcca 562
Query: 362 tataacctgatggctaagattctttctcagtgtgctgccatggaaacactacccaacagt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tataacctgatggctaagattctttctcagtgtgctgccatggaaacactacccaacagt 622
Query: 422 tctccaagagcagcaccatttagaacaaaatcccttccatgcctagtgataataaaatac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctccaagagcagcaccatttagaacaaaatcccttccatgcctagtgataataaaatac 682
Query: 482 acaagagagaaggtacatcacagagtcttgcttatcattcatcttgagtatttagtcata 541
|||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 683 acaagagacaaggtacagcatagagtcttgcttatcgttcatcctgagtatttagtcata 742
Query: 542 tctgcagttctcttttgaccttgtatttctgctcattcaaatatctcttgatctgaaatt 601
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 743 tctgcagttctctttggaccttgtatttctgctcattcaaatatcacttgatctgaaatt 802
Query: 602 aaataaatcctgttatcacatggattctatttaggacagtgacctcctatgagcggttac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaataaatcctgttatcacatggattctatttaggacagtgacctcctatgagcggttac 862
Query: 662 cttcaagttcctg 674
|||||||||||||
Sbjct: 863 cttcaagttcctg 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space: 707160
Effective search space used: 707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_c03.g1 MSMg01no052_c03.g1 CHROMAT_FILE:
MSMg01no052_c03.g1 PHD_FILE: MSMg01no052_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:39 2005
(634 letters)
>mm_chr14_10588652_10589685
Length = 1034
Score = 1085 bits (561), Expect = 0.0
Identities = 619/645 (95%), Gaps = 14/645 (2%)
Strand = Plus / Minus
Query: 1 actacatcaaagaatcagatcattaagagaaaacaggatacacaactggtgagaatcatg 60
|||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 891 actacatcaaaggatcagatcatcaaaagaaaacaggatacacaactggtgagaatcatg 832
Query: 61 tatgagccctatagcaaaagacacaacttctatgaagtctttatttttcttattagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tatgagccctatagcaaaagacacaacttctatgaagtctttatttttcttattagaatt 772
Query: 121 tactttaatagatgtcacaaaaggtca-----------aa-ttttttctgctatgtcact 168
||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 771 tactttaatagatgtcacaaaaggtcaatttttttctcaatttttttctgctatgtcact 712
Query: 169 tgagtatcttcagttgcttgttagtcatgtacaaacaagaataatgtgaatcacatggca 228
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 711 tgagtatcttcagttgcttgttagtcatgtataaacaagaataatgtgaatcacatggca 652
Query: 229 cttgatgtatgacatttatgacaaaagctcttctttaaagctccctcatcgtttcctgaa 288
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cttgatgtatgacatttatggcaaaagctcttctttaaagctccctcatcgtttcctgaa 592
Query: 289 taagactttgctgtgcagagtcccatatgatcttcatggtaaactcagtccctagacata 348
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taagattttgctgtgcagagtcccatatgatcttcatggtaaactcagtccctagacata 532
Query: 349 ccctacagtacagctagaaggtccctggtagtgaagatgaaaaatgcctgctctgagaca 408
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 531 ccctacagtacagctagaaggtccctagtagtgaagatgaaaaatgcctgctctgaggca 472
Query: 409 ctcttgttgctggtgttcctctgtcttctttcatgcttctcacaaggcaatcctttcatc 468
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 471 ctcttgttgctggtgttcctctgtcttctctcatgcttctcacaaggcaatcctttcatc 412
Query: 469 tcactgcgatggctatagtcaagcacccatgaggtatggtgcctaaagaatgggttatgt 528
||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 411 tcactgcgatggctatagttaagcacccataaggtatggtgcctaaagaatgggctatgt 352
Query: 529 gtgttccaaatataaaaaaataaaaaaagttcatttggcttatattcaatgttctttaca 588
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 351 gtgttccaaatataaaaaaat-aaaaaag-tcatttggcttatattcaatgttctttaca 294
Query: 589 taaataataataaattatcacttaagattaaatattttggcattt 633
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taaataataataaattatcacttaagattaaatattttggcattt 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
