Query= MSMg01no052_l03.b1 MSMg01no052_l03.b1 CHROMAT_FILE:
MSMg01no052_l03.b1 PHD_FILE: MSMg01no052_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:23 2005
(616 letters)
>mm_chr14_123867519_123868536
Length = 1018
Score = 1151 bits (595), Expect = 0.0
Identities = 610/615 (99%), Gaps = 2/615 (0%)
Strand = Plus / Minus
Query: 4 gaattctactcctcccccttc-ccttgacctctaaaagg-atactgaatgttatgaaaaa 61
||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 655 gaattctactcctccgtcttcaccttgacctctaaaaggtatactgaatgttatgaaaaa 596
Query: 62 tgatcttatcttcacatgaagccagaatttaatgatatagatcattgctttgatgaatag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgatcttatcttcacatgaagccagaatttaatgatatagatcattgctttgatgaatag 536
Query: 122 cataaaatggaaatctgcatccatcaattaccaagctttatttggaccactgcatacaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cataaaatggaaatctgcatccatcaattaccaagctttatttggaccactgcatacaaa 476
Query: 182 tactgatggtattttcactatagataacagactcctgttattaccactgtactgtgcagt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tactgatggtattttcactatagataacagactcctgttattaccactgtactgtgcagt 416
Query: 242 gactgccttacagatagatctctacagccaaggaactagtataaactaccaagcaattaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gactgccttacagatagatctctacagccaaggaactagtataaactaccaagcaattaa 356
Query: 302 aataaaagtatttcatttacagatatacacatttctaatgagacccagaagtctttacta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aataaaagtatttcatttacagatatacacatttctaatgagacccagaagtctttacta 296
Query: 362 aaaatatctaagtcaatctaagttatgtagacatataaaaccaatgagaaaaaccagcaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaatatctaagtcaatctaagttatgtagacatataaaaccaatgagaaaaaccagcaa 236
Query: 422 tttttctctcctctggaaataactatgtggaaacacacacactcacacacacatgtacac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tttttctctcctctggaaataactatgtggaaacacacacactcacacacacatgtacac 176
Query: 482 atatatgttatatgcatatgggaaatatacatatacacataaatacatgtataagtttta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atatatgttatatgcatatgggaaatatacatatacacataaatacatgtataagtttta 116
Query: 542 ctaaagaatatagaaagaggttaaaataaagaggaaaacagtattttctggcagtagtga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ctaaagaatatagaaagaggttaaaataaagaggaaaacagtattttctggcagtagtga 56
Query: 602 ctatattctggcttt 616
||| |||||||||||
Sbjct: 55 ctagattctggcttt 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1018
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1008
Effective search space: 610848
Effective search space used: 610848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_l03.g1 MSMg01no052_l03.g1 CHROMAT_FILE:
MSMg01no052_l03.g1 PHD_FILE: MSMg01no052_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:23 2005
(473 letters)
>mm_chr14_123700464_123701336
Length = 873
Score = 876 bits (453), Expect = 0.0
Identities = 468/473 (98%)
Strand = Plus / Plus
Query: 1 tcagtgtctgcgccaccacatggttcaaagacatctaaaaggacacatctttctctttct 60
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcagtgtctgctccaccacatggttcaaacacatctaaaaggacacatctttctctttct 260
Query: 61 gcctgatattaaactgaacactggagggttagagtgtctcgtttataaacatgctaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgatattaaactgaacactggagggttagagtgtctcgtttataaacatgctaaaaa 320
Query: 121 gtaaaatagagaggctgggtgacatgcttactgctgctctaagagaccatctttctgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaaatagagaggctgggtgacatgcttactgctgctctaagagaccatctttctgagg 380
Query: 181 gtttgagtagtattggggccaaagggagattttaaaattgtagtctatgaaaggctgagt 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttggagtagtattggggccaaagggagattttaaaattgtagtctatgaaaggctgagt 440
Query: 241 gaagtgaaacgctcattaggtgcacatcaaaggtggcagttgactaagttagtggcacta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagtgaaatgctcattaggtgcacatcaaaggtggcagttgactaagttagtggcacta 500
Query: 301 cacacattgagcctggggacagtgaatgatatagtctcacatgtagccacacaaactaag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacacattgagcctggggacagtgaatgatatagtctcacatgtagccacacaaactaaa 560
Query: 361 aagctctggcatgaacacatgggaatcagtcatcgctgtgcacaactgaacagcaggtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagctctggcatgaacacatgggaatcagtcatcgctgtgcacaactgaacagcaggtgc 620
Query: 421 ttcacaggcaaatggagtgtttcactttagaggttttaatgctcttacattag 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcacaggcaaatggagtgtttcactttagaggttttaatgctcttacattag 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
