Query= MSMg01no054_f20.b1 MSMg01no054_f20.b1 CHROMAT_FILE:
MSMg01no054_f20.b1 PHD_FILE: MSMg01no054_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:32 2005
(613 letters)
>mm_chr14_106335166_106336178
Length = 1013
Score = 1106 bits (572), Expect = 0.0
Identities = 604/622 (97%), Gaps = 12/622 (1%)
Strand = Plus / Plus
Query: 4 ggaattccatatactgctgcatgcctgtaattccagcacaagggagatcgagacaggaaa 63
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 192 ggaattccatatactggtgcatgcctgtaattctagcacaagggagatcgagacaggaaa 251
Query: 64 atggaaagtttaaggccaacctgagttgcatcacaagacttccatctcaaagacacacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atggaaagtttaaggccaacctgagttgcatcacaagacttccatctcaaagacacacac 311
Query: 124 acacacacacacac------------acacacacacggacatgccactggttgtatgcaa 171
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 312 acacacacacacacacacacacacatacacacacacggacatgccactggttgtatgcaa 371
Query: 172 atatgatgtttccacaaacaacttaaatacctttagattaggcaacactctgcttattca 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atatgatgtttccacaaacaacttaaatacctttagattaggcaacactctgcttattca 431
Query: 232 gttgaagcaaattctccccttggaattcaactttttctcagataggctggaagccagcca 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttgaagcaaattctccccttggaattcaactttttctcagataggctggaagccagcca 491
Query: 292 gctcctgtctgtaactcttttggagctggggtaataggtatgtgttggacttgttacatg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gctcctgtctgtaactcttttggagctggggtaataggtatgtgttggacttgttacatg 551
Query: 352 ggtgttggaatccaatctccgactctcatggttgtgtagcaaatggtcccaacactgaac 411
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 552 gctgttggaatccaatctctgattctcatggttgtgtagcaaatggtcccaacactgaac 611
Query: 412 tatctctgtagcccaaagaaacatgttttaggaccatagcaggttaactcatctccccta 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tatctctgtagcccaaagaaacatgttttaggaccatagcaggttaactcatctcccctt 671
Query: 472 taattcctagcttgagacatcacacagtttaggtacatcttttcgtaatctttcttctgt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 taattcctagcttgagacatcacacagtttaggtacatcttttcgtaatctttcttctgt 731
Query: 532 tgcgtgaagggaaatgagaaagacacttgcaaatgcgacttatcaaaggttgttttgttt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tgcgtgaagggaaatgagaaagacacttgcaaatgcgacttatcaaaggttgttttgttt 791
Query: 592 tgagaattccagtcacagtgtt 613
||||||||||||||||||||||
Sbjct: 792 tgagaattccagtcacagtgtt 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_f20.g1 MSMg01no054_f20.g1 CHROMAT_FILE:
MSMg01no054_f20.g1 PHD_FILE: MSMg01no054_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:32 2005
(209 letters)
>mm_chr14_106497424_106498032
Length = 609
Score = 356 bits (184), Expect = e-103
Identities = 203/210 (96%), Gaps = 2/210 (0%)
Strand = Plus / Minus
Query: 2 tattagaattaaaccatttaccctatggtcagggctgaggaagcagctgggagctcataa 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 314 tattagaattaaaccatttaccctatggtcagggctgaggaagcagatgggagctcataa 255
Query: 62 tcctctttaatcataccttcaatgattcaaaagcattttattaggctatcctttgacccg 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcctctttaatcataccttcaatgattcaaaagcattttattaggctatcctttgaccca 195
Query: 122 cgctaccgtc--gccagcaagaacgcacacaggacactcggatccttctgcagtaaagct 179
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 194 cgctaccgtctcgccagcaagaacgcacgtaggacactcggatccttctgcagtaaagct 135
Query: 180 ttaatgcatcttgagagatagatgatcagc 209
||||||||||| ||||||||||||||||||
Sbjct: 134 ttaatgcatctcgagagatagatgatcagc 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
