Query= MSMg01no055_g18.b1 MSMg01no055_g18.b1 CHROMAT_FILE:
MSMg01no055_g18.b1 PHD_FILE: MSMg01no055_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:49 2005
(313 letters)
>mm_chr14_10772387_10773099
Length = 713
Score = 503 bits (260), Expect = e-147
Identities = 295/312 (94%), Gaps = 12/312 (3%)
Strand = Plus / Minus
Query: 4 ggaattcaacat--ataccgaggataatatttacatactgggaaggggaaaatatcagcg 61
|||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |
Sbjct: 703 ggaattcaacataaata--gaggataatatttacatact-ggaaggggaaaatatcaggg 647
Query: 62 caataagtaccagacccaaaacgtcagtgggtttgccaacaagtcatagcaagttcttat 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 caataagtaccagagaaaaaacgtcagtgggtttgccaacaagtcatagcaagttcttat 587
Query: 122 aggacattccatccccactccccacccctgctacataattccaggacaatcataagcagt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aggacattccatccccactccccacccctgctacataattccaggacaatcataagcagt 527
Query: 182 gacattgtccaaaatgtgtcatctaaccttgaaatgggccaggtgtgatatgcaacccct 241
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 526 gacattgtccaaa-------atctaaccttgaagtgggccaggtgtgatatgcaacccct 474
Query: 242 tagagttgaaggttaatttccaaagtcccatcatttttgaaccaattgttaatgactaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tagagttgaaggttaatttccaaagtcccatcatttttgaaccaattgttaatgactaaa 414
Query: 302 tcttaatttggt 313
||||||||||||
Sbjct: 413 tcttaatttggt 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_g18.g1 MSMg01no055_g18.g1 CHROMAT_FILE:
MSMg01no055_g18.g1 PHD_FILE: MSMg01no055_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:49 2005
(393 letters)
>mm_chr14_10647677_10648469
Length = 793
Score = 745 bits (385), Expect = 0.0
Identities = 391/393 (99%)
Strand = Plus / Plus
Query: 1 ccccacaaatccaatctatgttatctattaagaagatgtccaacttgggccatatggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccacaaatccaatctatgttatctattaagaagatgtccaacttgggccatatggaag 260
Query: 61 tgttcaacaattgatatggattaacccctaactatatacctcagcaaaaggctgtaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttcaacaattgatatggattaacccctaactatatacctcagcaaaaggctgtaaagg 320
Query: 121 tggcctaaaagtgttgccaggacaagaaccttgacagtgccaagctggttgcccaaatgg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcctaaaagggttgccaggacaagaaccttgacagtgccaagctggttgcccaaatgg 380
Query: 181 tacccatgaactcaaacagatgctttgatataaaatactcaagggaagaaaggagaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacccatgaactcaaacagatgctttgatataaaatactcaagggaagaaaggagaataa 440
Query: 241 aacagtagttgtgttattaggcttgggtagatgactcaatagataagggtatttgctatt 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 aacagtagttgtgttattaggcttgggtaaatgactcaatagataagggtatttgctatt 500
Query: 301 taagaattaaggccgaagtcttgattgtcatcacccccacctcaacctaagccaggcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagaattaaggccgaagtcttgattgtcatcacccccacctcaacctaagccaggcatg 560
Query: 361 gccacatacacctgaaatcccagagttgtatga 393
|||||||||||||||||||||||||||||||||
Sbjct: 561 gccacatacacctgaaatcccagagttgtatga 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
